| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238923741
Identifier: 238923741
GI number: 238923741
Start: 1235524
End: 1236702
Strand: Direct
Name: 238923741
Synonym: EUBREC_1363
Alternate gene names: NA
Gene position: 1235524-1236702 (Clockwise)
Preceding gene: 238923740
Following gene: 238923742
Centisome position: 35.82
GC content: 43.6
Gene sequence:
>1179_bases ATGGCAGATATCATGGATTATATTGACTGGCGTGGAGATATAGGCTTTGATGAGGTGCATGTAAATGAGGTGGACGGACT GATTTTTTCACAGCTTATTTATGTGCAGATGAAGCCATATATGCCGGATGCAAAGAAGTCATACCTTACGATAAAACAGC TTTCAAGCCTTTACTGCGCGGACCACAGTGATGATGAGATTGAGCAGATGCCTAATCTTTTCCGCCACTCCGCGAGGCTG CTTCAAAAGCTGGCGCACTCAAGGCGCTATGCTGACTGCATTTTGAGATATTATATATACGATATTAGTGAAAAAGAGGA GTCGCAGTTTTCTGCGGTTACGATAGAACTGCCTGACGGCACATATTTCATTTCCTACAGTGGTACAGACCATTCCGTGG TCGGCTGGAAGGAAAACTTTAATCTAAGCTATCTCGATGAGACACCGGGACAGAACAAGGCGAAAAAATATTTAAAGCAG ATGGCAGCATATATATGCAATGATGATAGGGGCATAAATGAAAAAGCCGTAAATGATAAAGCTTTAGATGATGAAAATAT CAACAATAAAAGCATCAATACAAGAAAGCTGTGGATAGGCGGGCACTCAAAGGGTGGAAATCTGGCAGTGTTTGCCGCCA TGCATGTGGATAAAGAGGTGCAGGATGTCATTATAAAGGTTTATAATTTTGATGGGCCGGGCTTCAATCACAAGATGATA TATACGGCAGGCTACAAAAGAATTTTTGACAGAATAGAGACATTTCTGCCGCAGTCGTCTATTGTTGGCTTATTGCTTGA GCATGTGGACGATTATGAGGTGGTAAGAAGCCATAATTCGGGGCCGCTGCAACATGATGCTTTTTCCTGGGAGATAATGG GCGGAAGTATCATAAAGGCGGATGGGCTGGACAAAAACAGTGTGCGCCTTGACAAGACACTCAGAAACTGGATAGGCAGC ATGGATGAGGCGCAGCGAAAGCAGTTTGTAAATGTGCTTTTTTCAATAGCATCGGACTCCAATTTTGAGAACCTTGACCA GATGTCATTTAAGCAGCTCATTGAGATGATAAAGGCTGCCGATGATCTGTCAAAGGCTGACTGGAGCATGCTTAAGGATA CAGTAAGACTCCTGATTTCTGCCGGTGTCGGCGTGGTCAGGGATGAAAAGGAGAAATAA
Upstream 100 bases:
>100_bases AAATCTGGCTACGGTTGTAGCATATAAAAAGGATGGCATAAAGCACAGCTTCCTAGATCACTATGATGAATAAGACAGAT ATATTTCAGGAGGGCATTGT
Downstream 100 bases:
>100_bases ATGTTAAATCAGTTTTCAAGAACACAGCTTTTGCTTGGAAAAGAGGCGATGGATAGGCTAAAGGGCGCAAGAGTCGCAGT ATTTGGAATAGGAGGAGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MADIMDYIDWRGDIGFDEVHVNEVDGLIFSQLIYVQMKPYMPDAKKSYLTIKQLSSLYCADHSDDEIEQMPNLFRHSARL LQKLAHSRRYADCILRYYIYDISEKEESQFSAVTIELPDGTYFISYSGTDHSVVGWKENFNLSYLDETPGQNKAKKYLKQ MAAYICNDDRGINEKAVNDKALDDENINNKSINTRKLWIGGHSKGGNLAVFAAMHVDKEVQDVIIKVYNFDGPGFNHKMI YTAGYKRIFDRIETFLPQSSIVGLLLEHVDDYEVVRSHNSGPLQHDAFSWEIMGGSIIKADGLDKNSVRLDKTLRNWIGS MDEAQRKQFVNVLFSIASDSNFENLDQMSFKQLIEMIKAADDLSKADWSMLKDTVRLLISAGVGVVRDEKEK
Sequences:
>Translated_392_residues MADIMDYIDWRGDIGFDEVHVNEVDGLIFSQLIYVQMKPYMPDAKKSYLTIKQLSSLYCADHSDDEIEQMPNLFRHSARL LQKLAHSRRYADCILRYYIYDISEKEESQFSAVTIELPDGTYFISYSGTDHSVVGWKENFNLSYLDETPGQNKAKKYLKQ MAAYICNDDRGINEKAVNDKALDDENINNKSINTRKLWIGGHSKGGNLAVFAAMHVDKEVQDVIIKVYNFDGPGFNHKMI YTAGYKRIFDRIETFLPQSSIVGLLLEHVDDYEVVRSHNSGPLQHDAFSWEIMGGSIIKADGLDKNSVRLDKTLRNWIGS MDEAQRKQFVNVLFSIASDSNFENLDQMSFKQLIEMIKAADDLSKADWSMLKDTVRLLISAGVGVVRDEKEK >Mature_391_residues ADIMDYIDWRGDIGFDEVHVNEVDGLIFSQLIYVQMKPYMPDAKKSYLTIKQLSSLYCADHSDDEIEQMPNLFRHSARLL QKLAHSRRYADCILRYYIYDISEKEESQFSAVTIELPDGTYFISYSGTDHSVVGWKENFNLSYLDETPGQNKAKKYLKQM AAYICNDDRGINEKAVNDKALDDENINNKSINTRKLWIGGHSKGGNLAVFAAMHVDKEVQDVIIKVYNFDGPGFNHKMIY TAGYKRIFDRIETFLPQSSIVGLLLEHVDDYEVVRSHNSGPLQHDAFSWEIMGGSIIKADGLDKNSVRLDKTLRNWIGSM DEAQRKQFVNVLFSIASDSNFENLDQMSFKQLIEMIKAADDLSKADWSMLKDTVRLLISAGVGVVRDEKEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44841; Mature: 44710
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADIMDYIDWRGDIGFDEVHVNEVDGLIFSQLIYVQMKPYMPDAKKSYLTIKQLSSLYCA CCCHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHCC DHSDDEIEQMPNLFRHSARLLQKLAHSRRYADCILRYYIYDISEKEESQFSAVTIELPDG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCC TYFISYSGTDHSVVGWKENFNLSYLDETPGQNKAKKYLKQMAAYICNDDRGINEKAVNDK EEEEEECCCCCCEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCC ALDDENINNKSINTRKLWIGGHSKGGNLAVFAAMHVDKEVQDVIIKVYNFDGPGFNHKMI CCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCHHHHHHHHEEEECCCCCCCCEEE YTAGYKRIFDRIETFLPQSSIVGLLLEHVDDYEVVRSHNSGPLQHDAFSWEIMGGSIIKA EEHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCEEEEEECCEEEEE DGLDKNSVRLDKTLRNWIGSMDEAQRKQFVNVLFSIASDSNFENLDQMSFKQLIEMIKAA CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH DDLSKADWSMLKDTVRLLISAGVGVVRDEKEK HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure ADIMDYIDWRGDIGFDEVHVNEVDGLIFSQLIYVQMKPYMPDAKKSYLTIKQLSSLYCA CCHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHCC DHSDDEIEQMPNLFRHSARLLQKLAHSRRYADCILRYYIYDISEKEESQFSAVTIELPDG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCC TYFISYSGTDHSVVGWKENFNLSYLDETPGQNKAKKYLKQMAAYICNDDRGINEKAVNDK EEEEEECCCCCCEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCC ALDDENINNKSINTRKLWIGGHSKGGNLAVFAAMHVDKEVQDVIIKVYNFDGPGFNHKMI CCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCHHHHHHHHEEEECCCCCCCCEEE YTAGYKRIFDRIETFLPQSSIVGLLLEHVDDYEVVRSHNSGPLQHDAFSWEIMGGSIIKA EEHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCEEEEEECCEEEEE DGLDKNSVRLDKTLRNWIGSMDEAQRKQFVNVLFSIASDSNFENLDQMSFKQLIEMIKAA CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH DDLSKADWSMLKDTVRLLISAGVGVVRDEKEK HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA