Click here to switch to the map view.

The map label for this gene is kdpE [H]

Identifier: 238921931

GI number: 238921931

Start: 130199

End: 130897

Strand: Reverse

Name: kdpE [H]

Synonym: EUBELI_20165

Alternate gene names: 238921931

Gene position: 130897-130199 (Counterclockwise)

Preceding gene: 238921932

Following gene: 238921930

Centisome position: 20.89

GC content: 36.19

Gene sequence:

>699_bases
ATGAATAAAACACAGATTCTTGTAGTTGAGGATGATTCACCAATAAGAAATCTCATAACAACAACATTAAAAACTAATAA
TTACAGGTATTTAACTGCTGTGAATGGAGAGAGTGCTATTTCACAGACTGCATCACATAATCCTGATATAATTCTGCTAG
ACTTAGGACTTCCTGATATAGATGGGGTGGAAGTTATAAAAAAGATAAGAACATGGACTAATACACCAATAATTGTTATA
AGCGCAAGAACTGAAGATGCGGATAAGATAGAAGCACTTGATGCAGGGGCAGACGATTATCTTACAAAGCCGTTTTCAGT
AGATGAGCTTCTTGCAAGGCTGCGTGTAACAGTAAGAAGACTGTCACTTATGCAGACGGATATGACTCAGAATACAAGTG
TATTCGAGAATGGAGATTTAAAAATTGACTATGCAGCTGGCTGTGCATATCTGAATGGAGAGGAGCTGCATCTTACACCT
ATTGAATATAAGCTTCTCATATTATTATCAAGAAATGTCGGAAGAGTGCTGACATACACTTATATTACTAAGAATATATG
GGGCAGTTCATGGGAAAATGATCTGGCATCACTTAGAGTATTTATGGCAACATTAAGAAAGAAAATTGAAAAAGATGTCA
ATTCCCCGCAGTATATACAGACGCATATTGGTATAGGATACAGAATGCTGAGAGTATAA

Upstream 100 bases:

>100_bases
ACTATTATAAATGCACATGGAAGTGAACTGGAATTAAGGGATAATACACCACATGGATGCATTTTCGAATTCAAACTGCA
GTTAAGTGAGGTACATTTAA

Downstream 100 bases:

>100_bases
TTATGGATTTCCTCATAAAAGTGTAAAACGGTGTATAATATAACCATAAAATATATGGAGGTTAATTATAAAAGGGGCAT
ACGTTAAAATAGGACTAAAT

Product: two-component system, OmpR family, KDP operon response regulator KdpE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MNKTQILVVEDDSPIRNLITTTLKTNNYRYLTAVNGESAISQTASHNPDIILLDLGLPDIDGVEVIKKIRTWTNTPIIVI
SARTEDADKIEALDAGADDYLTKPFSVDELLARLRVTVRRLSLMQTDMTQNTSVFENGDLKIDYAAGCAYLNGEELHLTP
IEYKLLILLSRNVGRVLTYTYITKNIWGSSWENDLASLRVFMATLRKKIEKDVNSPQYIQTHIGIGYRMLRV

Sequences:

>Translated_232_residues
MNKTQILVVEDDSPIRNLITTTLKTNNYRYLTAVNGESAISQTASHNPDIILLDLGLPDIDGVEVIKKIRTWTNTPIIVI
SARTEDADKIEALDAGADDYLTKPFSVDELLARLRVTVRRLSLMQTDMTQNTSVFENGDLKIDYAAGCAYLNGEELHLTP
IEYKLLILLSRNVGRVLTYTYITKNIWGSSWENDLASLRVFMATLRKKIEKDVNSPQYIQTHIGIGYRMLRV
>Mature_232_residues
MNKTQILVVEDDSPIRNLITTTLKTNNYRYLTAVNGESAISQTASHNPDIILLDLGLPDIDGVEVIKKIRTWTNTPIIVI
SARTEDADKIEALDAGADDYLTKPFSVDELLARLRVTVRRLSLMQTDMTQNTSVFENGDLKIDYAAGCAYLNGEELHLTP
IEYKLLILLSRNVGRVLTYTYITKNIWGSSWENDLASLRVFMATLRKKIEKDVNSPQYIQTHIGIGYRMLRV

Specific function: Member of the two-component regulatory system kdpD/kdpE involved in the regulation of the kdp operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786911, Length=227, Percent_Identity=43.1718061674009, Blast_Score=203, Evalue=7e-54,
Organism=Escherichia coli, GI1786599, Length=228, Percent_Identity=33.7719298245614, Blast_Score=137, Evalue=8e-34,
Organism=Escherichia coli, GI1788394, Length=227, Percent_Identity=30.3964757709251, Blast_Score=118, Evalue=3e-28,
Organism=Escherichia coli, GI1787375, Length=225, Percent_Identity=32.4444444444444, Blast_Score=117, Evalue=9e-28,
Organism=Escherichia coli, GI1789402, Length=226, Percent_Identity=33.6283185840708, Blast_Score=116, Evalue=1e-27,
Organism=Escherichia coli, GI1789809, Length=225, Percent_Identity=31.1111111111111, Blast_Score=116, Evalue=1e-27,
Organism=Escherichia coli, GI87082012, Length=228, Percent_Identity=30.7017543859649, Blast_Score=116, Evalue=1e-27,
Organism=Escherichia coli, GI1786784, Length=229, Percent_Identity=31.8777292576419, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1790552, Length=229, Percent_Identity=33.1877729257642, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1790860, Length=230, Percent_Identity=27.8260869565217, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI2367329, Length=232, Percent_Identity=28.8793103448276, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1790863, Length=233, Percent_Identity=26.1802575107296, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1787229, Length=225, Percent_Identity=26.2222222222222, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1788550, Length=107, Percent_Identity=36.4485981308411, Blast_Score=87, Evalue=7e-19,
Organism=Escherichia coli, GI145693140, Length=229, Percent_Identity=28.82096069869, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1790299, Length=113, Percent_Identity=33.6283185840708, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1787487, Length=148, Percent_Identity=27.7027027027027, Blast_Score=68, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26221; Mature: 26221

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKTQILVVEDDSPIRNLITTTLKTNNYRYLTAVNGESAISQTASHNPDIILLDLGLPDI
CCCEEEEEEECCCHHHHHHHHEEECCCEEEEEEECCCHHHHHHCCCCCCEEEEECCCCCC
DGVEVIKKIRTWTNTPIIVISARTEDADKIEALDAGADDYLTKPFSVDELLARLRVTVRR
CHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHH
LSLMQTDMTQNTSVFENGDLKIDYAAGCAYLNGEELHLTPIEYKLLILLSRNVGRVLTYT
HHHHHHCCCCCCCEEECCCEEEEEECCEEEECCCEEEEECCCEEEEEEEECCCCCEEEEE
YITKNIWGSSWENDLASLRVFMATLRKKIEKDVNSPQYIQTHIGIGYRMLRV
EEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECC
>Mature Secondary Structure
MNKTQILVVEDDSPIRNLITTTLKTNNYRYLTAVNGESAISQTASHNPDIILLDLGLPDI
CCCEEEEEEECCCHHHHHHHHEEECCCEEEEEEECCCHHHHHHCCCCCCEEEEECCCCCC
DGVEVIKKIRTWTNTPIIVISARTEDADKIEALDAGADDYLTKPFSVDELLARLRVTVRR
CHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHH
LSLMQTDMTQNTSVFENGDLKIDYAAGCAYLNGEELHLTPIEYKLLILLSRNVGRVLTYT
HHHHHHCCCCCCCEEECCCEEEEEECCEEEECCCEEEEECCCEEEEEEEECCCCCEEEEE
YITKNIWGSSWENDLASLRVFMATLRKKIEKDVNSPQYIQTHIGIGYRMLRV
EEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1532388; 8905232; 9278503 [H]