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The map label for this gene is tsgA

Identifier: 238921462

GI number: 238921462

Start: 3499769

End: 3500953

Strand: Direct

Name: tsgA

Synonym: NT01EI_3614

Alternate gene names: 238921462

Gene position: 3499769-3500953 (Clockwise)

Preceding gene: 238921460

Following gene: 238921465

Centisome position: 91.8

GC content: 56.62

Gene sequence:

>1185_bases
ATGACCGACAGCAATCGCATCCGCCTAACATGGATCAGTTTCTTCTCCTATGCGCTTACCGGCGCATTGGTGATTGTCAC
CGGGATGGTGATGGGAAATATCGCAGAGTACTTTAATCTGCCGATCTCCAGCATGAGTAATACCTTTACGTTCCTCAACA
CCGGGATTTTGGTTTCCATTTTCCTTAATGCCTGGCTGATGGAAATTATTCCGCTTAAACGTCAGCTCGTTTTTGGCTTT
ATCCTGATGATCCTTGCCATCGCCGGTCTGATGGTCGGGCACAATCTGGCCATCTTCTCCGCCTGCATGTTCGTGCTGGG
CGTGGTCAGCGGGATCACCATGTCGATCGGAACCTTCCTGATCACCCATATCTATACCGGGCGTCAGCGCGGCTCTCGCC
TGCTGTTTACCGACTCCTTCTTCAGCATGGCCGGGATGGTGTTCCCCATCATCGCCGCCACCCTGCTGGCACAGCACGTG
GCATGGTATTGGGTCTACGCCTGCATCGGCGTTCTGTATCTGGCCATCTTTATCCTGACGCTGTGCTCTGACTTCCCGCA
GCTGGGTAAGCAGGCCGTCGGCGACAGCCAGCCGGTCAGAAAGGAAAAGTGGGGGATCGGCGTTCTGTTCCTGTCGATCG
CGGCGCTCTGCTACATCCTCGGTCAGCTGGGCTTTATTCAGTGGGTACCGGAGTATGCCGCCAAGCGCTTCGGCATGAGC
ATTGAAGAGAGCGGCGGGCTGGTCAGTAACTTCTGGACCGCCTATATGGTCGGCATGTGGTTCTTCAGCGTCGCGCTGCG
CTTCTTCGATCTGCAGCGCATCGTCACGGTATTGGCCGCCCTTTCCACCTTTATGATGTACATGTTCGTCAGCAGCCAGC
AGAGCGCCATGCTGAGCATGTATATTCTGGGCCTGGGCTTTGTCAGCAGCGCTATCTATACCACGCTGATTACGCTGGGA
TCGCAGCAGACCAAGGTCTCCTCGCCGAAGCTGGTGAACTTTATCCTGACCTGCGGCACCATCGGCACCATGCTGACCTT
CGTCGTCACCGGCCCCATCGTCGCTCACAGCGGAGCCCATGCCGCGCTGGCGACGGCCAACGGTCTCTATCTGGTCGTTT
TTGTCATGTGCGTCCTGCTGGGGTTTGTCACCAAGCACCGCCTGCATGGTCACGCAGCCAAGTAG

Upstream 100 bases:

>100_bases
GCTATGTTAGGATGCGCACGCTTGGTGAAATCGACCCTTCTTGTCAGATCTTCCCACAAACACGCTTCTTTTTACCTTAT
ATACTGATACAGGGCTTGCT

Downstream 100 bases:

>100_bases
ACTGCGCCATACCCATAACAACGGGGCCTGCATGCAGGTCCCGTTTTTTTGCGCGCGCCGAACTCAGCGGCGGAAGTCGA
CGCGCTCCGCCTGCCGCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 393

Protein sequence:

>394_residues
MTDSNRIRLTWISFFSYALTGALVIVTGMVMGNIAEYFNLPISSMSNTFTFLNTGILVSIFLNAWLMEIIPLKRQLVFGF
ILMILAIAGLMVGHNLAIFSACMFVLGVVSGITMSIGTFLITHIYTGRQRGSRLLFTDSFFSMAGMVFPIIAATLLAQHV
AWYWVYACIGVLYLAIFILTLCSDFPQLGKQAVGDSQPVRKEKWGIGVLFLSIAALCYILGQLGFIQWVPEYAAKRFGMS
IEESGGLVSNFWTAYMVGMWFFSVALRFFDLQRIVTVLAALSTFMMYMFVSSQQSAMLSMYILGLGFVSSAIYTTLITLG
SQQTKVSSPKLVNFILTCGTIGTMLTFVVTGPIVAHSGAHAALATANGLYLVVFVMCVLLGFVTKHRLHGHAAK

Sequences:

>Translated_394_residues
MTDSNRIRLTWISFFSYALTGALVIVTGMVMGNIAEYFNLPISSMSNTFTFLNTGILVSIFLNAWLMEIIPLKRQLVFGF
ILMILAIAGLMVGHNLAIFSACMFVLGVVSGITMSIGTFLITHIYTGRQRGSRLLFTDSFFSMAGMVFPIIAATLLAQHV
AWYWVYACIGVLYLAIFILTLCSDFPQLGKQAVGDSQPVRKEKWGIGVLFLSIAALCYILGQLGFIQWVPEYAAKRFGMS
IEESGGLVSNFWTAYMVGMWFFSVALRFFDLQRIVTVLAALSTFMMYMFVSSQQSAMLSMYILGLGFVSSAIYTTLITLG
SQQTKVSSPKLVNFILTCGTIGTMLTFVVTGPIVAHSGAHAALATANGLYLVVFVMCVLLGFVTKHRLHGHAAK
>Mature_393_residues
TDSNRIRLTWISFFSYALTGALVIVTGMVMGNIAEYFNLPISSMSNTFTFLNTGILVSIFLNAWLMEIIPLKRQLVFGFI
LMILAIAGLMVGHNLAIFSACMFVLGVVSGITMSIGTFLITHIYTGRQRGSRLLFTDSFFSMAGMVFPIIAATLLAQHVA
WYWVYACIGVLYLAIFILTLCSDFPQLGKQAVGDSQPVRKEKWGIGVLFLSIAALCYILGQLGFIQWVPEYAAKRFGMSI
EESGGLVSNFWTAYMVGMWFFSVALRFFDLQRIVTVLAALSTFMMYMFVSSQQSAMLSMYILGLGFVSSAIYTTLITLGS
QQTKVSSPKLVNFILTCGTIGTMLTFVVTGPIVAHSGAHAALATANGLYLVVFVMCVLLGFVTKHRLHGHAAK

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TsgA family

Homologues:

Organism=Escherichia coli, GI1789764, Length=390, Percent_Identity=76.1538461538461, Blast_Score=598, Evalue=1e-172,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TSGA_EDWI9 (C5BGP5)

Other databases:

- EMBL:   CP001600
- RefSeq:   YP_002934977.1
- GeneID:   7961435
- GenomeReviews:   CP001600_GR
- KEGG:   eic:NT01EI_3614
- OMA:   TIDANKP
- ProtClustDB:   PRK03699
- HAMAP:   MF_01044
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196

Pfam domain/function: PF07690 MFS_1; SSF103473 MFS_gen_substrate_transporter

EC number: NA

Molecular weight: Translated: 43265; Mature: 43134

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1fe5ec70)-; HASH(0x1f64a3c4)-; HASH(0x1f60ced4)-; HASH(0x20536308)-; HASH(0x204db9dc)-; HASH(0x1e15ea0c)-; HASH(0x2010045c)-; HASH(0x1f8db0c4)-; HASH(0x2049dd48)-; HASH(0x201b6178)-; HASH(0x20103cec)-; HASH(0x20643a68)-;

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDSNRIRLTWISFFSYALTGALVIVTGMVMGNIAEYFNLPISSMSNTFTFLNTGILVSI
CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHH
FLNAWLMEIIPLKRQLVFGFILMILAIAGLMVGHNLAIFSACMFVLGVVSGITMSIGTFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
ITHIYTGRQRGSRLLFTDSFFSMAGMVFPIIAATLLAQHVAWYWVYACIGVLYLAIFILT
HHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LCSDFPQLGKQAVGDSQPVRKEKWGIGVLFLSIAALCYILGQLGFIQWVPEYAAKRFGMS
HHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
IEESGGLVSNFWTAYMVGMWFFSVALRFFDLQRIVTVLAALSTFMMYMFVSSQQSAMLSM
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
YILGLGFVSSAIYTTLITLGSQQTKVSSPKLVNFILTCGTIGTMLTFVVTGPIVAHSGAH
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AALATANGLYLVVFVMCVLLGFVTKHRLHGHAAK
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCH
>Mature Secondary Structure 
TDSNRIRLTWISFFSYALTGALVIVTGMVMGNIAEYFNLPISSMSNTFTFLNTGILVSI
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHH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HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA