| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is gshA
Identifier: 238921093
GI number: 238921093
Start: 3104923
End: 3106482
Strand: Reverse
Name: gshA
Synonym: NT01EI_3229
Alternate gene names: 238921093
Gene position: 3106482-3104923 (Counterclockwise)
Preceding gene: 238921094
Following gene: 238921092
Centisome position: 81.49
GC content: 59.81
Gene sequence:
>1560_bases TTGATCCCGGACGTATCTCAGGCCCTTAGCTGGCTGGAATCTCATCCGAATGCCCTGGATGGCATCAGGCGCGGTATTGA GCGCGAAACGCTGCGTGTCACTCCCGAGGGGCATTTGGCTACTACGCCGCATCCGGCGGTGTTGGGCAAGGCGTTGACCC ACCCCTGGATTACTACTGACTTCGCCGAAAGCCTGCTGGAGTTTATCACGCCTGTCGATGGCAGCATCGATCATATGCTG ACGTTCCTCAGTGATATTCACCGCTATGTGGCGCGCAATCTCGGCGATGAGCGTATGTGGCCCCTGAGCATGCCCTGTTT TATCGGGAGCGAGCAGGATATCATCCTGGCCCAGTACGGCAGCAGTAACTTGGGGCGCTTTAAAACGCTCTACCGCGAGG GGCTGAAGAATCGTTATGGGGCGCTGATGCAGACCATCTCCGGCGTGCACTATAACTTCTCCCTGCCGCTGTCGTTTTGG CAGGCGCGCGCCGGTGTGCAGGATGCGGATAGCGGTAAGGCTGCCATTTCTGACGGTTATTTCCGCCTGATCCGGAACTA CTATCGCTTTGGCTGGGTGATCCCCTATCTGTTTGGTGCTTCACCGGCTATCTGTAGCTCCTTCCTGAACGGGCGGGAGA GCGCGCTGCCGTTTGAGCGCCGCGGCGGAACGCTGTTCCTGCCCTATGCTACCTCTCTGCGCCTGAGCGATCTGGGATAC ACCAATAAGTCGCAGAGTAATCTTGGGATCACGTTTAATCACCTTAATCAGTATGTCGAAGGGCTGAAACGTGCTATTCA CACCCCCTCCGCTGAGTTTGCCCGCCTGGGCGTGGAGGAAAGCGGCCACTATCACCAGCTGAATGCCAATATTTTGCAGA TCGAGAATGAGCTCTATGCGCCGATCCGACCCAAGCGTGTCACACGTGACGGTGAGTCACCATCTGATGCGCTGCTGCGC GGCGGCGTAGAGTACATTGAGGTTCGCTCTCTGGACATTAACCCGTTCACCCCCATCGGCGTCGATGCCGATCAGGCCCG CTTCCTCGATCTGTTCCTGATCTGGTGCGTGCTGGCCGACGCGCCAGAGATGAGCAGTGACGAGCTGCTGTGTACGCGCC AAAACTGGAACCGGGTGATCCTTGAGGGGCGTAAGCCGGGGCAGACCATCGGCATTGGCTGTCATGATGCCCGTCAGCCG CTGGCGTACGTGGGGCAGTCACTCTTTGCCGACCTGCATCGGGTCGCCGAGGTGCTGGATGGCATTAACGGTGATGCGCG CTACCAGCAGGTCTGCGCTCGCCTGGTCGCGGCCTTCGAGGACGTTTCACTGACTTACTCGGCACGGGTCGTAGCCCAGA TGGGGGAGCGCGGGATCGGCGGTTATGGCCTGACGCTGGCGCAGCATTACCGCGATCGGCTGTGCAGCGAACCGCTTGCG TTGTTGGATGAGACAACGCTGGCGGTACAGGCGCAGCGCTCGGTTACCCGCCAGGCGGCGCTGGAGTCTCAGAGCTGCGA GTCCTTTGCGTCCTACCTCCGGCAGCACGCCGGAGGCTAA
Upstream 100 bases:
>100_bases GCATGGTTGACGCTGTACGGCATGTCGTGGTGGCATTAGGCGTCCATTGCGGTAAGACGCGGTGGGCGCGATTAACTCTT CTTATTAGCGGGAGGTCAAT
Downstream 100 bases:
>100_bases AAAAGAAAAAGGCCACAATATCTGTGGCCAAAATAAGCATCTCTGAGGACAGGGATGATGATAACGAAATATGGAAGACG CGCATGTGTGTCTTTCATAT
Product: glutamate-cysteine ligase
Products: NA
Alternate protein names: Gamma-ECS; GCS; Gamma-glutamylcysteine synthetase
Number of amino acids: Translated: 519; Mature: 519
Protein sequence:
>519_residues MIPDVSQALSWLESHPNALDGIRRGIERETLRVTPEGHLATTPHPAVLGKALTHPWITTDFAESLLEFITPVDGSIDHML TFLSDIHRYVARNLGDERMWPLSMPCFIGSEQDIILAQYGSSNLGRFKTLYREGLKNRYGALMQTISGVHYNFSLPLSFW QARAGVQDADSGKAAISDGYFRLIRNYYRFGWVIPYLFGASPAICSSFLNGRESALPFERRGGTLFLPYATSLRLSDLGY TNKSQSNLGITFNHLNQYVEGLKRAIHTPSAEFARLGVEESGHYHQLNANILQIENELYAPIRPKRVTRDGESPSDALLR GGVEYIEVRSLDINPFTPIGVDADQARFLDLFLIWCVLADAPEMSSDELLCTRQNWNRVILEGRKPGQTIGIGCHDARQP LAYVGQSLFADLHRVAEVLDGINGDARYQQVCARLVAAFEDVSLTYSARVVAQMGERGIGGYGLTLAQHYRDRLCSEPLA LLDETTLAVQAQRSVTRQAALESQSCESFASYLRQHAGG
Sequences:
>Translated_519_residues MIPDVSQALSWLESHPNALDGIRRGIERETLRVTPEGHLATTPHPAVLGKALTHPWITTDFAESLLEFITPVDGSIDHML TFLSDIHRYVARNLGDERMWPLSMPCFIGSEQDIILAQYGSSNLGRFKTLYREGLKNRYGALMQTISGVHYNFSLPLSFW QARAGVQDADSGKAAISDGYFRLIRNYYRFGWVIPYLFGASPAICSSFLNGRESALPFERRGGTLFLPYATSLRLSDLGY TNKSQSNLGITFNHLNQYVEGLKRAIHTPSAEFARLGVEESGHYHQLNANILQIENELYAPIRPKRVTRDGESPSDALLR GGVEYIEVRSLDINPFTPIGVDADQARFLDLFLIWCVLADAPEMSSDELLCTRQNWNRVILEGRKPGQTIGIGCHDARQP LAYVGQSLFADLHRVAEVLDGINGDARYQQVCARLVAAFEDVSLTYSARVVAQMGERGIGGYGLTLAQHYRDRLCSEPLA LLDETTLAVQAQRSVTRQAALESQSCESFASYLRQHAGG >Mature_519_residues MIPDVSQALSWLESHPNALDGIRRGIERETLRVTPEGHLATTPHPAVLGKALTHPWITTDFAESLLEFITPVDGSIDHML TFLSDIHRYVARNLGDERMWPLSMPCFIGSEQDIILAQYGSSNLGRFKTLYREGLKNRYGALMQTISGVHYNFSLPLSFW QARAGVQDADSGKAAISDGYFRLIRNYYRFGWVIPYLFGASPAICSSFLNGRESALPFERRGGTLFLPYATSLRLSDLGY TNKSQSNLGITFNHLNQYVEGLKRAIHTPSAEFARLGVEESGHYHQLNANILQIENELYAPIRPKRVTRDGESPSDALLR GGVEYIEVRSLDINPFTPIGVDADQARFLDLFLIWCVLADAPEMSSDELLCTRQNWNRVILEGRKPGQTIGIGCHDARQP LAYVGQSLFADLHRVAEVLDGINGDARYQQVCARLVAAFEDVSLTYSARVVAQMGERGIGGYGLTLAQHYRDRLCSEPLA LLDETTLAVQAQRSVTRQAALESQSCESFASYLRQHAGG
Specific function: Glutathione biosynthesis; first step. [C]
COG id: COG2918
COG function: function code H; Gamma-glutamylcysteine synthetase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily
Homologues:
Organism=Escherichia coli, GI1789044, Length=518, Percent_Identity=69.4980694980695, Blast_Score=758, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GSH1_EDWI9 (C5BGG7)
Other databases:
- EMBL: CP001600 - RefSeq: YP_002934608.1 - GeneID: 7961065 - GenomeReviews: CP001600_GR - KEGG: eic:NT01EI_3229 - OMA: FGLIRNY - ProtClustDB: CLSK2813583 - HAMAP: MF_00578 - InterPro: IPR007370 - InterPro: IPR006334 - TIGRFAMs: TIGR01434
Pfam domain/function: PF04262 Glu_cys_ligase
EC number: =6.3.2.2
Molecular weight: Translated: 57762; Mature: 57762
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPDVSQALSWLESHPNALDGIRRGIERETLRVTPEGHLATTPHPAVLGKALTHPWITTD CCCCHHHHHHHHHHCCCHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCCCHH FAESLLEFITPVDGSIDHMLTFLSDIHRYVARNLGDERMWPLSMPCFIGSEQDIILAQYG HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCEEEEECC SSNLGRFKTLYREGLKNRYGALMQTISGVHYNFSLPLSFWQARAGVQDADSGKAAISDGY CCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHCCCCCCCCCCHHHHHHH FRLIRNYYRFGWVIPYLFGASPAICSSFLNGRESALPFERRGGTLFLPYATSLRLSDLGY HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHCCCHHHCCCEEEEECCCCEEEHHCCC TNKSQSNLGITFNHLNQYVEGLKRAIHTPSAEFARLGVEESGHYHQLNANILQIENELYA CCCCCCCCCEEHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCEEEECCCEEEECHHHCC PIRPKRVTRDGESPSDALLRGGVEYIEVRSLDINPFTPIGVDADQARFLDLFLIWCVLAD CCCCCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHC APEMSSDELLCTRQNWNRVILEGRKPGQTIGIGCHDARQPLAYVGQSLFADLHRVAEVLD CCCCCCCCEEEECCCCCEEEEECCCCCCEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHC GINGDARYQQVCARLVAAFEDVSLTYSARVVAQMGERGIGGYGLTLAQHYRDRLCSEPLA CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHH LLDETTLAVQAQRSVTRQAALESQSCESFASYLRQHAGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIPDVSQALSWLESHPNALDGIRRGIERETLRVTPEGHLATTPHPAVLGKALTHPWITTD CCCCHHHHHHHHHHCCCHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCCCHH FAESLLEFITPVDGSIDHMLTFLSDIHRYVARNLGDERMWPLSMPCFIGSEQDIILAQYG HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCEEEEECC SSNLGRFKTLYREGLKNRYGALMQTISGVHYNFSLPLSFWQARAGVQDADSGKAAISDGY CCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHCCCCCCCCCCHHHHHHH FRLIRNYYRFGWVIPYLFGASPAICSSFLNGRESALPFERRGGTLFLPYATSLRLSDLGY HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHCCCHHHCCCEEEEECCCCEEEHHCCC TNKSQSNLGITFNHLNQYVEGLKRAIHTPSAEFARLGVEESGHYHQLNANILQIENELYA CCCCCCCCCEEHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCEEEECCCEEEECHHHCC PIRPKRVTRDGESPSDALLRGGVEYIEVRSLDINPFTPIGVDADQARFLDLFLIWCVLAD CCCCCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHC APEMSSDELLCTRQNWNRVILEGRKPGQTIGIGCHDARQPLAYVGQSLFADLHRVAEVLD CCCCCCCCEEEECCCCCEEEEECCCCCCEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHC GINGDARYQQVCARLVAAFEDVSLTYSARVVAQMGERGIGGYGLTLAQHYRDRLCSEPLA CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHH LLDETTLAVQAQRSVTRQAALESQSCESFASYLRQHAGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA