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The map label for this gene is ypnP [H]

Identifier: 238925693

GI number: 238925693

Start: 3169913

End: 3171238

Strand: Reverse

Name: ypnP [H]

Synonym: EUBREC_3350

Alternate gene names: 238925693

Gene position: 3171238-3169913 (Counterclockwise)

Preceding gene: 238925694

Following gene: 238925690

Centisome position: 91.93

GC content: 45.1

Gene sequence:

>1326_bases
ATGTCAAAAGATGAATACTTAATTACAGATGCCCCCTTAAAGGCATTGACAGTTTTTGCAATGCCTATGATTTTGGGCAG
CTTTTTTCAACAAGTATATAATATGGCTGATTCAATCATTGTTGGTCAGTTTGTAGGCTCCTCTGCACTTGCGGCAGTTG
GAGCCTGTGCTGCGCTTACGAATGTGTTCATTTGTATAGCACTGGGAGCCGGTGTAGGAGCGGGTGTACTTGTGAGCCGC
TATTTCGGCGCCAGGGATTACGGCAAAATGAAAACAATAGTATCAACATCACTGATTAGTTTTCTGGTTTTAAGCGTACT
TCTGGGTGTTTTTGGCTTTTTCTTTTCACATTCAATGATGAGCTTGCTACAGACACCTGCAGATATACTGGATGAGGCAG
TGCTGTATCTTAGGGTTTATTTTGTGGGATTTCCCTTTTTGTTTATGTACAACATACTTTCAACGATGTTTACATCGATT
GGCGAGTCAAGGATTCCGTTGGGGCTTTTGATATTTTCCTCTGTGTTAAATATATTTATGGACCTTTGGATGGTGGCAGG
CCTTGACCTGGGTGTGTTCGGTGCTGCCCTTGCAACTCTAATTGCTCAGGGAATCTCTGCAGTGTTTTCACTTTTGATTT
TCTTTAGCAGGATGCGCCGGTATAAAAGTCGCTTTGAATGGTTTGACAGGCATGAGCTTCATTCAATGCTTCGGATTGCT
GTGCCTTCGGTTCTCCAGCAGTCTACGGTGTCAATTGGCATGATGATAGTACAGGCAGTTGTGAATCCGTTCGGTACACA
GGCGCTTGCAGGATATTCGGCAACGATGAGGGTAGAGAATGTATTTTCACTGATATTTGTATCCATTGGAAATGCAGTTT
CTCCGTTTGTTTCCCAAAATCTCGGAGCAAAGAAGACAGAACGTATCAAAAAAGGCTATCACGCTGCGCTGGTGTTAGAC
CTGTGCTTTGCAGTGCTTGCCTTTATAGTCATTGAAACACTGCATACTCAGATTTCCTCATTATTCCTGGGCAAAGACGG
AACGGCCCTGGCATATCAGGTATCCGGAGATTATATGAGATGGCTTGGCTTCTTTTTCATTTTTATGGGTATCAAGATGG
CCACCGATGGTGTGCTTCGTGGACTTGGCATCATGCGTCCGTTTCTCGCTGCCAATATGGTAAACCTGGCAATCCGCCTG
TCGGTTGCCTTAATCTGTGCGCCGCGTTTCGGTATTGCATTTGTCTGGCTTGCTGTACCGGCCGGCTGGCTTGCCAATTT
CCTGATTTCCTATGTGGCTCTCAGAAAATCCTGGCCGGCGGAATAG

Upstream 100 bases:

>100_bases
GCATAAGAAATGGAAAAATGTCGATAAAGAATGCTATATTGTAATTTGTCTTTCAATCGGATATACTATAGCTTAATTAT
AGCGGAATGAGGGAAAAATA

Downstream 100 bases:

>100_bases
AAGTTACTATAATTCAAGCTTCAGATAAATCTCATCCCTCTCATCCTGCACTGTTTTGCCGGCAGCAGTCTTTACAATAC
GATATGCCTGCGTCCTGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 441; Mature: 440

Protein sequence:

>441_residues
MSKDEYLITDAPLKALTVFAMPMILGSFFQQVYNMADSIIVGQFVGSSALAAVGACAALTNVFICIALGAGVGAGVLVSR
YFGARDYGKMKTIVSTSLISFLVLSVLLGVFGFFFSHSMMSLLQTPADILDEAVLYLRVYFVGFPFLFMYNILSTMFTSI
GESRIPLGLLIFSSVLNIFMDLWMVAGLDLGVFGAALATLIAQGISAVFSLLIFFSRMRRYKSRFEWFDRHELHSMLRIA
VPSVLQQSTVSIGMMIVQAVVNPFGTQALAGYSATMRVENVFSLIFVSIGNAVSPFVSQNLGAKKTERIKKGYHAALVLD
LCFAVLAFIVIETLHTQISSLFLGKDGTALAYQVSGDYMRWLGFFFIFMGIKMATDGVLRGLGIMRPFLAANMVNLAIRL
SVALICAPRFGIAFVWLAVPAGWLANFLISYVALRKSWPAE

Sequences:

>Translated_441_residues
MSKDEYLITDAPLKALTVFAMPMILGSFFQQVYNMADSIIVGQFVGSSALAAVGACAALTNVFICIALGAGVGAGVLVSR
YFGARDYGKMKTIVSTSLISFLVLSVLLGVFGFFFSHSMMSLLQTPADILDEAVLYLRVYFVGFPFLFMYNILSTMFTSI
GESRIPLGLLIFSSVLNIFMDLWMVAGLDLGVFGAALATLIAQGISAVFSLLIFFSRMRRYKSRFEWFDRHELHSMLRIA
VPSVLQQSTVSIGMMIVQAVVNPFGTQALAGYSATMRVENVFSLIFVSIGNAVSPFVSQNLGAKKTERIKKGYHAALVLD
LCFAVLAFIVIETLHTQISSLFLGKDGTALAYQVSGDYMRWLGFFFIFMGIKMATDGVLRGLGIMRPFLAANMVNLAIRL
SVALICAPRFGIAFVWLAVPAGWLANFLISYVALRKSWPAE
>Mature_440_residues
SKDEYLITDAPLKALTVFAMPMILGSFFQQVYNMADSIIVGQFVGSSALAAVGACAALTNVFICIALGAGVGAGVLVSRY
FGARDYGKMKTIVSTSLISFLVLSVLLGVFGFFFSHSMMSLLQTPADILDEAVLYLRVYFVGFPFLFMYNILSTMFTSIG
ESRIPLGLLIFSSVLNIFMDLWMVAGLDLGVFGAALATLIAQGISAVFSLLIFFSRMRRYKSRFEWFDRHELHSMLRIAV
PSVLQQSTVSIGMMIVQAVVNPFGTQALAGYSATMRVENVFSLIFVSIGNAVSPFVSQNLGAKKTERIKKGYHAALVLDL
CFAVLAFIVIETLHTQISSLFLGKDGTALAYQVSGDYMRWLGFFFIFMGIKMATDGVLRGLGIMRPFLAANMVNLAIRLS
VALICAPRFGIAFVWLAVPAGWLANFLISYVALRKSWPAE

Specific function: Unknown

COG id: COG0534

COG function: function code V; Na+-driven multidrug efflux pump

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002528
- InterPro:   IPR015522 [H]

Pfam domain/function: PF01554 MatE [H]

EC number: NA

Molecular weight: Translated: 48230; Mature: 48099

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKDEYLITDAPLKALTVFAMPMILGSFFQQVYNMADSIIVGQFVGSSALAAVGACAALT
CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
NVFICIALGAGVGAGVLVSRYFGARDYGKMKTIVSTSLISFLVLSVLLGVFGFFFSHSMM
HHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLLQTPADILDEAVLYLRVYFVGFPFLFMYNILSTMFTSIGESRIPLGLLIFSSVLNIFM
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
DLWMVAGLDLGVFGAALATLIAQGISAVFSLLIFFSRMRRYKSRFEWFDRHELHSMLRIA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPSVLQQSTVSIGMMIVQAVVNPFGTQALAGYSATMRVENVFSLIFVSIGNAVSPFVSQN
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHCC
LGAKKTERIKKGYHAALVLDLCFAVLAFIVIETLHTQISSLFLGKDGTALAYQVSGDYMR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHH
WLGFFFIFMGIKMATDGVLRGLGIMRPFLAANMVNLAIRLSVALICAPRFGIAFVWLAVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
AGWLANFLISYVALRKSWPAE
HHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SKDEYLITDAPLKALTVFAMPMILGSFFQQVYNMADSIIVGQFVGSSALAAVGACAALT
CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
NVFICIALGAGVGAGVLVSRYFGARDYGKMKTIVSTSLISFLVLSVLLGVFGFFFSHSMM
HHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLLQTPADILDEAVLYLRVYFVGFPFLFMYNILSTMFTSIGESRIPLGLLIFSSVLNIFM
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
DLWMVAGLDLGVFGAALATLIAQGISAVFSLLIFFSRMRRYKSRFEWFDRHELHSMLRIA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPSVLQQSTVSIGMMIVQAVVNPFGTQALAGYSATMRVENVFSLIFVSIGNAVSPFVSQN
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHCC
LGAKKTERIKKGYHAALVLDLCFAVLAFIVIETLHTQISSLFLGKDGTALAYQVSGDYMR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHH
WLGFFFIFMGIKMATDGVLRGLGIMRPFLAANMVNLAIRLSVALICAPRFGIAFVWLAVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
AGWLANFLISYVALRKSWPAE
HHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]