| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is uhpC [H]
Identifier: 238921614
GI number: 238921614
Start: 3652737
End: 3654077
Strand: Reverse
Name: uhpC [H]
Synonym: NT01EI_3769
Alternate gene names: 238921614
Gene position: 3654077-3652737 (Counterclockwise)
Preceding gene: 238921615
Following gene: 238921612
Centisome position: 95.85
GC content: 56.97
Gene sequence:
>1341_bases ATGTGGTCTTTTCTGAAAAGCCGCACCGACGCACCCGAGATTCAGGATAGTGCCAAGGTTGATGCTGCCTATAAATATTG GCGCATCCAGCTGATGTGGGTCATGTATGTTGGCTACGCCGCTTTTTACTTTACCCGCAAAAGCTTCAACTTCATCATGC CGGAAATGATAAGTGATCTGGGGCTGAGCATGTCCGATATCGGCATCATGGGCACGCTGTTCTATATCACCTATGGCTGT TCCAAGTTTATCTCCGGGATGATCAGCGATCGTTCCAACCCACGCTATTTTATGGGGTTGGGGCTGATCATGACCGGTAT TATCAATATCGTCTTCGGGATGAGTTCGTCGCTGCTGGTGCTGGGGGCGCTGTGGATGGTGAACGCCTTCTTCCAGGGCT GGGGCTGGCCGCCGTGCTCGAAGATCCTGACCAGCTGGTATTCACGCGCCGAACGCGGCAGCTGGTGGGCCATCTGGAAT ACTTCCCATAATGTCGGCGGCGCGCTGATCCCGCTGCTGGTCGGTTTTATCTCCCTGCACTTCAGCTGGCGCTATGGGAT GATCATCCCCGGGATTATCGGGATTGTACTGGGGCTGCTGATGTGCTGGCGCCTGCGCGACAAGCCGGTCACGATGGGGT TGCCGAGCGTCGGAAAATGGCGTAATGACGCCCTTGAGCTGGTGCAGGAGTCCGAAGGCAAGGGGCTATCCAATAAAGAG ATCATCAAGCGCTATGTGCTGACGAATAAGTACATCTGGCTGCTGGCAGTCTCTTATGTTCTGGTATATATCGTGCGTAC CGCGATCAATGACTGGGGAAACCTGTACCTGACCCAGACCAAGGGCTACTCGCTGATGACTGCCAACTCGGCGCTGTCGC TATTTGAGGTGGGGGGCTTTATCGGGTCTCTGGTCGCCGGCTGGGGCTCAGACAGGTTGTTCCGCGGCAACCGTGGTCCC ATGAACCTGATCTTCGCTATCGGGATCTTCCTCTCTGTGGCCGCGCTGTGGCTGATGCCGGGCGGCAGCTATGCGCTGCA GGCCGCCTGTTTCTTCTCTATCGGTTTCTTCATCTTTGGCCCGCAGATGCTGATCGGGATGGCCGCTGCCGAGTGTTCCC ATAAGGATGCGGCTGGCGCGGCGACCGGTTTTGTCGGCCTGTTCGCCTATCTGGGAGCAGCGCTTTCCGGCTATCCGATC GCCCGGGTGATGGAAGTGTGGCACTGGAACGGCTTTTTCGTCGTGATTTCCGTAGCGGCCTGTCTGTCCGCGCTGTTTCT GCTGCCGTTCCTGCGTGCACAGAAAGACCGGGAGCAAAACGCCACCGGCGGTGCAGGTTAA
Upstream 100 bases:
>100_bases TTTCTTAGTGCCAGCGGGAGATTTGTATTAGTTATCCCGTGCGTGCGCGACGCACCATAGCGTCTACAACGATGAGTTTT CACGCACGAGGTATTTCCCC
Downstream 100 bases:
>100_bases CGCTTGAGTTCGCTGTGTGTGGTTCGATAAAAAAAGCATGGCTTCGGCCATGCTTTTTGCTATCTGAAGGCGGTGAACTG TGGCTAAAATGCAGACAACG
Product: regulatory protein UhpC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 446; Mature: 446
Protein sequence:
>446_residues MWSFLKSRTDAPEIQDSAKVDAAYKYWRIQLMWVMYVGYAAFYFTRKSFNFIMPEMISDLGLSMSDIGIMGTLFYITYGC SKFISGMISDRSNPRYFMGLGLIMTGIINIVFGMSSSLLVLGALWMVNAFFQGWGWPPCSKILTSWYSRAERGSWWAIWN TSHNVGGALIPLLVGFISLHFSWRYGMIIPGIIGIVLGLLMCWRLRDKPVTMGLPSVGKWRNDALELVQESEGKGLSNKE IIKRYVLTNKYIWLLAVSYVLVYIVRTAINDWGNLYLTQTKGYSLMTANSALSLFEVGGFIGSLVAGWGSDRLFRGNRGP MNLIFAIGIFLSVAALWLMPGGSYALQAACFFSIGFFIFGPQMLIGMAAAECSHKDAAGAATGFVGLFAYLGAALSGYPI ARVMEVWHWNGFFVVISVAACLSALFLLPFLRAQKDREQNATGGAG
Sequences:
>Translated_446_residues MWSFLKSRTDAPEIQDSAKVDAAYKYWRIQLMWVMYVGYAAFYFTRKSFNFIMPEMISDLGLSMSDIGIMGTLFYITYGC SKFISGMISDRSNPRYFMGLGLIMTGIINIVFGMSSSLLVLGALWMVNAFFQGWGWPPCSKILTSWYSRAERGSWWAIWN TSHNVGGALIPLLVGFISLHFSWRYGMIIPGIIGIVLGLLMCWRLRDKPVTMGLPSVGKWRNDALELVQESEGKGLSNKE IIKRYVLTNKYIWLLAVSYVLVYIVRTAINDWGNLYLTQTKGYSLMTANSALSLFEVGGFIGSLVAGWGSDRLFRGNRGP MNLIFAIGIFLSVAALWLMPGGSYALQAACFFSIGFFIFGPQMLIGMAAAECSHKDAAGAATGFVGLFAYLGAALSGYPI ARVMEVWHWNGFFVVISVAACLSALFLLPFLRAQKDREQNATGGAG >Mature_446_residues MWSFLKSRTDAPEIQDSAKVDAAYKYWRIQLMWVMYVGYAAFYFTRKSFNFIMPEMISDLGLSMSDIGIMGTLFYITYGC SKFISGMISDRSNPRYFMGLGLIMTGIINIVFGMSSSLLVLGALWMVNAFFQGWGWPPCSKILTSWYSRAERGSWWAIWN TSHNVGGALIPLLVGFISLHFSWRYGMIIPGIIGIVLGLLMCWRLRDKPVTMGLPSVGKWRNDALELVQESEGKGLSNKE IIKRYVLTNKYIWLLAVSYVLVYIVRTAINDWGNLYLTQTKGYSLMTANSALSLFEVGGFIGSLVAGWGSDRLFRGNRGP MNLIFAIGIFLSVAALWLMPGGSYALQAACFFSIGFFIFGPQMLIGMAAAECSHKDAAGAATGFVGLFAYLGAALSGYPI ARVMEVWHWNGFFVVISVAACLSALFLLPFLRAQKDREQNATGGAG
Specific function: UhpC is required for uhpT expression, it may act jointly with the uhpB signaling protein [H]
COG id: COG2271
COG function: function code G; Sugar phosphate permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Organophosphate:Pi antiporter (OPA) (TC 2.A.1.4) family [H]
Homologues:
Organism=Homo sapiens, GI256219598, Length=435, Percent_Identity=32.8735632183908, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI4503847, Length=435, Percent_Identity=32.8735632183908, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI256219483, Length=435, Percent_Identity=32.8735632183908, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI256219543, Length=448, Percent_Identity=31.4732142857143, Blast_Score=235, Evalue=6e-62, Organism=Homo sapiens, GI256219564, Length=364, Percent_Identity=32.4175824175824, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI46361976, Length=399, Percent_Identity=22.3057644110276, Blast_Score=90, Evalue=4e-18, Organism=Homo sapiens, GI14150047, Length=274, Percent_Identity=21.8978102189781, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI223717983, Length=409, Percent_Identity=25.9168704156479, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI38093649, Length=409, Percent_Identity=25.9168704156479, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI49619231, Length=455, Percent_Identity=23.7362637362637, Blast_Score=66, Evalue=7e-11, Organism=Escherichia coli, GI87082310, Length=438, Percent_Identity=65.7534246575342, Blast_Score=626, Evalue=0.0, Organism=Escherichia coli, GI1788573, Length=430, Percent_Identity=36.2790697674419, Blast_Score=292, Evalue=4e-80, Organism=Escherichia coli, GI2367259, Length=433, Percent_Identity=32.3325635103926, Blast_Score=190, Evalue=2e-49, Organism=Escherichia coli, GI2367379, Length=375, Percent_Identity=23.2, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI87082320, Length=306, Percent_Identity=22.8758169934641, Blast_Score=68, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17561094, Length=420, Percent_Identity=24.047619047619, Blast_Score=105, Evalue=5e-23, Organism=Caenorhabditis elegans, GI133930953, Length=449, Percent_Identity=24.4988864142539, Blast_Score=101, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17542316, Length=451, Percent_Identity=23.059866962306, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI133901856, Length=439, Percent_Identity=23.9179954441913, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI133901854, Length=439, Percent_Identity=23.9179954441913, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17539138, Length=319, Percent_Identity=23.1974921630094, Blast_Score=75, Evalue=8e-14, Organism=Drosophila melanogaster, GI24656861, Length=481, Percent_Identity=23.2848232848233, Blast_Score=92, Evalue=9e-19, Organism=Drosophila melanogaster, GI24656866, Length=481, Percent_Identity=23.2848232848233, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI45550478, Length=481, Percent_Identity=23.2848232848233, Blast_Score=91, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000849 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR021159 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 49451; Mature: 49451
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: PS50850 MFS ; PS00942 GLPT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWSFLKSRTDAPEIQDSAKVDAAYKYWRIQLMWVMYVGYAAFYFTRKSFNFIMPEMISDL CCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH GLSMSDIGIMGTLFYITYGCSKFISGMISDRSNPRYFMGLGLIMTGIINIVFGMSSSLLV CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHH LGALWMVNAFFQGWGWPPCSKILTSWYSRAERGSWWAIWNTSHNVGGALIPLLVGFISLH HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHH FSWRYGMIIPGIIGIVLGLLMCWRLRDKPVTMGLPSVGKWRNDALELVQESEGKGLSNKE HHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCHHH IIKRYVLTNKYIWLLAVSYVLVYIVRTAINDWGNLYLTQTKGYSLMTANSALSLFEVGGF HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCHHHHHHHHHH IGSLVAGWGSDRLFRGNRGPMNLIFAIGIFLSVAALWLMPGGSYALQAACFFSIGFFIFG HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH PQMLIGMAAAECSHKDAAGAATGFVGLFAYLGAALSGYPIARVMEVWHWNGFFVVISVAA HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHH CLSALFLLPFLRAQKDREQNATGGAG HHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MWSFLKSRTDAPEIQDSAKVDAAYKYWRIQLMWVMYVGYAAFYFTRKSFNFIMPEMISDL CCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH GLSMSDIGIMGTLFYITYGCSKFISGMISDRSNPRYFMGLGLIMTGIINIVFGMSSSLLV CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHH LGALWMVNAFFQGWGWPPCSKILTSWYSRAERGSWWAIWNTSHNVGGALIPLLVGFISLH HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHH FSWRYGMIIPGIIGIVLGLLMCWRLRDKPVTMGLPSVGKWRNDALELVQESEGKGLSNKE HHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCHHH IIKRYVLTNKYIWLLAVSYVLVYIVRTAINDWGNLYLTQTKGYSLMTANSALSLFEVGGF HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCHHHHHHHHHH IGSLVAGWGSDRLFRGNRGPMNLIFAIGIFLSVAALWLMPGGSYALQAACFFSIGFFIFG HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH PQMLIGMAAAECSHKDAAGAATGFVGLFAYLGAALSGYPIARVMEVWHWNGFFVVISVAA HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHH CLSALFLLPFLRAQKDREQNATGGAG HHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1569007; 11677609 [H]