Click here to switch to the map view.

The map label for this gene is whiA [H]

Identifier: 238923106

GI number: 238923106

Start: 641313

End: 642182

Strand: Direct

Name: whiA [H]

Synonym: EUBREC_0698

Alternate gene names: 238923106

Gene position: 641313-642182 (Clockwise)

Preceding gene: 238923105

Following gene: 238923107

Centisome position: 18.59

GC content: 48.51

Gene sequence:

>870_bases
ATGTCGTTTTCCAGTGATGTAAAGGAAGAGCTGGCAAAGCAGGTATCAAAGAGCAGGCACTGTCAGCTTGCTGAGCTTGC
AGGCATCATAGAGCTTTCGGGCCGTATCAATGAAAAAACAAAGGGACTTGAGCTCGACACCGAAAACCTGCTGCTTTTAA
ATAAATATGCCACACTTATGAAGCGTGCCTTTGGCACAGATACCACAAAGGCGCTGGATGAGCAGGATACCGGAAAAATA
CTTGCAGCGCTTAAAATCACGGCACAGCCTGTCAACAGACAGACCGCAGACGGACTGCTTCTTATGCAGACATGCTGCAA
GAGAGCCTTTATCAGGGGAGCTTTCATGGCAGCAGGCTCGATAAGCGACCCCAACAAAGCGTACCATTTTGAGATAGTGT
GTCATACGAAAGAGCAGGCAAAGCAGCTTCAGGAGCTCTTGTGCGGCTTTGATACGGATGCCAAGATAGTAGAGCGCAAG
GGGCACTATGTAGTGTACATAAAGGAGGGCGCCCACATCGTGGACAGTCTCAACATCATGGAGGCATATGTGTCACTTAT
GAAGCTGGAAAATGTGCGCATATTAAAGGAAATGCGCAACAGTGTAAACCGTAAAGTAAACTGCGAAACCGCAAACATCA
GCAAGACTGTGAATGCGGCAGTAAAGCAGATAGAGGATATCAGACTGATACAGAAAATGAGAGGACTCGATGATTTACCG
GCGCAGCTTCGGGAGATGGCGCTGCTTCGGCTTGAATATCCGGATGCACCGCTAAAGGAGCTCGGAGGATATCTGGATCC
GCCAATGGGTAAATCGGGAGTCAACCACAGGCTTAGAAAATTATCGGCGATTGCGGAGGAACTGAGATAG

Upstream 100 bases:

>100_bases
CTTGCAAACGAGCTGTACAAGAGGCTTAGCGGCTGTAATGACTATGGACTTAAGATAGAGCATCGCGACATAGGAAAGGA
TGCATTGAGAGGTAAATAAC

Downstream 100 bases:

>100_bases
ATGAAGAAAAAGCTTTTATTTGTATTTAATCCCAAATCAGGCAAGGGACTCATAAAGGAGCACCTGGTAAATATCGTGGA
CATCATGACAAAGGCCGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MSFSSDVKEELAKQVSKSRHCQLAELAGIIELSGRINEKTKGLELDTENLLLLNKYATLMKRAFGTDTTKALDEQDTGKI
LAALKITAQPVNRQTADGLLLMQTCCKRAFIRGAFMAAGSISDPNKAYHFEIVCHTKEQAKQLQELLCGFDTDAKIVERK
GHYVVYIKEGAHIVDSLNIMEAYVSLMKLENVRILKEMRNSVNRKVNCETANISKTVNAAVKQIEDIRLIQKMRGLDDLP
AQLREMALLRLEYPDAPLKELGGYLDPPMGKSGVNHRLRKLSAIAEELR

Sequences:

>Translated_289_residues
MSFSSDVKEELAKQVSKSRHCQLAELAGIIELSGRINEKTKGLELDTENLLLLNKYATLMKRAFGTDTTKALDEQDTGKI
LAALKITAQPVNRQTADGLLLMQTCCKRAFIRGAFMAAGSISDPNKAYHFEIVCHTKEQAKQLQELLCGFDTDAKIVERK
GHYVVYIKEGAHIVDSLNIMEAYVSLMKLENVRILKEMRNSVNRKVNCETANISKTVNAAVKQIEDIRLIQKMRGLDDLP
AQLREMALLRLEYPDAPLKELGGYLDPPMGKSGVNHRLRKLSAIAEELR
>Mature_288_residues
SFSSDVKEELAKQVSKSRHCQLAELAGIIELSGRINEKTKGLELDTENLLLLNKYATLMKRAFGTDTTKALDEQDTGKIL
AALKITAQPVNRQTADGLLLMQTCCKRAFIRGAFMAAGSISDPNKAYHFEIVCHTKEQAKQLQELLCGFDTDAKIVERKG
HYVVYIKEGAHIVDSLNIMEAYVSLMKLENVRILKEMRNSVNRKVNCETANISKTVNAAVKQIEDIRLIQKMRGLDDLPA
QLREMALLRLEYPDAPLKELGGYLDPPMGKSGVNHRLRKLSAIAEELR

Specific function: May be required for sporulation [H]

COG id: COG1481

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the whiA transcriptional regulatory family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003802
- InterPro:   IPR023054
- InterPro:   IPR018478 [H]

Pfam domain/function: PF02650 HTH_WhiA; PF10298 WhiA_N [H]

EC number: NA

Molecular weight: Translated: 32359; Mature: 32228

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFSSDVKEELAKQVSKSRHCQLAELAGIIELSGRINEKTKGLELDTENLLLLNKYATLM
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCHHHHHHHHHH
KRAFGTDTTKALDEQDTGKILAALKITAQPVNRQTADGLLLMQTCCKRAFIRGAFMAAGS
HHHHCCCHHHHHCCCCCCCEEHHHEECCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHCCC
ISDPNKAYHFEIVCHTKEQAKQLQELLCGFDTDAKIVERKGHYVVYIKEGAHIVDSLNIM
CCCCCCEEEEEEEECCHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEECCCCHHHHHHHHH
EAYVSLMKLENVRILKEMRNSVNRKVNCETANISKTVNAAVKQIEDIRLIQKMRGLDDLP
HHHHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
AQLREMALLRLEYPDAPLKELGGYLDPPMGKSGVNHRLRKLSAIAEELR
HHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SFSSDVKEELAKQVSKSRHCQLAELAGIIELSGRINEKTKGLELDTENLLLLNKYATLM
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCHHHHHHHHHH
KRAFGTDTTKALDEQDTGKILAALKITAQPVNRQTADGLLLMQTCCKRAFIRGAFMAAGS
HHHHCCCHHHHHCCCCCCCEEHHHEECCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHCCC
ISDPNKAYHFEIVCHTKEQAKQLQELLCGFDTDAKIVERKGHYVVYIKEGAHIVDSLNIM
CCCCCCEEEEEEEECCHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEECCCCHHHHHHHHH
EAYVSLMKLENVRILKEMRNSVNRKVNCETANISKTVNAAVKQIEDIRLIQKMRGLDDLP
HHHHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
AQLREMALLRLEYPDAPLKELGGYLDPPMGKSGVNHRLRKLSAIAEELR
HHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA