| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
Click here to switch to the map view.
The map label for this gene is 238921481
Identifier: 238921481
GI number: 238921481
Start: 3519740
End: 3519862
Strand: Direct
Name: 238921481
Synonym: NT01EI_3633
Alternate gene names: NA
Gene position: 3519740-3519862 (Clockwise)
Preceding gene: 238921478
Following gene: 238921482
Centisome position: 92.33
GC content: 56.91
Gene sequence:
>123_bases GTGACTGCACTTCCTCTATCACCTTACGGCAGTACGCTGCGTTTTTTGCGGCTATATCCACGCCGCCGGGCAGAGAAAGG GCAAAACAGCAGCGCGATGATCACCGTGGGAGAGTCGACGTGA
Upstream 100 bases:
>100_bases TGATCGCTAAGTGGGTATGTTAGGCTGAGTCATGGGAAAACGAGCGCCCCAGAAAAGCAAACTCATTCCATAGCATATAA TTACATTCATAATAATCACT
Downstream 100 bases:
>100_bases ATGTATCCATCGCACTCCTATATCTTATCCCCACAGCGGTTATTATCGGGTATATCTATTGGTACACAATGAAGAGAGCG TCGCGGTTGTCTGCATCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 40; Mature: 39
Protein sequence:
>40_residues MTALPLSPYGSTLRFLRLYPRRRAEKGQNSSAMITVGEST
Sequences:
>Translated_40_residues MTALPLSPYGSTLRFLRLYPRRRAEKGQNSSAMITVGEST >Mature_39_residues TALPLSPYGSTLRFLRLYPRRRAEKGQNSSAMITVGEST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4457; Mature: 4326
Theoretical pI: Translated: 11.35; Mature: 11.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALPLSPYGSTLRFLRLYPRRRAEKGQNSSAMITVGEST CCCCCCCCCCHHHHHHHHCCHHHCCCCCCCCEEEEECCCC >Mature Secondary Structure TALPLSPYGSTLRFLRLYPRRRAEKGQNSSAMITVGEST CCCCCCCCCHHHHHHHHCCHHHCCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA