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The map label for this gene is yqaA [H]

Identifier: 238921094

GI number: 238921094

Start: 3106544

End: 3106945

Strand: Reverse

Name: yqaA [H]

Synonym: NT01EI_3230

Alternate gene names: 238921094

Gene position: 3106945-3106544 (Counterclockwise)

Preceding gene: 238921095

Following gene: 238921093

Centisome position: 81.5

GC content: 64.18

Gene sequence:

>402_bases
ATGTTTGTCAGCAGTTTTACCAGCGCGACGCTGCTGCCGGGTAATTCAGAGGTGGTACTGACCGGGCTACTGATCGCGGC
TCAGGCGCCGCTGCTCTGGCTGATGGCGGCGGCGATCGTGGGTAACGTGCTGGGCGGACTGACCAATGTGGTCATTGGTA
GGGCGCTGCCCCAGCTGACGCCGCAGCGCGGGCTGGCGATAGCGTTGGGCTGGATGCAGCGCTACGGCGCCGCGGCGCTG
TTGCTCAGCTGGCTGCCACTGATCGGCGATTTGCTGTGCCTCTTGGCCGGGTGGCTACGGATGCCGTGGGGAAAGGTCGC
GCTGTATCTGACCCTGGGTAAGGCTGCACGCTATGCGGTGCTGGCATGGTTGACGCTGTACGGCATGTCGTGGTGGCATT
AG

Upstream 100 bases:

>100_bases
TTGAGGATGCGGATTTGGGGATTCAGGCCGCCCAGCGAGCGGGGATGGAGTGGATCGACGTGCGCGACCTGTAATGAGTG
AATTTTGGGCTGTCACTGGC

Downstream 100 bases:

>100_bases
GCGTCCATTGCGGTAAGACGCGGTGGGCGCGATTAACTCTTCTTATTAGCGGGAGGTCAATTTGATCCCGGACGTATCTC
AGGCCCTTAGCTGGCTGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MFVSSFTSATLLPGNSEVVLTGLLIAAQAPLLWLMAAAIVGNVLGGLTNVVIGRALPQLTPQRGLAIALGWMQRYGAAAL
LLSWLPLIGDLLCLLAGWLRMPWGKVALYLTLGKAARYAVLAWLTLYGMSWWH

Sequences:

>Translated_133_residues
MFVSSFTSATLLPGNSEVVLTGLLIAAQAPLLWLMAAAIVGNVLGGLTNVVIGRALPQLTPQRGLAIALGWMQRYGAAAL
LLSWLPLIGDLLCLLAGWLRMPWGKVALYLTLGKAARYAVLAWLTLYGMSWWH
>Mature_133_residues
MFVSSFTSATLLPGNSEVVLTGLLIAAQAPLLWLMAAAIVGNVLGGLTNVVIGRALPQLTPQRGLAIALGWMQRYGAAAL
LLSWLPLIGDLLCLLAGWLRMPWGKVALYLTLGKAARYAVLAWLTLYGMSWWH

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0489 [H]

Homologues:

Organism=Escherichia coli, GI1789045, Length=133, Percent_Identity=55.6390977443609, Blast_Score=143, Evalue=4e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 14302; Mature: 14302

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVSSFTSATLLPGNSEVVLTGLLIAAQAPLLWLMAAAIVGNVLGGLTNVVIGRALPQLT
CCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PQRGLAIALGWMQRYGAAALLLSWLPLIGDLLCLLAGWLRMPWGKVALYLTLGKAARYAV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEHHHHHHHHH
LAWLTLYGMSWWH
HHHHHHHCCCCCC
>Mature Secondary Structure
MFVSSFTSATLLPGNSEVVLTGLLIAAQAPLLWLMAAAIVGNVLGGLTNVVIGRALPQLT
CCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PQRGLAIALGWMQRYGAAALLLSWLPLIGDLLCLLAGWLRMPWGKVALYLTLGKAARYAV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEHHHHHHHHH
LAWLTLYGMSWWH
HHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]