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The map label for this gene is rpfG [H]

Identifier: 238922194

GI number: 238922194

Start: 391928

End: 392566

Strand: Reverse

Name: rpfG [H]

Synonym: EUBELI_20429

Alternate gene names: 238922194

Gene position: 392566-391928 (Counterclockwise)

Preceding gene: 238922195

Following gene: 238922193

Centisome position: 62.64

GC content: 33.18

Gene sequence:

>639_bases
ATGGGACATAATAATATTAACAATGAAGAACTGCTTGAATATATTTTAAAAGATTTTAAAAGCGGCGTTCAGCATGGGAT
TCTTGTGGCAAATCTTACATATATGCTTGCTAAGAGAATGGGACTTACGGATAGTGAGTGCCATGAATTAAAAATAGCTG
GAATGTTGCATGATATTGGAAAACTTAAATTATCAGAATACTTATATGGCAGAAATTCTGGCGAATTATCAGTCGAAGAG
ATGAAATATATGAGAATGCACTCTAAAATCAGCTTTGATGTATTGAAAAATTATGATTATTCAGATAATATAATGAAAGT
TGTTCTCTATCACCATGAGTGCTATGATGGAAGTGGCTATCCTGATAATCTTAAAGGAACAGATATTCCACTGGGTGCAA
GAATTCTTAAGGTGACAGATGAATTTGCTGCGCTGATTTCAGAAAGACCGTATAGGAAAGCATTTGACATTGATACGGCT
GTGAATATTCTTATTGAAGAGATTAAGAATCTTGATATGAGGGTGTTTATTGAGTTTCAGCGAATGATTCACGAGGAAGA
AACATTTGAGATAATAAGAAATAGTAAGATAGATTTAGATAGTCTTAGTCTTGAAGATATTCTATCCTTCGCAGATTAG

Upstream 100 bases:

>100_bases
TCTTATGGCTGCGATGTTATTCAGGGCTTTTATTTTGACAAGCCGCTTCCGGCAAAGGAATTTATACAGAAATACTATAA
GGGCAGCAGGGAGTCTACCT

Downstream 100 bases:

>100_bases
TATTTAATTACAGGAAAGAGGTAAAGTAAGATGGCAGAGTCAATGGTTGGCTTAAAGAGATCGCACAGATGTACAGAGGT
TTCATCGGCTGATATTGGTA

Product: putative two-component system response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MGHNNINNEELLEYILKDFKSGVQHGILVANLTYMLAKRMGLTDSECHELKIAGMLHDIGKLKLSEYLYGRNSGELSVEE
MKYMRMHSKISFDVLKNYDYSDNIMKVVLYHHECYDGSGYPDNLKGTDIPLGARILKVTDEFAALISERPYRKAFDIDTA
VNILIEEIKNLDMRVFIEFQRMIHEEETFEIIRNSKIDLDSLSLEDILSFAD

Sequences:

>Translated_212_residues
MGHNNINNEELLEYILKDFKSGVQHGILVANLTYMLAKRMGLTDSECHELKIAGMLHDIGKLKLSEYLYGRNSGELSVEE
MKYMRMHSKISFDVLKNYDYSDNIMKVVLYHHECYDGSGYPDNLKGTDIPLGARILKVTDEFAALISERPYRKAFDIDTA
VNILIEEIKNLDMRVFIEFQRMIHEEETFEIIRNSKIDLDSLSLEDILSFAD
>Mature_211_residues
GHNNINNEELLEYILKDFKSGVQHGILVANLTYMLAKRMGLTDSECHELKIAGMLHDIGKLKLSEYLYGRNSGELSVEEM
KYMRMHSKISFDVLKNYDYSDNIMKVVLYHHECYDGSGYPDNLKGTDIPLGARILKVTDEFAALISERPYRKAFDIDTAV
NILIEEIKNLDMRVFIEFQRMIHEEETFEIIRNSKIDLDSLSLEDILSFAD

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 24524; Mature: 24393

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGHNNINNEELLEYILKDFKSGVQHGILVANLTYMLAKRMGLTDSECHELKIAGMLHDIG
CCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
KLKLSEYLYGRNSGELSVEEMKYMRMHSKISFDVLKNYDYSDNIMKVVLYHHECYDGSGY
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC
PDNLKGTDIPLGARILKVTDEFAALISERPYRKAFDIDTAVNILIEEIKNLDMRVFIEFQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
RMIHEEETFEIIRNSKIDLDSLSLEDILSFAD
HHHHHHHHHHHHHCCCCCCHHCCHHHHHHHCC
>Mature Secondary Structure 
GHNNINNEELLEYILKDFKSGVQHGILVANLTYMLAKRMGLTDSECHELKIAGMLHDIG
CCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
KLKLSEYLYGRNSGELSVEEMKYMRMHSKISFDVLKNYDYSDNIMKVVLYHHECYDGSGY
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC
PDNLKGTDIPLGARILKVTDEFAALISERPYRKAFDIDTAVNILIEEIKNLDMRVFIEFQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
RMIHEEETFEIIRNSKIDLDSLSLEDILSFAD
HHHHHHHHHHHHHCCCCCCHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]