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The map label for this gene is yqkD [H]

Identifier: 238923406

GI number: 238923406

Start: 921372

End: 922328

Strand: Direct

Name: yqkD [H]

Synonym: EUBREC_1026

Alternate gene names: 238923406

Gene position: 921372-922328 (Clockwise)

Preceding gene: 238923405

Following gene: 238923407

Centisome position: 26.71

GC content: 46.29

Gene sequence:

>957_bases
GTGATGAAGATGAAGTGGGGAATAATTGCAGGTGTTTTAGGTGGTATTGCTGCAGCAGAGGCAGGCGGCAGTGCTTATTT
CTACAGGAGGACCATGATGCGCTACAATGCCAAGAAGGAGCGCACGATGAAGATGTCCGGGGTTGACTGGGAGAGCTATT
ACAGCTTTATGAAGCCACGCGGAGAGTGGATGAGAGCACAGGCTCATGAGGATGTGTGGATTAGGTCCGATGATGGATTA
AGACTGCATGCCACATATTTTCCTGGGATAGATGGAGGTAATCCGGATAAAGCCGTCATATGCTTTCACGGCTACACAAG
TGAAGCTATGTCTGATTACAGCAGCATATCCAATTACTATTTAAAGAAGGGCTATAGCATGCTGCTTGTAGATGCGAGGG
CACATGGACAAAGCGAGGGTAAATTCATAGGCTTCGGCTGCAAGGACCGCTATGATGCGCTTAAGTGGATTGACTGGATG
ATTAAGAAGGCAGGCAATGGCATAAGGATTGTTTTGATGGGAAATTCCATGGGAGGTGCCACTGTGCTTATGGCAAGTGG
ACTTAATCTGCCGGAGCAGGTGAAGGGAATTGTGTCAGACTGTGCATTTACCTCGCCTAAGGCGGTATTTACACATGTGC
TTCACAGCATGTACCATCTGCCGGCTTTTCCGATGATTCAGATTGCAGATTTTGTGAACAGAAAAATGGCAGGGTATGGG
CTTGATGAATGCAATGCTGCAAAAGAGGTGCAAAAGGCGAAGCTGCCTATTTTGTTTATCCATGGTGATAAGGATACATT
TGTGCCATGTAGCATGTGTGATGAGCTTTATGCAAGCTGCGCGTCACAAAAGACAAAGCTGATAGTAAAGGGTGCAGGAC
ACTGCGAGAGCTATTACAAGAATACGAAAGCTTTCGAGGACGCACTTGATAAATTTTTGGAAGGAGTTATGAGATGA

Upstream 100 bases:

>100_bases
TGATCCGAGTCTTGCATTTACAACAGGCAAGCTCAAGGTGGAGGGAAATATTGATAAGGCACTTCGCCTGAAGCAGATTA
TAGACAGTAAGAAGGCGTAG

Downstream 100 bases:

>100_bases
TGAAGACGAGAAAGGGACACAACGTATATCCGATTACGGTTGCACAAAAATTTCATTTGTACTATGCAAAGTACTGTCCG
AATATGGCAGTACTCAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MMKMKWGIIAGVLGGIAAAEAGGSAYFYRRTMMRYNAKKERTMKMSGVDWESYYSFMKPRGEWMRAQAHEDVWIRSDDGL
RLHATYFPGIDGGNPDKAVICFHGYTSEAMSDYSSISNYYLKKGYSMLLVDARAHGQSEGKFIGFGCKDRYDALKWIDWM
IKKAGNGIRIVLMGNSMGGATVLMASGLNLPEQVKGIVSDCAFTSPKAVFTHVLHSMYHLPAFPMIQIADFVNRKMAGYG
LDECNAAKEVQKAKLPILFIHGDKDTFVPCSMCDELYASCASQKTKLIVKGAGHCESYYKNTKAFEDALDKFLEGVMR

Sequences:

>Translated_318_residues
MMKMKWGIIAGVLGGIAAAEAGGSAYFYRRTMMRYNAKKERTMKMSGVDWESYYSFMKPRGEWMRAQAHEDVWIRSDDGL
RLHATYFPGIDGGNPDKAVICFHGYTSEAMSDYSSISNYYLKKGYSMLLVDARAHGQSEGKFIGFGCKDRYDALKWIDWM
IKKAGNGIRIVLMGNSMGGATVLMASGLNLPEQVKGIVSDCAFTSPKAVFTHVLHSMYHLPAFPMIQIADFVNRKMAGYG
LDECNAAKEVQKAKLPILFIHGDKDTFVPCSMCDELYASCASQKTKLIVKGAGHCESYYKNTKAFEDALDKFLEGVMR
>Mature_318_residues
MMKMKWGIIAGVLGGIAAAEAGGSAYFYRRTMMRYNAKKERTMKMSGVDWESYYSFMKPRGEWMRAQAHEDVWIRSDDGL
RLHATYFPGIDGGNPDKAVICFHGYTSEAMSDYSSISNYYLKKGYSMLLVDARAHGQSEGKFIGFGCKDRYDALKWIDWM
IKKAGNGIRIVLMGNSMGGATVLMASGLNLPEQVKGIVSDCAFTSPKAVFTHVLHSMYHLPAFPMIQIADFVNRKMAGYG
LDECNAAKEVQKAKLPILFIHGDKDTFVPCSMCDELYASCASQKTKLIVKGAGHCESYYKNTKAFEDALDKFLEGVMR

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI226510965, Length=233, Percent_Identity=21.8884120171674, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001375 [H]

Pfam domain/function: PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 35507; Mature: 35507

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKMKWGIIAGVLGGIAAAEAGGSAYFYRRTMMRYNAKKERTMKMSGVDWESYYSFMKPR
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHEEEECCCCHHHHHHHHCCC
GEWMRAQAHEDVWIRSDDGLRLHATYFPGIDGGNPDKAVICFHGYTSEAMSDYSSISNYY
HHHHHHCCCCCEEEECCCCCEEEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHH
LKKGYSMLLVDARAHGQSEGKFIGFGCKDRYDALKWIDWMIKKAGNGIRIVLMGNSMGGA
HHCCCEEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCE
TVLMASGLNLPEQVKGIVSDCAFTSPKAVFTHVLHSMYHLPAFPMIQIADFVNRKMAGYG
EEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
LDECNAAKEVQKAKLPILFIHGDKDTFVPCSMCDELYASCASQKTKLIVKGAGHCESYYK
CCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHH
NTKAFEDALDKFLEGVMR
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMKMKWGIIAGVLGGIAAAEAGGSAYFYRRTMMRYNAKKERTMKMSGVDWESYYSFMKPR
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHEEEECCCCHHHHHHHHCCC
GEWMRAQAHEDVWIRSDDGLRLHATYFPGIDGGNPDKAVICFHGYTSEAMSDYSSISNYY
HHHHHHCCCCCEEEECCCCCEEEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHH
LKKGYSMLLVDARAHGQSEGKFIGFGCKDRYDALKWIDWMIKKAGNGIRIVLMGNSMGGA
HHCCCEEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCE
TVLMASGLNLPEQVKGIVSDCAFTSPKAVFTHVLHSMYHLPAFPMIQIADFVNRKMAGYG
EEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
LDECNAAKEVQKAKLPILFIHGDKDTFVPCSMCDELYASCASQKTKLIVKGAGHCESYYK
CCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHH
NTKAFEDALDKFLEGVMR
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]