| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is yqaB [H]
Identifier: 238921095
GI number: 238921095
Start: 3106972
End: 3107538
Strand: Reverse
Name: yqaB [H]
Synonym: NT01EI_3231
Alternate gene names: 238921095
Gene position: 3107538-3106972 (Counterclockwise)
Preceding gene: 238921099
Following gene: 238921094
Centisome position: 81.51
GC content: 59.61
Gene sequence:
>567_bases ATGTATGACCGTTATGACGGGCTGATTTTCGATATGGATGGTACCCTGCTCGACAGTGAGCCGACGCATCAGCGGGCGTG GGACGCGGTGCTGGGGCGTTACGGTATGGATTATGACCTAACGGCGGTGATCGCACTCAATGGCTCTCCCACATGGCGTA TTGCTCAGGCTATCATTGAGCACAATCAATCCGATCTCAATCCTCATGCGCTGGCCGCGGAAAAAACGAGGGCAGTAGAG AGTATGCTGTTGGACTGCGTACGTCCGCTGCCGCTGGCGGAGGTTGCCTTGGCCTATATGGGACGTCGTCCCATGGCCGT CGGTACCGGCAGTGAACATCGCCTGGCCGATGCCCTGCTGCGCCATCTGGGGCTGCGCGACTGTTTTCAGGCGATCGTGG CTGCTGATGATGTACAGCGCCATAAGCCGGATCCGCAAACCTTTTTACGCTGTGCTGCGTTGCTCGGCGTTGCGCCGCCC CGCTGCGTGGTGTTTGAGGATGCGGATTTGGGGATTCAGGCCGCCCAGCGAGCGGGGATGGAGTGGATCGACGTGCGCGA CCTGTAA
Upstream 100 bases:
>100_bases CCTGCAGGTATCACGGCGATGCGGCGACGGTCCGCGACAGCTGGCCTGCTTTTACGCTAAAGTAGCTCTCTTTTCCCCGT TTCAGAGGATGAGCATGACG
Downstream 100 bases:
>100_bases TGAGTGAATTTTGGGCTGTCACTGGCATGTTTGTCAGCAGTTTTACCAGCGCGACGCTGCTGCCGGGTAATTCAGAGGTG GTACTGACCGGGCTACTGAT
Product: fructose-1-phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MYDRYDGLIFDMDGTLLDSEPTHQRAWDAVLGRYGMDYDLTAVIALNGSPTWRIAQAIIEHNQSDLNPHALAAEKTRAVE SMLLDCVRPLPLAEVALAYMGRRPMAVGTGSEHRLADALLRHLGLRDCFQAIVAADDVQRHKPDPQTFLRCAALLGVAPP RCVVFEDADLGIQAAQRAGMEWIDVRDL
Sequences:
>Translated_188_residues MYDRYDGLIFDMDGTLLDSEPTHQRAWDAVLGRYGMDYDLTAVIALNGSPTWRIAQAIIEHNQSDLNPHALAAEKTRAVE SMLLDCVRPLPLAEVALAYMGRRPMAVGTGSEHRLADALLRHLGLRDCFQAIVAADDVQRHKPDPQTFLRCAALLGVAPP RCVVFEDADLGIQAAQRAGMEWIDVRDL >Mature_188_residues MYDRYDGLIFDMDGTLLDSEPTHQRAWDAVLGRYGMDYDLTAVIALNGSPTWRIAQAIIEHNQSDLNPHALAAEKTRAVE SMLLDCVRPLPLAEVALAYMGRRPMAVGTGSEHRLADALLRHLGLRDCFQAIVAADDVQRHKPDPQTFLRCAALLGVAPP RCVVFEDADLGIQAAQRAGMEWIDVRDL
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates fructose 1-phosphate and 6-phosphogluconate [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Homo sapiens, GI197382691, Length=187, Percent_Identity=33.1550802139037, Blast_Score=82, Evalue=3e-16, Organism=Homo sapiens, GI207113149, Length=210, Percent_Identity=29.5238095238095, Blast_Score=69, Evalue=2e-12, Organism=Escherichia coli, GI1789046, Length=188, Percent_Identity=69.6808510638298, Blast_Score=268, Evalue=2e-73, Organism=Escherichia coli, GI1787576, Length=191, Percent_Identity=28.7958115183246, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1788021, Length=187, Percent_Identity=33.1550802139037, Blast_Score=71, Evalue=4e-14, Organism=Escherichia coli, GI87082080, Length=189, Percent_Identity=33.3333333333333, Blast_Score=66, Evalue=2e-12, Organism=Drosophila melanogaster, GI17137324, Length=188, Percent_Identity=30.8510638297872, Blast_Score=71, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010976 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 20822; Mature: 20822
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYDRYDGLIFDMDGTLLDSEPTHQRAWDAVLGRYGMDYDLTAVIALNGSPTWRIAQAIIE CCCCCCCEEEECCCCEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHH HNQSDLNPHALAAEKTRAVESMLLDCVRPLPLAEVALAYMGRRPMAVGTGSEHRLADALL CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEECCCCHHHHHHHHH RHLGLRDCFQAIVAADDVQRHKPDPQTFLRCAALLGVAPPRCVVFEDADLGIQAAQRAGM HHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHCCC EWIDVRDL CEEECCCC >Mature Secondary Structure MYDRYDGLIFDMDGTLLDSEPTHQRAWDAVLGRYGMDYDLTAVIALNGSPTWRIAQAIIE CCCCCCCEEEECCCCEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHH HNQSDLNPHALAAEKTRAVESMLLDCVRPLPLAEVALAYMGRRPMAVGTGSEHRLADALL CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEECCCCHHHHHHHHH RHLGLRDCFQAIVAADDVQRHKPDPQTFLRCAALLGVAPPRCVVFEDADLGIQAAQRAGM HHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHCCC EWIDVRDL CEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]