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The map label for this gene is 238921041

Identifier: 238921041

GI number: 238921041

Start: 3053506

End: 3054318

Strand: Reverse

Name: 238921041

Synonym: NT01EI_3171

Alternate gene names: NA

Gene position: 3054318-3053506 (Counterclockwise)

Preceding gene: 238921042

Following gene: 238921040

Centisome position: 80.12

GC content: 59.78

Gene sequence:

>813_bases
GTGACGGCGGCGCAGCGCCAGACACCGGCTGAGCCGCACACGGATGTAGCGGAGCAAGGGATGAAAACGACGACGGCGCT
GATGTGTGCAGGCGTTGCGCTGTTGCTCTTCGGGTGTGCCGATACCCCGGAGGCGCCGGGCATAGCGACCGATACGGTCA
TATTGGCGCCTGAAGCACGGGCGCAGGCTGCGCTCGATCGCGGTGATATGACTCAGGCGCAGCAGGCGTTAGCGCAGCTG
TCCGCCGAGGCGCCCGGTGATTATCGTCGCTCACTGCTGACGGCGCGCTATCAGCAGCTGAGCGGCCAGCCGCAGGCGGC
CGCGCAAAGCTATCGCCAGGCGCTGGCGTTGGCGCCGGACAACGGCACCGTTATGAATAATTACGGTGCGTTTCTCTGCA
GTTTAGGGCAGTATGTAGCGGCGCAACAACAGTTTAACGCGGCAGCGCGTCTGCCGGATGATGGCTGGGTCGCCGAGGCT
TTTTTTAGCGCGGGGATCTGTTTTTTACGTGCTGACCGGCCCGATGACGCTCGCAGGTTATTTGCCCGTGCGTTAAAGGC
CGATCCGCAGCAGGGGACACGTCTGCTGGGCGAGGCCGCACAGACGTTACAACGGGGTGACCGCACGGATGCACGATTGA
TGTTGGATGTTTACAATCATATTTTGCCGGTTTGCGCCGATAGTTTATGGCTACAAATCCGTTTCGCTGCGTTAGATGGG
CGCCAGACGAATCTCCAACGTTATGGCAAGCAACTGGCGCGAAATTTTCCACAATCCCAACAGTACCAGCAGTTCCTAGC
GAATGAATACTGA

Upstream 100 bases:

>100_bases
GGGAGAGGTCATCGACAGAACTAAACGGACCCTGAAGAAGCAAGCGGCAGGGGAACCTATCAACGTGCGTGAAGTCTGAT
GTAGGGACGAACGGCCGCCT

Downstream 100 bases:

>100_bases
AGCCTCCCAAGATCAAGCAGTACCGATGAGCACCGGCGAGCGTCTGCGCCAGGGCCGTGAGCGTTTAGGTCTCACCCAGC
AGCAGGTGGCCGAACGCCTG

Product: type IV pilus biogenesis/stability protein PilW

Products: NA

Alternate protein names: Fimbrial Biogenesis Protein; Tfp Pilus Assembly Protein PilF; Fimbrial Biogenesis And Twitching Motility Protein; Type IV Pilus Assembly Protein PilF; PilF Type IV Pilus Biogenesis/Stability Protein; Type IV Pilus Biogenesis/Stability Protein; Fimbrial Assembly Protein; Type 4 Fimbrial Biogenesis Protein PilF

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MTAAQRQTPAEPHTDVAEQGMKTTTALMCAGVALLLFGCADTPEAPGIATDTVILAPEARAQAALDRGDMTQAQQALAQL
SAEAPGDYRRSLLTARYQQLSGQPQAAAQSYRQALALAPDNGTVMNNYGAFLCSLGQYVAAQQQFNAAARLPDDGWVAEA
FFSAGICFLRADRPDDARRLFARALKADPQQGTRLLGEAAQTLQRGDRTDARLMLDVYNHILPVCADSLWLQIRFAALDG
RQTNLQRYGKQLARNFPQSQQYQQFLANEY

Sequences:

>Translated_270_residues
MTAAQRQTPAEPHTDVAEQGMKTTTALMCAGVALLLFGCADTPEAPGIATDTVILAPEARAQAALDRGDMTQAQQALAQL
SAEAPGDYRRSLLTARYQQLSGQPQAAAQSYRQALALAPDNGTVMNNYGAFLCSLGQYVAAQQQFNAAARLPDDGWVAEA
FFSAGICFLRADRPDDARRLFARALKADPQQGTRLLGEAAQTLQRGDRTDARLMLDVYNHILPVCADSLWLQIRFAALDG
RQTNLQRYGKQLARNFPQSQQYQQFLANEY
>Mature_269_residues
TAAQRQTPAEPHTDVAEQGMKTTTALMCAGVALLLFGCADTPEAPGIATDTVILAPEARAQAALDRGDMTQAQQALAQLS
AEAPGDYRRSLLTARYQQLSGQPQAAAQSYRQALALAPDNGTVMNNYGAFLCSLGQYVAAQQQFNAAARLPDDGWVAEAF
FSAGICFLRADRPDDARRLFARALKADPQQGTRLLGEAAQTLQRGDRTDARLMLDVYNHILPVCADSLWLQIRFAALDGR
QTNLQRYGKQLARNFPQSQQYQQFLANEY

Specific function: Unknown

COG id: COG3063

COG function: function code NU; Tfp pilus assembly protein PilF

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29458; Mature: 29327

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAAQRQTPAEPHTDVAEQGMKTTTALMCAGVALLLFGCADTPEAPGIATDTVILAPEAR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCHH
AQAALDRGDMTQAQQALAQLSAEAPGDYRRSLLTARYQQLSGQPQAAAQSYRQALALAPD
HHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
NGTVMNNYGAFLCSLGQYVAAQQQFNAAARLPDDGWVAEAFFSAGICFLRADRPDDARRL
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEEECCCCHHHHHH
FARALKADPQQGTRLLGEAAQTLQRGDRTDARLMLDVYNHILPVCADSLWLQIRFAALDG
HHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCC
RQTNLQRYGKQLARNFPQSQQYQQFLANEY
CHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
>Mature Secondary Structure 
TAAQRQTPAEPHTDVAEQGMKTTTALMCAGVALLLFGCADTPEAPGIATDTVILAPEAR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCHH
AQAALDRGDMTQAQQALAQLSAEAPGDYRRSLLTARYQQLSGQPQAAAQSYRQALALAPD
HHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
NGTVMNNYGAFLCSLGQYVAAQQQFNAAARLPDDGWVAEAFFSAGICFLRADRPDDARRL
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEEECCCCHHHHHH
FARALKADPQQGTRLLGEAAQTLQRGDRTDARLMLDVYNHILPVCADSLWLQIRFAALDG
HHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCC
RQTNLQRYGKQLARNFPQSQQYQQFLANEY
CHHHHHHHHHHHHHHCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA