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The map label for this gene is cfa [H]

Identifier: 238921255

GI number: 238921255

Start: 3284076

End: 3285221

Strand: Direct

Name: cfa [H]

Synonym: NT01EI_3398

Alternate gene names: 238921255

Gene position: 3284076-3285221 (Clockwise)

Preceding gene: 238921252

Following gene: 238921256

Centisome position: 86.14

GC content: 59.16

Gene sequence:

>1146_bases
ATGAATACCGTTGTCAATGAAATAGAGGATCAGTCCCGCAGCTACCATATTTTGCAGCCATTACTGCAGCAGGCTGGCAT
AGGCCTTGAGGGGCAGCAGCCCTATGACCTGCAGATCCATAACCCGCAGCTGTTCTCCACCGTGCTGAAAGGCGGCTCCC
TGGGGCTGGGTGAGAGCTATATGGACGGCTGGTGGGACTGCGAACGTCTGGACATGTTTTTTGACCGCGCCCTACGCCAC
GGTCTGGACAAGACGCTGCCCGCTAACCTTAACGATCTGATCTATGCCATCAGCACCCGTCTGTTTAACCTGCAGTCGCG
CCGACGCGCTGGTCAGGTCGCCCGCGAGCACTACGATCTGGGCAACGATCTGTTTGAGGCCATACTCGATCCCCACATGC
AATACTCCTGCGCCTACTGGAAAGAGGCCAAAACGCTGGATCAGGCCCAGGAGGCCAAGCTGGATCTGATCTGCCGCAAG
CTCGATCTGCAGCCGGGTCAGCGGGTGCTCGACATCGGCTGCGGCTGGGGGGGACTGGCGGCGTACATGGCCCGTAACTA
CGGCGTGGAAGTCACCGGGATCACCATCTCGCAGGAGCAGTTAGAGCTGGCCCGCCAGCGCTGCGCCGGTCTGCCGGTCA
CCCTGCATCTGATGGACTACCGCGATCTGGATGAGCCATTTGAGCGCATCGTCTCCGTCGGCATGTTTGAGCACGTCGGA
CCCAAAAACTACGCCGCCTACTTCAATACGGTCAAACGCTGCCTACGCCCTGAAGGACGTTTTCTGCTGCACACCATCGG
CAGTAATATCTCCGATCACGGTGTCGATCCCTGGATTAACCGCTATATTTTCCCTAATGGACGCCTGCCCTCCATACGCG
ATATCGCCTGCGGCAGCGAGGGGATGATGGTCATGGAAGACTGGCACAATTTGGGGAGCGATTACGATAAGACGCTGATG
GCATGGGAGGCCCGCTTTCGCGCCGCTTGGCCACAGCTGAAGGATCGTTACGGCGAGCGTTTTTACCGTATGTTCCGTTA
CTATCTCTGTGCCTGTGCCGGCGCCTTCCGCGCCCGGGATATCCAGCTGTGGCAGGTGCTGTTTAGTCCCCACGGCGTCA
GCGGCGGCGTACGGGTCGCCCGCTAA

Upstream 100 bases:

>100_bases
TTTTATTCCATTGATTTATTCTAATTGAGAATTTTTATATGCTTTGTTATCGATAACAAACGGTGGATATTATGCAAAAA
AATTCACCGCAGGAATAAAT

Downstream 100 bases:

>100_bases
CCCCGCCCCTATTTTCTACGGTCGGCCGCCGCGCGGTCGGCCTGTCTATGATCGCTACCGGTGAACACGACACCGCAACA
GGTGACGCCATGTCGCACGA

Product: cyclopropane fatty acyl phospholipid synthase

Products: NA

Alternate protein names: CFA synthase; Cyclopropane fatty acid synthase [H]

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MNTVVNEIEDQSRSYHILQPLLQQAGIGLEGQQPYDLQIHNPQLFSTVLKGGSLGLGESYMDGWWDCERLDMFFDRALRH
GLDKTLPANLNDLIYAISTRLFNLQSRRRAGQVAREHYDLGNDLFEAILDPHMQYSCAYWKEAKTLDQAQEAKLDLICRK
LDLQPGQRVLDIGCGWGGLAAYMARNYGVEVTGITISQEQLELARQRCAGLPVTLHLMDYRDLDEPFERIVSVGMFEHVG
PKNYAAYFNTVKRCLRPEGRFLLHTIGSNISDHGVDPWINRYIFPNGRLPSIRDIACGSEGMMVMEDWHNLGSDYDKTLM
AWEARFRAAWPQLKDRYGERFYRMFRYYLCACAGAFRARDIQLWQVLFSPHGVSGGVRVAR

Sequences:

>Translated_381_residues
MNTVVNEIEDQSRSYHILQPLLQQAGIGLEGQQPYDLQIHNPQLFSTVLKGGSLGLGESYMDGWWDCERLDMFFDRALRH
GLDKTLPANLNDLIYAISTRLFNLQSRRRAGQVAREHYDLGNDLFEAILDPHMQYSCAYWKEAKTLDQAQEAKLDLICRK
LDLQPGQRVLDIGCGWGGLAAYMARNYGVEVTGITISQEQLELARQRCAGLPVTLHLMDYRDLDEPFERIVSVGMFEHVG
PKNYAAYFNTVKRCLRPEGRFLLHTIGSNISDHGVDPWINRYIFPNGRLPSIRDIACGSEGMMVMEDWHNLGSDYDKTLM
AWEARFRAAWPQLKDRYGERFYRMFRYYLCACAGAFRARDIQLWQVLFSPHGVSGGVRVAR
>Mature_381_residues
MNTVVNEIEDQSRSYHILQPLLQQAGIGLEGQQPYDLQIHNPQLFSTVLKGGSLGLGESYMDGWWDCERLDMFFDRALRH
GLDKTLPANLNDLIYAISTRLFNLQSRRRAGQVAREHYDLGNDLFEAILDPHMQYSCAYWKEAKTLDQAQEAKLDLICRK
LDLQPGQRVLDIGCGWGGLAAYMARNYGVEVTGITISQEQLELARQRCAGLPVTLHLMDYRDLDEPFERIVSVGMFEHVG
PKNYAAYFNTVKRCLRPEGRFLLHTIGSNISDHGVDPWINRYIFPNGRLPSIRDIACGSEGMMVMEDWHNLGSDYDKTLM
AWEARFRAAWPQLKDRYGERFYRMFRYYLCACAGAFRARDIQLWQVLFSPHGVSGGVRVAR

Specific function: Transfers a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge [H]

COG id: COG2230

COG function: function code M; Cyclopropane fatty acid synthase and related methyltransferases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CFA/CMAS family [H]

Homologues:

Organism=Escherichia coli, GI1787951, Length=367, Percent_Identity=65.3950953678474, Blast_Score=507, Evalue=1e-145,
Organism=Caenorhabditis elegans, GI133904226, Length=384, Percent_Identity=30.9895833333333, Blast_Score=157, Evalue=1e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003333 [H]

Pfam domain/function: PF02353 CMAS [H]

EC number: =2.1.1.79 [H]

Molecular weight: Translated: 43715; Mature: 43715

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTVVNEIEDQSRSYHILQPLLQQAGIGLEGQQPYDLQIHNPQLFSTVLKGGSLGLGESY
CCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHCCCCCCCCCHH
MDGWWDCERLDMFFDRALRHGLDKTLPANLNDLIYAISTRLFNLQSRRRAGQVAREHYDL
HCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GNDLFEAILDPHMQYSCAYWKEAKTLDQAQEAKLDLICRKLDLQPGQRVLDIGCGWGGLA
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHH
AYMARNYGVEVTGITISQEQLELARQRCAGLPVTLHLMDYRDLDEPFERIVSVGMFEHVG
HHHHHCCCEEEEEEEECHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCC
PKNYAAYFNTVKRCLRPEGRFLLHTIGSNISDHGVDPWINRYIFPNGRLPSIRDIACGSE
CHHHHHHHHHHHHHHCCCCCEEEEHHCCCCCCCCCCHHHHCEECCCCCCCCCHHHCCCCC
GMMVMEDWHNLGSDYDKTLMAWEARFRAAWPQLKDRYGERFYRMFRYYLCACAGAFRARD
CCEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQLWQVLFSPHGVSGGVRVAR
HHHHHHHHCCCCCCCCCEECC
>Mature Secondary Structure
MNTVVNEIEDQSRSYHILQPLLQQAGIGLEGQQPYDLQIHNPQLFSTVLKGGSLGLGESY
CCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHCCCCCCCCCHH
MDGWWDCERLDMFFDRALRHGLDKTLPANLNDLIYAISTRLFNLQSRRRAGQVAREHYDL
HCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GNDLFEAILDPHMQYSCAYWKEAKTLDQAQEAKLDLICRKLDLQPGQRVLDIGCGWGGLA
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHH
AYMARNYGVEVTGITISQEQLELARQRCAGLPVTLHLMDYRDLDEPFERIVSVGMFEHVG
HHHHHCCCEEEEEEEECHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCC
PKNYAAYFNTVKRCLRPEGRFLLHTIGSNISDHGVDPWINRYIFPNGRLPSIRDIACGSE
CHHHHHHHHHHHHHHCCCCCEEEEHHCCCCCCCCCCHHHHCEECCCCCCCCCHHHCCCCC
GMMVMEDWHNLGSDYDKTLMAWEARFRAAWPQLKDRYGERFYRMFRYYLCACAGAFRARD
CCEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQLWQVLFSPHGVSGGVRVAR
HHHHHHHHCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]