| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is yhbJ [C]
Identifier: 238923105
GI number: 238923105
Start: 640436
End: 641311
Strand: Direct
Name: yhbJ [C]
Synonym: EUBREC_0697
Alternate gene names: 238923105
Gene position: 640436-641311 (Clockwise)
Preceding gene: 238923104
Following gene: 238923106
Centisome position: 18.57
GC content: 44.29
Gene sequence:
>876_bases GTGAAATTTGTAATAGTGACGGGCATGTCAGGTGCCGGAAAAAGCACAGCAATGAAAATGATGGAGGATATGGGATATTT CTGTATAGACAATCTGCCTATACAGCTATTAGATAAGCTCATAGACCTTTCAAACACCTTCCACAGTGATGTGTCCAAGG TGGCAGTCGGCATAGATGTGCGAAACGGCTCAGGAATTGATGCGATTCCACAGACACTCGAGCAGCTAAGGCAGAAAAAT TTTCCGTATGAGATACTTTTCCTCGATGCTGAGGATGAGGTGCTTGTAAAGCGATACAAGGAGACGAGGCGAAACCATCC TCTCGCAGGCAGTGAGCGCATCAATAAGGGAATCGTGCTTGAGAGGGAAAAGCTGCAGTATTTAAAGGACAATGCTGACT ATATCATAGACACAAGCCAGCTTCTCACAAGGGAGCTTAAAATTGAGCTGGAAAAGATATTTGTGCAGAATGAGGATTAC AAAAATCTGTTTATCACGATACTGTCCTTCGGCTTCAAGTATGGTATACCGTCAGACTCTGATATAGTCATGGATGTGAG GTTTCTGCCAAATCCCTACTATGTGGACGGACTACGCGCGAAAACCGGCAATGATAAGGAGATACAGGACTATGTCATGC AGTTTCCGGAGGCAAATGAGTTTATCGACAAGCTTGATGATATGATAAAGTTTCTCATTCCAAACTATATCTCTGAGGGC AAGAACCAGCTTGTTATATCTATAGGCTGCACCGGAGGCAAGCACCGCTCGGTAACGCTTGCAAACGAGCTGTACAAGAG GCTTAGCGGCTGTAATGACTATGGACTTAAGATAGAGCATCGCGACATAGGAAAGGATGCATTGAGAGGTAAATAA
Upstream 100 bases:
>100_bases CAGCGGATGTCCTGACACTCATAAAAGACGTGCAGGAAACAGTTTTAAAGCAGTTTGGAGTAAAGCTCGAACCGGAAGTT AAGATGATTGGAGAATTCTA
Downstream 100 bases:
>100_bases CATGTCGTTTTCCAGTGATGTAAAGGAAGAGCTGGCAAAGCAGGTATCAAAGAGCAGGCACTGTCAGCTTGCTGAGCTTG CAGGCATCATAGAGCTTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MKFVIVTGMSGAGKSTAMKMMEDMGYFCIDNLPIQLLDKLIDLSNTFHSDVSKVAVGIDVRNGSGIDAIPQTLEQLRQKN FPYEILFLDAEDEVLVKRYKETRRNHPLAGSERINKGIVLEREKLQYLKDNADYIIDTSQLLTRELKIELEKIFVQNEDY KNLFITILSFGFKYGIPSDSDIVMDVRFLPNPYYVDGLRAKTGNDKEIQDYVMQFPEANEFIDKLDDMIKFLIPNYISEG KNQLVISIGCTGGKHRSVTLANELYKRLSGCNDYGLKIEHRDIGKDALRGK
Sequences:
>Translated_291_residues MKFVIVTGMSGAGKSTAMKMMEDMGYFCIDNLPIQLLDKLIDLSNTFHSDVSKVAVGIDVRNGSGIDAIPQTLEQLRQKN FPYEILFLDAEDEVLVKRYKETRRNHPLAGSERINKGIVLEREKLQYLKDNADYIIDTSQLLTRELKIELEKIFVQNEDY KNLFITILSFGFKYGIPSDSDIVMDVRFLPNPYYVDGLRAKTGNDKEIQDYVMQFPEANEFIDKLDDMIKFLIPNYISEG KNQLVISIGCTGGKHRSVTLANELYKRLSGCNDYGLKIEHRDIGKDALRGK >Mature_291_residues MKFVIVTGMSGAGKSTAMKMMEDMGYFCIDNLPIQLLDKLIDLSNTFHSDVSKVAVGIDVRNGSGIDAIPQTLEQLRQKN FPYEILFLDAEDEVLVKRYKETRRNHPLAGSERINKGIVLEREKLQYLKDNADYIIDTSQLLTRELKIELEKIFVQNEDY KNLFITILSFGFKYGIPSDSDIVMDVRFLPNPYYVDGLRAKTGNDKEIQDYVMQFPEANEFIDKLDDMIKFLIPNYISEG KNQLVISIGCTGGKHRSVTLANELYKRLSGCNDYGLKIEHRDIGKDALRGK
Specific function: Displays ATPase and GTPase activities
COG id: COG1660
COG function: function code R; Predicted P-loop-containing kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0042 family
Homologues:
Organism=Escherichia coli, GI1789598, Length=291, Percent_Identity=38.8316151202749, Blast_Score=196, Evalue=2e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y697_EUBR3 (C4ZEG8)
Other databases:
- EMBL: CP001107 - RefSeq: YP_002936618.1 - ProteinModelPortal: C4ZEG8 - GeneID: 7965980 - GenomeReviews: CP001107_GR - KEGG: ere:EUBREC_0697 - ProtClustDB: PRK05416 - HAMAP: MF_00636 - InterPro: IPR005337 - PIRSF: PIRSF005052
Pfam domain/function: PF03668 ATP_bind_2
EC number: NA
Molecular weight: Translated: 33229; Mature: 33229
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFVIVTGMSGAGKSTAMKMMEDMGYFCIDNLPIQLLDKLIDLSNTFHSDVSKVAVGIDV CEEEEEECCCCCCHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHEEEEEEE RNGSGIDAIPQTLEQLRQKNFPYEILFLDAEDEVLVKRYKETRRNHPLAGSERINKGIVL CCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCHHHCCCCEEE EREKLQYLKDNADYIIDTSQLLTRELKIELEKIFVQNEDYKNLFITILSFGFKYGIPSDS EHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCCCCC DIVMDVRFLPNPYYVDGLRAKTGNDKEIQDYVMQFPEANEFIDKLDDMIKFLIPNYISEG CEEEEEEECCCCEEECCEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC KNQLVISIGCTGGKHRSVTLANELYKRLSGCNDYGLKIEHRDIGKDALRGK CCEEEEEEECCCCCCCEEEHHHHHHHHHCCCCCCCCEEEECCCCCHHHCCC >Mature Secondary Structure MKFVIVTGMSGAGKSTAMKMMEDMGYFCIDNLPIQLLDKLIDLSNTFHSDVSKVAVGIDV CEEEEEECCCCCCHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHEEEEEEE RNGSGIDAIPQTLEQLRQKNFPYEILFLDAEDEVLVKRYKETRRNHPLAGSERINKGIVL CCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCHHHCCCCEEE EREKLQYLKDNADYIIDTSQLLTRELKIELEKIFVQNEDYKNLFITILSFGFKYGIPSDS EHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCCCCC DIVMDVRFLPNPYYVDGLRAKTGNDKEIQDYVMQFPEANEFIDKLDDMIKFLIPNYISEG CEEEEEEECCCCEEECCEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC KNQLVISIGCTGGKHRSVTLANELYKRLSGCNDYGLKIEHRDIGKDALRGK CCEEEEEEECCCCCCCEEEHHHHHHHHHCCCCCCCCEEEECCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA