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The map label for this gene is yloC [H]

Identifier: 238924034

GI number: 238924034

Start: 1556979

End: 1557998

Strand: Direct

Name: yloC [H]

Synonym: EUBREC_1672

Alternate gene names: 238924034

Gene position: 1556979-1557998 (Clockwise)

Preceding gene: 238924032

Following gene: 238924035

Centisome position: 45.13

GC content: 40.49

Gene sequence:

>1020_bases
ATGATGTTCCTCCTTATTTCCTGTAAATATTCTAAGTTGCTGAATATTTATAATCATGAATATTTATATTATAATATATT
TGACGAAAATCTCAAGGAGTTATATAATAAACTCATCTATGCATATGCGAAAGGAAAAATTATGATTAAAAGTATGACCG
GCTTTGGCAGATACGAGTACGCAGATGCAAGCCGTAAGATTACAGTTGAGGTAAAATCTGTAAATCACAGATATCTGGAT
GTCAATATCAAGATGCCCAAAAAGCTCAATTTCTTCGAGAGTGCAATAAGGACTCTGCTTAAGGAGTACATAGAGCGTGG
CAAGGTTGACATTTATATCACATATGAGGATTTTACAGAAAATAATCTCTCATTGCAGTATAATAAGGCTCTCGCGGGAG
AATATCTTAAGTATCTTAATCAGATGGCGGAGGAATTCGGACTGGAGAATGATATAAGAGTGAGCACGCTGTCGAGATAT
CCGGAGGTATTTGCGATGGAGGAGCAGCCTGTAGATGAGGATGAGCTGTGGAGCAGTCTTGAGAAGGCTCTTCGCGGTGC
ATTTGAGCCATTTGTTGAAAGCCGCGTGCGCGAGGGAGAAAATCTTAAAAAAGACCTTTGCGAAAAGCTCGATAATATGG
TATCATATGTTGATTTCATTGAGGAGCGTTCGCCACAGATTATTGTCGAATACCGTGCGCGTCTTGAGGAAAAGCTAAGA
GAGCTGCTTGCAGACAATCAGCTTGATGATTCAAGAATAGCCCAGGAGGTCACTATTTTTGCGGACAAGATCTGTGTGGA
TGAGGAGACAGTCAGGCTCAAAAGCCATATCCTTTCCATGAAGGATTCGCTAAATGCCGGTGGCAGTGTGGGAAGAAAGC
TTGATTTCCTCGCACAGGAGATGAACCGTGAGGCGAATACCATCCTTTCAAAGTCCAATGATCTTAAGATTTCTGACACA
GGCATCAGTCTTAAAACTGATATAGAAAAGGTCAGGGAACAGATTCAAAATATTGAGTAA

Upstream 100 bases:

>100_bases
CTCATCTGCCTCAGGTTCTGCGATTTTACTGATTTTTGAGTTTAGTATCGTACTGTTTAGCTCTGCAACTATATTTGAAA
TGACTATTCCGTCTAAAGCC

Downstream 100 bases:

>100_bases
TTTTAGGAGATTGTGATGAGTAACACAGGAAAATTAGTTGTTTTTTCAGGCTTTTCGGGTTCCGGAAAGGGTACTATCAT
GAAGGAGCTTATGGCAAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MMFLLISCKYSKLLNIYNHEYLYYNIFDENLKELYNKLIYAYAKGKIMIKSMTGFGRYEYADASRKITVEVKSVNHRYLD
VNIKMPKKLNFFESAIRTLLKEYIERGKVDIYITYEDFTENNLSLQYNKALAGEYLKYLNQMAEEFGLENDIRVSTLSRY
PEVFAMEEQPVDEDELWSSLEKALRGAFEPFVESRVREGENLKKDLCEKLDNMVSYVDFIEERSPQIIVEYRARLEEKLR
ELLADNQLDDSRIAQEVTIFADKICVDEETVRLKSHILSMKDSLNAGGSVGRKLDFLAQEMNREANTILSKSNDLKISDT
GISLKTDIEKVREQIQNIE

Sequences:

>Translated_339_residues
MMFLLISCKYSKLLNIYNHEYLYYNIFDENLKELYNKLIYAYAKGKIMIKSMTGFGRYEYADASRKITVEVKSVNHRYLD
VNIKMPKKLNFFESAIRTLLKEYIERGKVDIYITYEDFTENNLSLQYNKALAGEYLKYLNQMAEEFGLENDIRVSTLSRY
PEVFAMEEQPVDEDELWSSLEKALRGAFEPFVESRVREGENLKKDLCEKLDNMVSYVDFIEERSPQIIVEYRARLEEKLR
ELLADNQLDDSRIAQEVTIFADKICVDEETVRLKSHILSMKDSLNAGGSVGRKLDFLAQEMNREANTILSKSNDLKISDT
GISLKTDIEKVREQIQNIE
>Mature_339_residues
MMFLLISCKYSKLLNIYNHEYLYYNIFDENLKELYNKLIYAYAKGKIMIKSMTGFGRYEYADASRKITVEVKSVNHRYLD
VNIKMPKKLNFFESAIRTLLKEYIERGKVDIYITYEDFTENNLSLQYNKALAGEYLKYLNQMAEEFGLENDIRVSTLSRY
PEVFAMEEQPVDEDELWSSLEKALRGAFEPFVESRVREGENLKKDLCEKLDNMVSYVDFIEERSPQIIVEYRARLEEKLR
ELLADNQLDDSRIAQEVTIFADKICVDEETVRLKSHILSMKDSLNAGGSVGRKLDFLAQEMNREANTILSKSNDLKISDT
GISLKTDIEKVREQIQNIE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=292, Percent_Identity=34.5890410958904, Blast_Score=155, Evalue=3e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 39692; Mature: 39692

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMFLLISCKYSKLLNIYNHEYLYYNIFDENLKELYNKLIYAYAKGKIMIKSMTGFGRYEY
CEEEEEECCHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEE
ADASRKITVEVKSVNHRYLDVNIKMPKKLNFFESAIRTLLKEYIERGKVDIYITYEDFTE
CCCCCEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCC
NNLSLQYNKALAGEYLKYLNQMAEEFGLENDIRVSTLSRYPEVFAMEEQPVDEDELWSSL
CCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHEECCCCCCCHHHHHHHH
EKALRGAFEPFVESRVREGENLKKDLCEKLDNMVSYVDFIEERSPQIIVEYRARLEEKLR
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
ELLADNQLDDSRIAQEVTIFADKICVDEETVRLKSHILSMKDSLNAGGSVGRKLDFLAQE
HHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
MNREANTILSKSNDLKISDTGISLKTDIEKVREQIQNIE
HCCHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMFLLISCKYSKLLNIYNHEYLYYNIFDENLKELYNKLIYAYAKGKIMIKSMTGFGRYEY
CEEEEEECCHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEE
ADASRKITVEVKSVNHRYLDVNIKMPKKLNFFESAIRTLLKEYIERGKVDIYITYEDFTE
CCCCCEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCC
NNLSLQYNKALAGEYLKYLNQMAEEFGLENDIRVSTLSRYPEVFAMEEQPVDEDELWSSL
CCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHEECCCCCCCHHHHHHHH
EKALRGAFEPFVESRVREGENLKKDLCEKLDNMVSYVDFIEERSPQIIVEYRARLEEKLR
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
ELLADNQLDDSRIAQEVTIFADKICVDEETVRLKSHILSMKDSLNAGGSVGRKLDFLAQE
HHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
MNREANTILSKSNDLKISDTGISLKTDIEKVREQIQNIE
HCCHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]