| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is ppsA [H]
Identifier: 238923407
GI number: 238923407
Start: 922325
End: 923743
Strand: Direct
Name: ppsA [H]
Synonym: EUBREC_1027
Alternate gene names: 238923407
Gene position: 922325-923743 (Clockwise)
Preceding gene: 238923406
Following gene: 238923408
Centisome position: 26.74
GC content: 44.89
Gene sequence:
>1419_bases ATGATGAAGACGAGAAAGGGACACAACGTATATCCGATTACGGTTGCACAAAAATTTCATTTGTACTATGCAAAGTACTG TCCGAATATGGCAGTACTCAATATAGGTACAAGCCTGACAATCGGCACGGAGCTTGACTGGAACGTGCTAAGGGATTCAA TCAACTACGCGTATGCCAGAAACGAGGCCATGCGTATCCGCTTTACAAGGGATAAGGATGGAGAGTGCTATCAGTATATT GCGGATGTGGATGAGGATTTTAAAGAGAGAACTGTCGATTTCAAGGATTTTACGGATGTAACCATGGAGGAGGCAGAGAA TGAGATGCAAGGCTGGACACAGGTGCCGTTTGAGTTTGAGGACTCTCCTATGACCAAAATCGTGATGATAAAGATGCCGG ATGGATTCAATGGAGTGTACTTCTTAGGTCATCACATGGTGGTTGATGCGCAGTCACTTATTGCATTTTTAAAGGATATT ATTGAGATATACTGTAATGCCATGTATGAGGGAGTACCTTTTCCAAAGGATATGTGCTCATATATCGAGCAGCTTAAAAA GGATCTGGCATATGAAGCCGGAAGTAAGGCACAGCTTAGGGACAGAGAGTTCTTTGAGAAGCTTATCAGACAGTCGGAGC CAATCTACAACGGAATCGACGGCACAGCAAAGCTTGATGCGGCAAGAGAACTGATGCATGATAACAAGCTAAGGAGTGCA TTCAATGCATCGGATGATGTCACCTCAGCGCTTGATATCTTTCATCTGGAGGCTGAGCCGACAAAGCGTCTTATGGATTT TTGCGAGAAATATCATATTTCGCTTGCTTGTCTGCTTCTCATGGGAATCAGGACGTTTTTCCAGAAGGAAAACGGCTTCG ATGATGTCTCCGTAAACAATGCCATCGCCAGACGTGCGACACTTAAGGAGAAGAAGTCAGGCGGCACACGTATTCATTCG TTTCCGTTTAGGACGTGCTTTTCAAAGGATGTACGCTTTATCGATGCTGTGTATACCATTAGGGATAAGCAAAACGAGCT GTTCCGCCATGCAAACTACAACCCGACAGAGTACTTTGCACTGCGCTCAAAGACCTATCCGCAGCCAAAGGCGGGGCTTA CATATGAGCCGATGTCGCTTACATATCAGCCTATGACCTTAAAGGAAAAGGGCTTAAACGACCTGGGAGATATAAAATAC AAGACTAAGTGGTACCCGAACGGCATGACTACACAGGCTATGTATCTAACGGTAATGCACCGCCCGGAGGACAACGGACT GGATTTCAGCTTCGAGCATCAGGTCAAGGCAGTCTCAAGAAAGCAGCTTGAGTATATGTACTATTACCTGTGCAAAATCA TGTTCAAGGGAGCAGAAAACCCTGAGCTTACAATAGGCGAAATCATTAAATTAGTGTAG
Upstream 100 bases:
>100_bases CAAAGCTGATAGTAAAGGGTGCAGGACACTGCGAGAGCTATTACAAGAATACGAAAGCTTTCGAGGACGCACTTGATAAA TTTTTGGAAGGAGTTATGAG
Downstream 100 bases:
>100_bases TGGATTAGGAAACGTATTAGGTAAAAGGAGATTATTATGTTTGATGAATTAGTGGAAATTATCTGTAATTATGTTGATGT TCAGCCGGCAGATGTGCACG
Product: non-ribosomal peptide synthetase, terminal component
Products: pyrophosphate; AMP; enterobactin; pyrophosphate; L-Seryl-AMP [C]
Alternate protein names: Peptide synthase 1; ATP-dependent glutamate adenylase 1; GluA 1; Glutamate activase 1; ATP-dependent ornithine adenylase; OrnA; Ornithine activase [H]
Number of amino acids: Translated: 472; Mature: 472
Protein sequence:
>472_residues MMKTRKGHNVYPITVAQKFHLYYAKYCPNMAVLNIGTSLTIGTELDWNVLRDSINYAYARNEAMRIRFTRDKDGECYQYI ADVDEDFKERTVDFKDFTDVTMEEAENEMQGWTQVPFEFEDSPMTKIVMIKMPDGFNGVYFLGHHMVVDAQSLIAFLKDI IEIYCNAMYEGVPFPKDMCSYIEQLKKDLAYEAGSKAQLRDREFFEKLIRQSEPIYNGIDGTAKLDAARELMHDNKLRSA FNASDDVTSALDIFHLEAEPTKRLMDFCEKYHISLACLLLMGIRTFFQKENGFDDVSVNNAIARRATLKEKKSGGTRIHS FPFRTCFSKDVRFIDAVYTIRDKQNELFRHANYNPTEYFALRSKTYPQPKAGLTYEPMSLTYQPMTLKEKGLNDLGDIKY KTKWYPNGMTTQAMYLTVMHRPEDNGLDFSFEHQVKAVSRKQLEYMYYYLCKIMFKGAENPELTIGEIIKLV
Sequences:
>Translated_472_residues MMKTRKGHNVYPITVAQKFHLYYAKYCPNMAVLNIGTSLTIGTELDWNVLRDSINYAYARNEAMRIRFTRDKDGECYQYI ADVDEDFKERTVDFKDFTDVTMEEAENEMQGWTQVPFEFEDSPMTKIVMIKMPDGFNGVYFLGHHMVVDAQSLIAFLKDI IEIYCNAMYEGVPFPKDMCSYIEQLKKDLAYEAGSKAQLRDREFFEKLIRQSEPIYNGIDGTAKLDAARELMHDNKLRSA FNASDDVTSALDIFHLEAEPTKRLMDFCEKYHISLACLLLMGIRTFFQKENGFDDVSVNNAIARRATLKEKKSGGTRIHS FPFRTCFSKDVRFIDAVYTIRDKQNELFRHANYNPTEYFALRSKTYPQPKAGLTYEPMSLTYQPMTLKEKGLNDLGDIKY KTKWYPNGMTTQAMYLTVMHRPEDNGLDFSFEHQVKAVSRKQLEYMYYYLCKIMFKGAENPELTIGEIIKLV >Mature_472_residues MMKTRKGHNVYPITVAQKFHLYYAKYCPNMAVLNIGTSLTIGTELDWNVLRDSINYAYARNEAMRIRFTRDKDGECYQYI ADVDEDFKERTVDFKDFTDVTMEEAENEMQGWTQVPFEFEDSPMTKIVMIKMPDGFNGVYFLGHHMVVDAQSLIAFLKDI IEIYCNAMYEGVPFPKDMCSYIEQLKKDLAYEAGSKAQLRDREFFEKLIRQSEPIYNGIDGTAKLDAARELMHDNKLRSA FNASDDVTSALDIFHLEAEPTKRLMDFCEKYHISLACLLLMGIRTFFQKENGFDDVSVNNAIARRATLKEKKSGGTRIHS FPFRTCFSKDVRFIDAVYTIRDKQNELFRHANYNPTEYFALRSKTYPQPKAGLTYEPMSLTYQPMTLKEKGLNDLGDIKY KTKWYPNGMTTQAMYLTVMHRPEDNGLDFSFEHQVKAVSRKQLEYMYYYLCKIMFKGAENPELTIGEIIKLV
Specific function: This protein is a multifunctional enzyme, able to activate and polymerize the amino acids Glu and Orn as part of the biosynthesis of the lipopeptide antibiotic lipastatin. The Orn residue is further epimerized to the D-isomer form. The activation sites fo
COG id: COG1020
COG function: function code Q; Non-ribosomal peptide synthetase modules and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 acyl carrier domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010071 - InterPro: IPR009081 - InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR001242 - InterPro: IPR010060 - InterPro: IPR006163 - InterPro: IPR006162 [H]
Pfam domain/function: PF00501 AMP-binding; PF00668 Condensation; PF00550 PP-binding [H]
EC number: 2.7.7.- [C]
Molecular weight: Translated: 54943; Mature: 54943
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKTRKGHNVYPITVAQKFHLYYAKYCPNMAVLNIGTSLTIGTELDWNVLRDSINYAYAR CCCCCCCCCEEEEEEHHHHHHHHHHHCCCEEEEECCCEEEECCCCCHHHHHHHHHHHEEC NEAMRIRFTRDKDGECYQYIADVDEDFKERTVDFKDFTDVTMEEAENEMQGWTQVPFEFE CCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEECCCEEC DSPMTKIVMIKMPDGFNGVYFLGHHMVVDAQSLIAFLKDIIEIYCNAMYEGVPFPKDMCS CCCCEEEEEEECCCCCCCEEEECCCCEECHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH YIEQLKKDLAYEAGSKAQLRDREFFEKLIRQSEPIYNGIDGTAKLDAARELMHDNKLRSA HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH FNASDDVTSALDIFHLEAEPTKRLMDFCEKYHISLACLLLMGIRTFFQKENGFDDVSVNN CCCCCHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH AIARRATLKEKKSGGTRIHSFPFRTCFSKDVRFIDAVYTIRDKQNELFRHANYNPTEYFA HHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHEEE LRSKTYPQPKAGLTYEPMSLTYQPMTLKEKGLNDLGDIKYKTKWYPNGMTTQAMYLTVMH ECCCCCCCCCCCCEECCCCEEECCCCHHHCCCCCHHCCCEEEEECCCCCCCCEEEEEEEE RPEDNGLDFSFEHQVKAVSRKQLEYMYYYLCKIMFKGAENPELTIGEIIKLV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHCC >Mature Secondary Structure MMKTRKGHNVYPITVAQKFHLYYAKYCPNMAVLNIGTSLTIGTELDWNVLRDSINYAYAR CCCCCCCCCEEEEEEHHHHHHHHHHHCCCEEEEECCCEEEECCCCCHHHHHHHHHHHEEC NEAMRIRFTRDKDGECYQYIADVDEDFKERTVDFKDFTDVTMEEAENEMQGWTQVPFEFE CCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEECCCEEC DSPMTKIVMIKMPDGFNGVYFLGHHMVVDAQSLIAFLKDIIEIYCNAMYEGVPFPKDMCS CCCCEEEEEEECCCCCCCEEEECCCCEECHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH YIEQLKKDLAYEAGSKAQLRDREFFEKLIRQSEPIYNGIDGTAKLDAARELMHDNKLRSA HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH FNASDDVTSALDIFHLEAEPTKRLMDFCEKYHISLACLLLMGIRTFFQKENGFDDVSVNN CCCCCHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH AIARRATLKEKKSGGTRIHSFPFRTCFSKDVRFIDAVYTIRDKQNELFRHANYNPTEYFA HHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHEEE LRSKTYPQPKAGLTYEPMSLTYQPMTLKEKGLNDLGDIKYKTKWYPNGMTTQAMYLTVMH ECCCCCCCCCCCCEECCCCEEECCCCHHHCCCCCHHCCCEEEEECCCCCCCCEEEEEEEE RPEDNGLDFSFEHQVKAVSRKQLEYMYYYLCKIMFKGAENPELTIGEIIKLV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: Phosphopantetheine. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 6 ATP; L-serine; 2,3-dihydroxybenzoate [C]
Specific reaction: 6 ATP + 3 L-serine + 3 2,3-dihydroxybenzoate = 6 pyrophosphate + 6 AMP + enterobactin ATP + L-serine = pyrophosphate + L-Seryl-AMP 6 ATP + 3 L-serine + 3 2,3-dihydroxybenzoate = 6 pyrophosphate + 6 AMP + enterobactin ATP + L-serine = pyrophosphate + L-Ser
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7711903; 9384377; 10471562 [H]