| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238922585
Identifier: 238922585
GI number: 238922585
Start: 154985
End: 155740
Strand: Direct
Name: 238922585
Synonym: EUBREC_0159
Alternate gene names: NA
Gene position: 154985-155740 (Clockwise)
Preceding gene: 238922584
Following gene: 238922586
Centisome position: 4.49
GC content: 33.99
Gene sequence:
>756_bases ATGACAATAAATCAGAAAAAGTCTTTAGTGGCATTTTACATTTCAAAGTTTAATGATGACGCATTTCGTGAATTGGGATA TGGTGGACCGGTGTCAAAAGCGATGGATGACTTATCAGTACGAATTACCGGTCCGGGTGTTGAACCTAATGCTTATTTAA GGCGAAGGCGGGATGAATTTGATGTGTTTTTTGATAACGGAAGAGTTGGACAACGCAACAGAAAACCAACAGAGACGGTA AAAGAACTGTATGGGCAATGGAATGTAATGGAGTTTGAAGAAATAACAGAAATTGTAAAATCAGTTTTGGATGGAACAAT GGAAGAATCTCAGGTGATTAATTTGGAAGTAGATGAAGAAACTGTTTCAGAATATGATGTTGAAACGTATCTAAATTTTG ATGACAATACGGCAGCATTAAATAAAACGGTAAAATCTGTGATGGAACGTACTTATTCCAAAAAGAAGGTAGAAATGTTA AAGCGTTTATATGCGTATAGATGTCAGATATGTGGTCAAAATGTCGGTGAAGAACATGGCGTTAATATTGCAGAAGCTCA TCATATTAAGTATTTTTCAAAGAGTGTTGATAATTCATCAGATAATCTTCTTATATTGTGTCCAAATCATCATAGTCTGA TTCATGTATTAAATCCAAAATTTGATTATGATGAATTACAGTATATTTATCCAGACGGAAAGACTGATAAAATTATATTG GATTTGCATCTGACTCATGGTAAGGAGGAAGAATAA
Upstream 100 bases:
>100_bases AGCTTATTAAACTAGCAGGTAATAGTATCGTGGTTGATGTTTTGGAAGCTATTTTCAGACAGATAATGGATATTAATGAG AAGATTTTAGGTGAAAGAAA
Downstream 100 bases:
>100_bases AAATGACAATATCTGAGCAAATAAAAGTATTGTGTGTCAGACAGAAAATAAGTCTGGCAGAGTTGGCAAGGAGATTGGGA ACAACACCTCAAAATTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MTINQKKSLVAFYISKFNDDAFRELGYGGPVSKAMDDLSVRITGPGVEPNAYLRRRRDEFDVFFDNGRVGQRNRKPTETV KELYGQWNVMEFEEITEIVKSVLDGTMEESQVINLEVDEETVSEYDVETYLNFDDNTAALNKTVKSVMERTYSKKKVEML KRLYAYRCQICGQNVGEEHGVNIAEAHHIKYFSKSVDNSSDNLLILCPNHHSLIHVLNPKFDYDELQYIYPDGKTDKIIL DLHLTHGKEEE
Sequences:
>Translated_251_residues MTINQKKSLVAFYISKFNDDAFRELGYGGPVSKAMDDLSVRITGPGVEPNAYLRRRRDEFDVFFDNGRVGQRNRKPTETV KELYGQWNVMEFEEITEIVKSVLDGTMEESQVINLEVDEETVSEYDVETYLNFDDNTAALNKTVKSVMERTYSKKKVEML KRLYAYRCQICGQNVGEEHGVNIAEAHHIKYFSKSVDNSSDNLLILCPNHHSLIHVLNPKFDYDELQYIYPDGKTDKIIL DLHLTHGKEEE >Mature_250_residues TINQKKSLVAFYISKFNDDAFRELGYGGPVSKAMDDLSVRITGPGVEPNAYLRRRRDEFDVFFDNGRVGQRNRKPTETVK ELYGQWNVMEFEEITEIVKSVLDGTMEESQVINLEVDEETVSEYDVETYLNFDDNTAALNKTVKSVMERTYSKKKVEMLK RLYAYRCQICGQNVGEEHGVNIAEAHHIKYFSKSVDNSSDNLLILCPNHHSLIHVLNPKFDYDELQYIYPDGKTDKIILD LHLTHGKEEE
Specific function: Unknown
COG id: COG3440
COG function: function code V; Predicted restriction endonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29019; Mature: 28888
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTINQKKSLVAFYISKFNDDAFRELGYGGPVSKAMDDLSVRITGPGVEPNAYLRRRRDEF CCCCCHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHCCCEEEEECCCCCCHHHHHHCCCCC DVFFDNGRVGQRNRKPTETVKELYGQWNVMEFEEITEIVKSVLDGTMEESQVINLEVDEE EEEECCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECHH TVSEYDVETYLNFDDNTAALNKTVKSVMERTYSKKKVEMLKRLYAYRCQICGQNVGEEHG HHHHHCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHC VNIAEAHHIKYFSKSVDNSSDNLLILCPNHHSLIHVLNPKFDYDELQYIYPDGKTDKIIL CCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEECCCCCCCCEEEECCCCCCCEEEE DLHLTHGKEEE EEEECCCCCCC >Mature Secondary Structure TINQKKSLVAFYISKFNDDAFRELGYGGPVSKAMDDLSVRITGPGVEPNAYLRRRRDEF CCCCHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHCCCEEEEECCCCCCHHHHHHCCCCC DVFFDNGRVGQRNRKPTETVKELYGQWNVMEFEEITEIVKSVLDGTMEESQVINLEVDEE EEEECCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECHH TVSEYDVETYLNFDDNTAALNKTVKSVMERTYSKKKVEMLKRLYAYRCQICGQNVGEEHG HHHHHCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHC VNIAEAHHIKYFSKSVDNSSDNLLILCPNHHSLIHVLNPKFDYDELQYIYPDGKTDKIIL CCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEECCCCCCCCEEEECCCCCCCEEEE DLHLTHGKEEE EEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA