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The map label for this gene is ydiM [H]

Identifier: 238925188

GI number: 238925188

Start: 2723760

End: 2724971

Strand: Reverse

Name: ydiM [H]

Synonym: EUBREC_2842

Alternate gene names: 238925188

Gene position: 2724971-2723760 (Counterclockwise)

Preceding gene: 238925189

Following gene: 238925187

Centisome position: 78.99

GC content: 43.89

Gene sequence:

>1212_bases
ATGAATAAAAAATATTTACCTAGCGCATTAATCCTTTACTTAAACTACTTTATACACGGAGTGGGCTGCTCTATCCTCGG
ACAGGCAGTCATCAAGGAGGCTCTCGCGGCTTCATGGGGAGTGCAGGTTATGGCTATTACAGCTATTTCAGCAGCCCTGG
GACTTGGACGTCTTATCGCACTTCCGTTTGCAGGACCTTTATCAGATAAGCTCGGACGCCGTATCTCAACAGCAATCGGA
AGCGGCTCTTATGCTATCTACCTGATCGGACTTGCCCTTGCATTCAATGCAGGAACACATGGTGGATACCAGATTGCTTA
TATCTGTGCTATCATTGGCGGTATTGCGAACTCATTCCTTGATACAGGAATTTACCCTGCAGTATCAGAAATCATCTACA
AAGCACCGGGTGTTGCGACAATGGGAATCAAATTCTTCATCGCTATCGCACAGATGCTTTTACCATTCGTACTTGGTATG
ACAGTTGCTACAACAGCAGCAGGACTTACATCATACAACACACTGTTCTTCGGATGTGGAATCATCTACATTGTACTTTT
AGTATTAGTAATGATCTTCCCGCTTCCTGATAGCGATGCAAAGGCAGAGGGAAAGAAAGAAGGACTTATCGCAAGCTTAA
AGCACACACATTTTTCTGTTGAGTCAATCGCAATGATTATCATTGGATTTACATGTACAGGAACCTTCCAGTTATGGCTC
AACTGTGCACAGAACTTTGCAAAAGAGAACGTAGGCTGGGCTGATCCGTCAGTTATGCAGTCATACTACTCAGCAGGAAC
CATGATAGCTCTTATCGTAACTGCACTTTTAACAAGAAAAATCAAGGACGTCAGATTTATCCTTGTTTACCCTGTAATCT
GCCTTGCAACAATGGTAGTAGTGTTAGTCGGACAGACAAAGCCACTCATGATCGCAGGTGCATTCATCATCGGATGGGCA
GGAGCAGGCGGACTTTTACAGATCGTAACATCTGTATGCAACATGCTCTTCCCTAAGATCAAGGGAACAGTAACAGCGCT
TGTAATGATCGCTTCATCACTTTGTAACTACACAATCCTTACAGCAGCATCAAAGATGCAGCCATCACAGGTTATGGTAA
TGAACATCGTGCTCACAGCAATCGGCGTGGTACTTGGATTATTCGTAAACCTGCGCTATACTAAGATGGTAGAGCTGTCT
AAAGAGGATTAA

Upstream 100 bases:

>100_bases
GAGCATATGAAGGAAGTATTAAACATCAGATATGATGATTAATCAGACACAGAAATTAAATCACATTGAATTATTTTGAC
AGAAATTAAGGAGAACACTG

Downstream 100 bases:

>100_bases
TACGTTACATTATACTGGGGAGTATAATTATCATACAGTTAAAGTAAGAAAGGAAAAAATCATGAACACCATTAAGGTTA
GAGATATTGAAATCGGTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MNKKYLPSALILYLNYFIHGVGCSILGQAVIKEALAASWGVQVMAITAISAALGLGRLIALPFAGPLSDKLGRRISTAIG
SGSYAIYLIGLALAFNAGTHGGYQIAYICAIIGGIANSFLDTGIYPAVSEIIYKAPGVATMGIKFFIAIAQMLLPFVLGM
TVATTAAGLTSYNTLFFGCGIIYIVLLVLVMIFPLPDSDAKAEGKKEGLIASLKHTHFSVESIAMIIIGFTCTGTFQLWL
NCAQNFAKENVGWADPSVMQSYYSAGTMIALIVTALLTRKIKDVRFILVYPVICLATMVVVLVGQTKPLMIAGAFIIGWA
GAGGLLQIVTSVCNMLFPKIKGTVTALVMIASSLCNYTILTAASKMQPSQVMVMNIVLTAIGVVLGLFVNLRYTKMVELS
KED

Sequences:

>Translated_403_residues
MNKKYLPSALILYLNYFIHGVGCSILGQAVIKEALAASWGVQVMAITAISAALGLGRLIALPFAGPLSDKLGRRISTAIG
SGSYAIYLIGLALAFNAGTHGGYQIAYICAIIGGIANSFLDTGIYPAVSEIIYKAPGVATMGIKFFIAIAQMLLPFVLGM
TVATTAAGLTSYNTLFFGCGIIYIVLLVLVMIFPLPDSDAKAEGKKEGLIASLKHTHFSVESIAMIIIGFTCTGTFQLWL
NCAQNFAKENVGWADPSVMQSYYSAGTMIALIVTALLTRKIKDVRFILVYPVICLATMVVVLVGQTKPLMIAGAFIIGWA
GAGGLLQIVTSVCNMLFPKIKGTVTALVMIASSLCNYTILTAASKMQPSQVMVMNIVLTAIGVVLGLFVNLRYTKMVELS
KED
>Mature_403_residues
MNKKYLPSALILYLNYFIHGVGCSILGQAVIKEALAASWGVQVMAITAISAALGLGRLIALPFAGPLSDKLGRRISTAIG
SGSYAIYLIGLALAFNAGTHGGYQIAYICAIIGGIANSFLDTGIYPAVSEIIYKAPGVATMGIKFFIAIAQMLLPFVLGM
TVATTAAGLTSYNTLFFGCGIIYIVLLVLVMIFPLPDSDAKAEGKKEGLIASLKHTHFSVESIAMIIIGFTCTGTFQLWL
NCAQNFAKENVGWADPSVMQSYYSAGTMIALIVTALLTRKIKDVRFILVYPVICLATMVVVLVGQTKPLMIAGAFIIGWA
GAGGLLQIVTSVCNMLFPKIKGTVTALVMIASSLCNYTILTAASKMQPSQVMVMNIVLTAIGVVLGLFVNLRYTKMVELS
KED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787981, Length=409, Percent_Identity=30.0733496332518, Blast_Score=153, Evalue=2e-38,
Organism=Escherichia coli, GI226510946, Length=418, Percent_Identity=26.555023923445, Blast_Score=129, Evalue=4e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42789; Mature: 42789

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC
>Mature Secondary Structure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HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]