| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is surE
Identifier: 238921114
GI number: 238921114
Start: 3131368
End: 3132132
Strand: Reverse
Name: surE
Synonym: NT01EI_3253
Alternate gene names: 238921114
Gene position: 3132132-3131368 (Counterclockwise)
Preceding gene: 238921115
Following gene: 238921113
Centisome position: 82.16
GC content: 65.36
Gene sequence:
>765_bases ATGCGGATCTTGCTGAGTAATGATGATGGTGTAACGGCTCCCGGTATTCAGACGCTGGCAGCGGCGCTACGAGAGTTTGC CCAGGTGCAGGTCGTCGCTCCGAACCGCAATCGCAGCGGGTCGTCCAATGCCCTGACGCTGGAGTCACCGCTGCGCAGCG AAACCTTGGCCAACGGCGACATCAGCGTGATCGACGGTACGCCGACCGACTGCGTCTATCTGGGGGTCAATGCGTTGATG CGCCCGCGCCCGGATATCGTGATCGCCGGTATCAACGCTGGCCCTAACCTGGGAGATGACGTGATCTACTCCGGCACGGT GGCGGCGGCGATGGAGGGGCGCCATCTGGGCTTTCCTGCGCTGGCGGTATCTCTGGACGGTGAGCGTCACTATGACACGG CGGCGGCGGTCACCTGCCGACTGTTGCGTATGCTGTCTGATGCACCGCTGCGCAGTGGGCGCATTCTGAATGTGAATGTG CCGGACGTCCCACTGACGGCGATCCGAGGCTGGCGCGTAACCCGCTGCGGCAGCCGTCATCCGGCGCAGACGGTGATCCA TCAGCAGGATCCGCGCGGTAAGCCGCTGATGTGGATCGGTCCGCCGGGGGCCAAGCAGGACGCCGGTGAAGAGACCGATT TCGCCGCCGTGGCGGCGGGCTATATCTCCGTGACGCCACTGCAGGTGGATCTGACCGCCCACGGTGCGCGTGGCCGCCTG GCGGAGTGGCTGGGCCGGGTGGATAAGGGCGGTGCGGCATGGTAG
Upstream 100 bases:
>100_bases AGCTGGTGGGATGACGCCACCGTCGAGCTGACCTTCGATCTGCCCGCCGGTAGTTTCGCCACCAGCGTAGTGCGTGAACT GTTCTGTCAGGAAAACTCCG
Downstream 100 bases:
>100_bases ATGTTGATCGCCGGGTTCTGCTGCTGATCCAGCAGCTGATGCGTCAGGGGATCCGCGATGAGGCGGTGCTGAAAGCCATT GCTTCTGTGCCGCGCGAGCG
Product: stationary phase survival protein SurE
Products: NA
Alternate protein names: 5'/3'-nucleotidase; Nucleoside monophosphate phosphohydrolase; Exopolyphosphatase
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MRILLSNDDGVTAPGIQTLAAALREFAQVQVVAPNRNRSGSSNALTLESPLRSETLANGDISVIDGTPTDCVYLGVNALM RPRPDIVIAGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGERHYDTAAAVTCRLLRMLSDAPLRSGRILNVNV PDVPLTAIRGWRVTRCGSRHPAQTVIHQQDPRGKPLMWIGPPGAKQDAGEETDFAAVAAGYISVTPLQVDLTAHGARGRL AEWLGRVDKGGAAW
Sequences:
>Translated_254_residues MRILLSNDDGVTAPGIQTLAAALREFAQVQVVAPNRNRSGSSNALTLESPLRSETLANGDISVIDGTPTDCVYLGVNALM RPRPDIVIAGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGERHYDTAAAVTCRLLRMLSDAPLRSGRILNVNV PDVPLTAIRGWRVTRCGSRHPAQTVIHQQDPRGKPLMWIGPPGAKQDAGEETDFAAVAAGYISVTPLQVDLTAHGARGRL AEWLGRVDKGGAAW >Mature_254_residues MRILLSNDDGVTAPGIQTLAAALREFAQVQVVAPNRNRSGSSNALTLESPLRSETLANGDISVIDGTPTDCVYLGVNALM RPRPDIVIAGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGERHYDTAAAVTCRLLRMLSDAPLRSGRILNVNV PDVPLTAIRGWRVTRCGSRHPAQTVIHQQDPRGKPLMWIGPPGAKQDAGEETDFAAVAAGYISVTPLQVDLTAHGARGRL AEWLGRVDKGGAAW
Specific function: Nucleotidase with a broad substrate specificity as it can dephosphorylate various ribo- and deoxyribonucleoside 5'- monophosphates and ribonucleoside 3'-monophosphates with highest affinity to 3'-AMP. Also hydrolyzes polyphosphate (exopolyphosphatase acti
COG id: COG0496
COG function: function code R; Predicted acid phosphatase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surE nucleotidase family
Homologues:
Organism=Escherichia coli, GI1789101, Length=250, Percent_Identity=76.8, Blast_Score=389, Evalue=1e-109,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SURE_EDWI9 (C5BGI8)
Other databases:
- EMBL: CP001600 - RefSeq: YP_002934629.1 - ProteinModelPortal: C5BGI8 - GeneID: 7961086 - GenomeReviews: CP001600_GR - KEGG: eic:NT01EI_3253 - OMA: NGFYYVN - ProtClustDB: PRK00346 - GO: GO:0005737 - HAMAP: MF_00060 - InterPro: IPR002828 - Gene3D: G3DSA:3.40.1210.10 - TIGRFAMs: TIGR00087
Pfam domain/function: PF01975 SurE; SSF64167 SurE-like_Pase/nucleotidase
EC number: =3.1.3.5; =3.1.3.6; =3.6.1.11
Molecular weight: Translated: 26839; Mature: 26839
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILLSNDDGVTAPGIQTLAAALREFAQVQVVAPNRNRSGSSNALTLESPLRSETLANGD CEEEEECCCCCCCCCHHHHHHHHHHHHEEEEECCCCCCCCCCCEEEECCCCCHHHCCCCC ISVIDGTPTDCVYLGVNALMRPRPDIVIAGINAGPNLGDDVIYSGTVAAAMEGRHLGFPA EEEECCCCCCEEEECHHHHCCCCCCEEEEECCCCCCCCCCEEECCEEEEEECCCCCCCCE LAVSLDGERHYDTAAAVTCRLLRMLSDAPLRSGRILNVNVPDVPLTAIRGWRVTRCGSRH EEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHCCEEEEECCCCC PAQTVIHQQDPRGKPLMWIGPPGAKQDAGEETDFAAVAAGYISVTPLQVDLTAHGARGRL CHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCHHHEEECEEEEEEEEEEEECCCCCCHH AEWLGRVDKGGAAW HHHHCCCCCCCCCC >Mature Secondary Structure MRILLSNDDGVTAPGIQTLAAALREFAQVQVVAPNRNRSGSSNALTLESPLRSETLANGD CEEEEECCCCCCCCCHHHHHHHHHHHHEEEEECCCCCCCCCCCEEEECCCCCHHHCCCCC ISVIDGTPTDCVYLGVNALMRPRPDIVIAGINAGPNLGDDVIYSGTVAAAMEGRHLGFPA EEEECCCCCCEEEECHHHHCCCCCCEEEEECCCCCCCCCCEEECCEEEEEECCCCCCCCE LAVSLDGERHYDTAAAVTCRLLRMLSDAPLRSGRILNVNVPDVPLTAIRGWRVTRCGSRH EEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHCCEEEEECCCCC PAQTVIHQQDPRGKPLMWIGPPGAKQDAGEETDFAAVAAGYISVTPLQVDLTAHGARGRL CHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCHHHEEECEEEEEEEEEEEECCCCCCHH AEWLGRVDKGGAAW HHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA