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The map label for this gene is tdcA [C]

Identifier: 238921256

GI number: 238921256

Start: 3285269

End: 3286273

Strand: Direct

Name: tdcA [C]

Synonym: NT01EI_3399

Alternate gene names: 238921256

Gene position: 3285269-3286273 (Clockwise)

Preceding gene: 238921255

Following gene: 238921268

Centisome position: 86.18

GC content: 60.2

Gene sequence:

>1005_bases
ATGATCGCTACCGGTGAACACGACACCGCAACAGGTGACGCCATGTCGCACGATAATTTCCTGAAGTCCATGTATGACAC
CCATTACGCCGCCCTGATCGCCCTGACTGCGCTAAATGAAGAGCAGAGCGTCGGCCGGGCTGCCGAGTGTCTGGGCATCA
GCCAGCCCTCCATGAGCAAGCTGCTGATGGAGCTGCGCAAAGAGTTCAACGATCCGCTGTACACCAAGTGCAATAATCTA
TTTACCCTGACTCCGGTCGGCGAGACCCTGTGCACCATCGTGCGCAATACACTGTACGCCAGCCAGTCGATGATCGACCA
GCTGCGCTGTGGGGTGAAACACCGCTATAACATCTGCCTGCCCCACTGGTTCAATATCCAGGAGGTCTCCGCCCTGATCG
GCAACGTGCGCACCCTGTACCCCAACCTGGTGATCAACTTCCGGCCGCCCAGCGCCACCACCGCAGAAGACATCGTGCAA
AGCCTGAAGCAGGGTAACGTGGACGTCGCCGTACGCCACTTTCCCCACGCCTGCCCCAGCGGTATTCACCTGAAGACGCT
CGGCTCCTCCGAATTCATGTTCCTGCGCCGCGTCCATGCCATCGGCCAACAACCGACGCAGGTGCTGACCATGACCCGCG
AGCAGCTGCTCTGCACGCCGCTGATTCTCTACAATATCAGCCCCTACCTGCAGGACAGCTTCCTGCAGGCCAACCGCCTG
GATGAGGGACTGCTGAATATCACCATGACCCTGACCAACAACTTCCGCCGCTGGCTGGATGAGCTGGTGGACCATGATAC
CCTGCTGATAACGCTGCGCAGCATCGGCGAAACACTGCTCGAAAGCGGAGAGTACCGGGCGGTCACCATTCCCGGCATGG
CCATCCACTTCCCGTATCATCTGATGTGGCACGAGCGCTCGTCGCAGGATCCGGTCCACCACCTGATCCGCAAGGCGCTG
ATCGCCATGGGCAGCGCCAGCCGTCCTCTGGCAGCGGAGCGCTGA

Upstream 100 bases:

>100_bases
AGGTGCTGTTTAGTCCCCACGGCGTCAGCGGCGGCGTACGGGTCGCCCGCTAACCCCGCCCCTATTTTCTACGGTCGGCC
GCCGCGCGGTCGGCCTGTCT

Downstream 100 bases:

>100_bases
GGCACGGGCGGCTGCCGTTTTTACCGCGATCAGACCAGGACGTCTCCCGTCACTGCGCGTGGCGCCGACGCTCACGACCC
GTTACGGGACACGCTCTGGA

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator LysR Family; Transcriptional Regulator; Transcriptional Regulator Lysr Family

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MIATGEHDTATGDAMSHDNFLKSMYDTHYAALIALTALNEEQSVGRAAECLGISQPSMSKLLMELRKEFNDPLYTKCNNL
FTLTPVGETLCTIVRNTLYASQSMIDQLRCGVKHRYNICLPHWFNIQEVSALIGNVRTLYPNLVINFRPPSATTAEDIVQ
SLKQGNVDVAVRHFPHACPSGIHLKTLGSSEFMFLRRVHAIGQQPTQVLTMTREQLLCTPLILYNISPYLQDSFLQANRL
DEGLLNITMTLTNNFRRWLDELVDHDTLLITLRSIGETLLESGEYRAVTIPGMAIHFPYHLMWHERSSQDPVHHLIRKAL
IAMGSASRPLAAER

Sequences:

>Translated_334_residues
MIATGEHDTATGDAMSHDNFLKSMYDTHYAALIALTALNEEQSVGRAAECLGISQPSMSKLLMELRKEFNDPLYTKCNNL
FTLTPVGETLCTIVRNTLYASQSMIDQLRCGVKHRYNICLPHWFNIQEVSALIGNVRTLYPNLVINFRPPSATTAEDIVQ
SLKQGNVDVAVRHFPHACPSGIHLKTLGSSEFMFLRRVHAIGQQPTQVLTMTREQLLCTPLILYNISPYLQDSFLQANRL
DEGLLNITMTLTNNFRRWLDELVDHDTLLITLRSIGETLLESGEYRAVTIPGMAIHFPYHLMWHERSSQDPVHHLIRKAL
IAMGSASRPLAAER
>Mature_334_residues
MIATGEHDTATGDAMSHDNFLKSMYDTHYAALIALTALNEEQSVGRAAECLGISQPSMSKLLMELRKEFNDPLYTKCNNL
FTLTPVGETLCTIVRNTLYASQSMIDQLRCGVKHRYNICLPHWFNIQEVSALIGNVRTLYPNLVINFRPPSATTAEDIVQ
SLKQGNVDVAVRHFPHACPSGIHLKTLGSSEFMFLRRVHAIGQQPTQVLTMTREQLLCTPLILYNISPYLQDSFLQANRL
DEGLLNITMTLTNNFRRWLDELVDHDTLLITLRSIGETLLESGEYRAVTIPGMAIHFPYHLMWHERSSQDPVHHLIRKAL
IAMGSASRPLAAER

Specific function: Transcriptional Activator For The Tdcabcde Operon. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37658; Mature: 37658

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIATGEHDTATGDAMSHDNFLKSMYDTHYAALIALTALNEEQSVGRAAECLGISQPSMSK
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHH
LLMELRKEFNDPLYTKCNNLFTLTPVGETLCTIVRNTLYASQSMIDQLRCGVKHRYNICL
HHHHHHHHHCCCHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCEEEC
PHWFNIQEVSALIGNVRTLYPNLVINFRPPSATTAEDIVQSLKQGNVDVAVRHFPHACPS
CCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCC
GIHLKTLGSSEFMFLRRVHAIGQQPTQVLTMTREQLLCTPLILYNISPYLQDSFLQANRL
CCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
DEGLLNITMTLTNNFRRWLDELVDHDTLLITLRSIGETLLESGEYRAVTIPGMAIHFPYH
CCCHHEEEEHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCEEEEEECCEEEECCEE
LMWHERSSQDPVHHLIRKALIAMGSASRPLAAER
EEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MIATGEHDTATGDAMSHDNFLKSMYDTHYAALIALTALNEEQSVGRAAECLGISQPSMSK
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHH
LLMELRKEFNDPLYTKCNNLFTLTPVGETLCTIVRNTLYASQSMIDQLRCGVKHRYNICL
HHHHHHHHHCCCHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCEEEC
PHWFNIQEVSALIGNVRTLYPNLVINFRPPSATTAEDIVQSLKQGNVDVAVRHFPHACPS
CCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCC
GIHLKTLGSSEFMFLRRVHAIGQQPTQVLTMTREQLLCTPLILYNISPYLQDSFLQANRL
CCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
DEGLLNITMTLTNNFRRWLDELVDHDTLLITLRSIGETLLESGEYRAVTIPGMAIHFPYH
CCCHHEEEEHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCEEEEEECCEEEECCEE
LMWHERSSQDPVHHLIRKALIAMGSASRPLAAER
EEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA