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The map label for this gene is yitS [H]

Identifier: 238925695

GI number: 238925695

Start: 3172104

End: 3172952

Strand: Reverse

Name: yitS [H]

Synonym: EUBREC_3352

Alternate gene names: 238925695

Gene position: 3172952-3172104 (Counterclockwise)

Preceding gene: 238925696

Following gene: 238925694

Centisome position: 91.98

GC content: 40.99

Gene sequence:

>849_bases
ATGGTAAAAATTATATCTGACAGTACATGTGATCTGTCACAGGAAGTTTTAGAAAGATACGATATAGATATTATTCCGCT
TCATATTGTAAAAGGAGATGAAGAACTGGAGGACGGACCGCAGATAGACATTCACGCATTGTATGAGTGGGCTGATAAAA
ATAAGACTACACCAAAGACTTCAGCTCCATCTATAGAAACAGCAATGAATGTAATGCGACCATATATTGATGAAGGCAGG
GAGATCATATGCTTTTCCATATCAAGTGAGATGTCGACATCAATCAACGTGATCAGAATGGCGGCAGAAGAACTTGATGC
AGAGGATAAGGTTACGATAATAGATTCAAGAAATCTGTCCACAGGAATAGGCCTGCTTGTTGTTGAGGCGGCAGTTATGG
CAGCAGAGGGGAAATCCCGTGAGGAGATAAAAACCGGAATTGATGAATTGATCCCGAAGGTAAGAGCGAGCTTTGTTGTA
GATACACTTGTGTACCTTTACAGAGGTGGTAGATGCAATGCGGTTTCTGCGCTTATCGGAGGAGCATTGGCGCTTCATCC
CATGATCGTTGTAAAGGATGGTAAAATGGATGCAAGCAGGAAATATAGAGGTAAGATCGGTAAAGTCATAAAGAATTATG
CAAAAGATCTGGAAGAGGACCTGAAAAACGCAATACCGGATCGGGTATTTATTACACATTCGGAATGTGATGCTAAGACA
GTTGAAGAGGTAAGGGATTACATAGCCTCTCTTGGCATTTTTAAGGAAATAATAGAGACAAGAGCAGGTGGTGTGATTTC
ATCACATTGTGGACCTGGCACACTCGGAGTGTTATTTATTGCAAAATAA

Upstream 100 bases:

>100_bases
AAAATAATATATTTATTCCGCAATTGAAATAATAAAATAAGATAGTATAATGGAACAGAAAGGAAGGACAAAATGATTTT
GAAAGCCTGGAGGTGTTAAA

Downstream 100 bases:

>100_bases
TGGAGTTCCATATGGTAAGTGCGTTGAAGCTGCTCGGAAAATATAAACATTTTATAAATTATTAGCACTCGCTATTGACG
AGTGCTAATAATAGGCGTAT

Product: DegV protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MVKIISDSTCDLSQEVLERYDIDIIPLHIVKGDEELEDGPQIDIHALYEWADKNKTTPKTSAPSIETAMNVMRPYIDEGR
EIICFSISSEMSTSINVIRMAAEELDAEDKVTIIDSRNLSTGIGLLVVEAAVMAAEGKSREEIKTGIDELIPKVRASFVV
DTLVYLYRGGRCNAVSALIGGALALHPMIVVKDGKMDASRKYRGKIGKVIKNYAKDLEEDLKNAIPDRVFITHSECDAKT
VEEVRDYIASLGIFKEIIETRAGGVISSHCGPGTLGVLFIAK

Sequences:

>Translated_282_residues
MVKIISDSTCDLSQEVLERYDIDIIPLHIVKGDEELEDGPQIDIHALYEWADKNKTTPKTSAPSIETAMNVMRPYIDEGR
EIICFSISSEMSTSINVIRMAAEELDAEDKVTIIDSRNLSTGIGLLVVEAAVMAAEGKSREEIKTGIDELIPKVRASFVV
DTLVYLYRGGRCNAVSALIGGALALHPMIVVKDGKMDASRKYRGKIGKVIKNYAKDLEEDLKNAIPDRVFITHSECDAKT
VEEVRDYIASLGIFKEIIETRAGGVISSHCGPGTLGVLFIAK
>Mature_282_residues
MVKIISDSTCDLSQEVLERYDIDIIPLHIVKGDEELEDGPQIDIHALYEWADKNKTTPKTSAPSIETAMNVMRPYIDEGR
EIICFSISSEMSTSINVIRMAAEELDAEDKVTIIDSRNLSTGIGLLVVEAAVMAAEGKSREEIKTGIDELIPKVRASFVV
DTLVYLYRGGRCNAVSALIGGALALHPMIVVKDGKMDASRKYRGKIGKVIKNYAKDLEEDLKNAIPDRVFITHSECDAKT
VEEVRDYIASLGIFKEIIETRAGGVISSHCGPGTLGVLFIAK

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 30932; Mature: 30932

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKIISDSTCDLSQEVLERYDIDIIPLHIVKGDEELEDGPQIDIHALYEWADKNKTTPKT
CEEEECCCCCCHHHHHHHHHCCCEEEEEEECCCHHHCCCCCEEHHHHHHHHCCCCCCCCC
SAPSIETAMNVMRPYIDEGREIICFSISSEMSTSINVIRMAAEELDAEDKVTIIDSRNLS
CCCHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCC
TGIGLLVVEAAVMAAEGKSREEIKTGIDELIPKVRASFVVDTLVYLYRGGRCNAVSALIG
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
GALALHPMIVVKDGKMDASRKYRGKIGKVIKNYAKDLEEDLKNAIPDRVFITHSECDAKT
HHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHH
VEEVRDYIASLGIFKEIIETRAGGVISSHCGPGTLGVLFIAK
HHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEEEC
>Mature Secondary Structure
MVKIISDSTCDLSQEVLERYDIDIIPLHIVKGDEELEDGPQIDIHALYEWADKNKTTPKT
CEEEECCCCCCHHHHHHHHHCCCEEEEEEECCCHHHCCCCCEEHHHHHHHHCCCCCCCCC
SAPSIETAMNVMRPYIDEGREIICFSISSEMSTSINVIRMAAEELDAEDKVTIIDSRNLS
CCCHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCC
TGIGLLVVEAAVMAAEGKSREEIKTGIDELIPKVRASFVVDTLVYLYRGGRCNAVSALIG
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
GALALHPMIVVKDGKMDASRKYRGKIGKVIKNYAKDLEEDLKNAIPDRVFITHSECDAKT
HHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHH
VEEVRDYIASLGIFKEIIETRAGGVISSHCGPGTLGVLFIAK
HHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9025291; 9353931; 9384377 [H]