| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is pabA [H]
Identifier: 238921460
GI number: 238921460
Start: 3498094
End: 3498669
Strand: Direct
Name: pabA [H]
Synonym: NT01EI_3612
Alternate gene names: 238921460
Gene position: 3498094-3498669 (Clockwise)
Preceding gene: 238921458
Following gene: 238921462
Centisome position: 91.76
GC content: 60.07
Gene sequence:
>576_bases ATGCTGCTGCTTATCGATAACTACGACTCCTTTACCTACAACCTGTACCAGTACTTTTGCCAGCTCGATGCTGAGGTCAT GGTAAAACGCAACGATGCGCTGACGCTGGCAGAGATCGATGCCATGCACCCATCGCATGTAGTGATCTCCCCCGGACCGG GTACGCCCGATCAGGCCGGTATTTCCCTTGCGGCCATCCGCCATCTGGCAGGACGCATTCCGCTGCTGGGGGTCTGCCTG GGGCACCAGGCGCTGGGACAGGTTTTCGGCGCGCGGGTGATCCGGGCGCGGCAGGTGATGCACGGTAAGACCAGCGCTAT CCGCCACCGCGATCGCGGCGTATTCCAGGGGCTGAATAACCCGCTGACGGTCACCCGCTACCATTCGCTGATTCTGGATA AGGAGAGCCTGCCCGACTGCCTGGAAGTGACAGCCTGGAGCGAACGCGATGGCGAGGTCGATGAGATAATGGGTGTTCGT CATACCGGCATGGCACTGGAGGGGGTTCAGTTCCATCCGGAAAGCATTCTTAGCGAGCAGGGACACGCCCTGCTGCGCAA CTTTCTGCGCCAGTAA
Upstream 100 bases:
>100_bases ACCGACACTGCGCAGGCTCCGCCAATCCCGGTCAAACGGGGCTGAATTTGTCCGGCGTATGCTTTATCATCACCGCTTTC CCGTAACGCCAGTCCATGCC
Downstream 100 bases:
>100_bases CACAGCGGGCGCCATCCGGCGCCCGCTGTGCGAAACCGCGCAGAAGCGCACAGCCTTACTTCATAACGCTGGCCGAGGTA ATCACGATCGGCTTGGCCGG
Product: para-aminobenzoate synthase glutamine amidotransferase, component II
Products: NA
Alternate protein names: ADC synthase [H]
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MLLLIDNYDSFTYNLYQYFCQLDAEVMVKRNDALTLAEIDAMHPSHVVISPGPGTPDQAGISLAAIRHLAGRIPLLGVCL GHQALGQVFGARVIRARQVMHGKTSAIRHRDRGVFQGLNNPLTVTRYHSLILDKESLPDCLEVTAWSERDGEVDEIMGVR HTGMALEGVQFHPESILSEQGHALLRNFLRQ
Sequences:
>Translated_191_residues MLLLIDNYDSFTYNLYQYFCQLDAEVMVKRNDALTLAEIDAMHPSHVVISPGPGTPDQAGISLAAIRHLAGRIPLLGVCL GHQALGQVFGARVIRARQVMHGKTSAIRHRDRGVFQGLNNPLTVTRYHSLILDKESLPDCLEVTAWSERDGEVDEIMGVR HTGMALEGVQFHPESILSEQGHALLRNFLRQ >Mature_191_residues MLLLIDNYDSFTYNLYQYFCQLDAEVMVKRNDALTLAEIDAMHPSHVVISPGPGTPDQAGISLAAIRHLAGRIPLLGVCL GHQALGQVFGARVIRARQVMHGKTSAIRHRDRGVFQGLNNPLTVTRYHSLILDKESLPDCLEVTAWSERDGEVDEIMGVR HTGMALEGVQFHPESILSEQGHALLRNFLRQ
Specific function: Catalyzes the biosynthesis of 4-amino-4-deoxychorismate (ADC) from chorismate and glutamine [H]
COG id: COG0512
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1789760, Length=191, Percent_Identity=70.1570680628272, Blast_Score=284, Evalue=3e-78, Organism=Escherichia coli, GI1787517, Length=191, Percent_Identity=41.3612565445026, Blast_Score=137, Evalue=3e-34, Organism=Escherichia coli, GI1786215, Length=135, Percent_Identity=29.6296296296296, Blast_Score=65, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6322638, Length=189, Percent_Identity=51.8518518518518, Blast_Score=206, Evalue=2e-54, Organism=Saccharomyces cerevisiae, GI6324361, Length=211, Percent_Identity=30.8056872037915, Blast_Score=77, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006220 - InterPro: IPR001317 - InterPro: IPR011702 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR006221 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: =2.6.1.85 [H]
Molecular weight: Translated: 21250; Mature: 21250
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLLIDNYDSFTYNLYQYFCQLDAEVMVKRNDALTLAEIDAMHPSHVVISPGPGTPDQAG CEEEEECCCCHHHHHHHHHHHCCHHHEEECCCCEEEEHHHCCCCCEEEEECCCCCCCHHH ISLAAIRHLAGRIPLLGVCLGHQALGQVFGARVIRARQVMHGKTSAIRHRDRGVFQGLNN HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC PLTVTRYHSLILDKESLPDCLEVTAWSERDGEVDEIMGVRHTGMALEGVQFHPESILSEQ CEEHHHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHCCCCCCCEECCCEECHHHHHHHC GHALLRNFLRQ CHHHHHHHHCC >Mature Secondary Structure MLLLIDNYDSFTYNLYQYFCQLDAEVMVKRNDALTLAEIDAMHPSHVVISPGPGTPDQAG CEEEEECCCCHHHHHHHHHHHCCHHHEEECCCCEEEEHHHCCCCCEEEEECCCCCCCHHH ISLAAIRHLAGRIPLLGVCLGHQALGQVFGARVIRARQVMHGKTSAIRHRDRGVFQGLNN HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC PLTVTRYHSLILDKESLPDCLEVTAWSERDGEVDEIMGVRHTGMALEGVQFHPESILSEQ CEEHHHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHCCCCCCCEECCCEECHHHHHHHC GHALLRNFLRQ CHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3894673 [H]