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The map label for this gene is 238923876

Identifier: 238923876

GI number: 238923876

Start: 1385984

End: 1386328

Strand: Direct

Name: 238923876

Synonym: EUBREC_1504

Alternate gene names: NA

Gene position: 1385984-1386328 (Clockwise)

Preceding gene: 238923875

Following gene: 238923877

Centisome position: 40.18

GC content: 38.55

Gene sequence:

>345_bases
ATGGAAGAAAAACTTGAACAGGCATATTTATATGATTTCTACGGTGAGCTTTTGAATGAGCATCAGCGTCAGGTATATGA
GGATTTTGTCTTCAATGATTTGTCACTCGGTGAGATTGCATCCGAGGAGGGGATTTCCCGTCAGGGTGTTGCCGATCTGA
TTAAGAGATGCAATAAGAAGCTGCTTGACTATGAGGCAAAGTTGCATCTTGTTGAAAAGTTCATGTCCATAAAGAGTGAC
ATACGAAGGATTCATGAGCTGACAAATGATTTTAAGAAATCACATAATGAGCTATTAATGAATGAAATCGAAGCTATTTC
GAATCAGATACTAGAGGAGCTGTAA

Upstream 100 bases:

>100_bases
ACTATGATATAAAAATAAAAGTATCAAGTATTTTTACTTGACACCGGGCAAACTATGTGTTATTCTACCATAGGTTCGAG
GGAAAAAGAGGATACTTGAT

Downstream 100 bases:

>100_bases
TATGGCATTTGACAGTTTATCAGAAAAACTGCAGAACGTTTTTAAGAATCTCCGCAGCAAGGGAAAGCTTACTGAGGATG
ATGTAAAGGCTGCTCTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MEEKLEQAYLYDFYGELLNEHQRQVYEDFVFNDLSLGEIASEEGISRQGVADLIKRCNKKLLDYEAKLHLVEKFMSIKSD
IRRIHELTNDFKKSHNELLMNEIEAISNQILEEL

Sequences:

>Translated_114_residues
MEEKLEQAYLYDFYGELLNEHQRQVYEDFVFNDLSLGEIASEEGISRQGVADLIKRCNKKLLDYEAKLHLVEKFMSIKSD
IRRIHELTNDFKKSHNELLMNEIEAISNQILEEL
>Mature_114_residues
MEEKLEQAYLYDFYGELLNEHQRQVYEDFVFNDLSLGEIASEEGISRQGVADLIKRCNKKLLDYEAKLHLVEKFMSIKSD
IRRIHELTNDFKKSHNELLMNEIEAISNQILEEL

Specific function: Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein

COG id: COG2739

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0122 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1504_EUBR3 (C4Z927)

Other databases:

- EMBL:   CP001107
- RefSeq:   YP_002937392.1
- GeneID:   7965471
- GenomeReviews:   CP001107_GR
- KEGG:   ere:EUBREC_1504
- ProtClustDB:   CLSK2506225
- HAMAP:   MF_00245
- InterPro:   IPR013324
- InterPro:   IPR007394
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10

Pfam domain/function: PF04297 UPF0122; SSF88659 Sigma_r3_r4

EC number: NA

Molecular weight: Translated: 13509; Mature: 13509

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEKLEQAYLYDFYGELLNEHQRQVYEDFVFNDLSLGEIASEEGISRQGVADLIKRCNKK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHH
LLDYEAKLHLVEKFMSIKSDIRRIHELTNDFKKSHNELLMNEIEAISNQILEEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MEEKLEQAYLYDFYGELLNEHQRQVYEDFVFNDLSLGEIASEEGISRQGVADLIKRCNKK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHH
LLDYEAKLHLVEKFMSIKSDIRRIHELTNDFKKSHNELLMNEIEAISNQILEEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA