Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238920988

Identifier: 238920988

GI number: 238920988

Start: 3005201

End: 3006988

Strand: Reverse

Name: 238920988

Synonym: NT01EI_3118

Alternate gene names: NA

Gene position: 3006988-3005201 (Counterclockwise)

Preceding gene: 238920998

Following gene: 238920987

Centisome position: 78.88

GC content: 56.88

Gene sequence:

>1788_bases
ATGCCGCCAGAAATCGAAAAACATCTGCTTGCCCTTCAGGACGAAGATCCGCGCCGTAAAGCCTGCTACCTATATTGGCA
GGGCTTTCGTATCGTTCGGATCGCCGAACTGCTGGGGGTAAAAGCTACTACGCTGCATAGCTGGAAGCGGCGCGATGGCT
GGGATGATTCAGCCCCGCTGGAGCGGGTGACGGCGGTGACCGAGGCGCGTCTGATCCAGCTCACGATGAAAGAGAATAAG
GAGGGAAAAGACTTTAAGGAGATCGATCTGTTCTGGCGGCAGATGGAGCGCGGGGCAAGGGTTGAGCGCTATCGCCAGGG
CGGCAATGAAGTCGACCTAAATCCGAATCTGGCCAAGCGTAACACCGGGCCACGTAGGTCGCCGGTTACCAACCAGATAA
CAGAAGATCAGGCGGAGAAGCTGAAACAGGTGTTTCTGGAGGGATTATATCCGCACCAGAAACACTGGTATCGCGCCGGG
CTGGAACACCGTATCCGCGATATCAACAAGTCGCGCCAGATTGGGGCGACGATGTTTTTCGCGCAGGAAGGGTTTGTCGA
TGCGGTGGAAACGGGACGCAACCAGATTTTCCTGTCAGCCTCCAAAGCGCAGGCACACCAGTTTCGTCAGTACATTATCG
ATTTTGCCCGCGATGCGGCGGATGTGGAGCTGAAGGGGGAGGTTATTCACCTGCCCCATAACGATGGACGAATGTACTTT
CTCGGCACCAACGCCCGTACCGCGCAGACCTATCACGGCAACCTGTATTTGGACGAATACTTCTGGATATACCGCTTTCT
GGAGCTGCGGCGTAACGCAGCAGGGATGGCCAGCCAGAAGCGCTGGCGGCAGACCTATTTTTCCACGCCCTCCAGCATTA
ACCATGAGGCGTATAAATTCTGGGCGGGATTACTCTTCAATCGGGGCAGGGCGAAGAGCGAACATATTCGACTGGATCTC
AGCCACCGGGCGCTGGCTGCCGGGCGGCTGTGCGAGGACGGGCAGTGGCGGCAGATTGTCACCATTGAAGATGCCATCCG
GCAGGGTTATGACCTGTTCGATATTGACCAGCTCCGGCTGGAATACTCGCCGGAAGAGTTCGCTAACCTGTTTATGTGCC
AGTTTATCGACGATACCGAGTCGGTATTCCCGCTCAGCCTGTTGCAGGGCTGCATGGTGGATAGCTGGGCGGTCTGGGAC
GATTACAAACCGTTCGCCCTGCGTCCCCTCGGCGAACGCTCGGTATGGGTGGGCTACGACCCCGCCTTAACCGGGGACAG
CGCCGGCTGCGTGGTGGTGGCTCCACCTGTAGTGGAGGGGGGTAAGTTCCGGGTGATTGAAAAGCACCAGTGGCACGGCA
TGGATTTTGCGGCGCAGGCGGAGAACATTCGCAAAATTACCGGGCGCTATAACGTGACTTACATCGGCATTGATGTGACC
GGTATCGGCCACGGCGTTCATCAACTGGTGAAACAGTTCTTCCCGGCAGTGCAGGCTTTCTCTTATTCCCCTGAAGTGAA
ACAGCGTCTGGTACTCAAGACGCTGGATGTCGTCCGTAAACATCGGTTGGAGTTCGACGCCGGATGGACGGATTTGGCGC
AGTCGTTTATGGCGATCCGCAAAACCCTGACTCCGTCCGGTCGCCAGGTAACCTTCCAGGCCAGCCGTTCGGAAGAAGTC
TCCCACGCGGATCTGGCATGGGCATGTATGCACGCCATTATCAATGAACCTCTGGAAAGCTCTGGCGGCGCGAACAGCTG
GCGGGGCTTAATTAAGGTGTATGGATGA

Upstream 100 bases:

>100_bases
TCAGGCAACGGGCTTTGCTTGTAGTCACCGGGGTTACAAGTGGTATCGCTACGCGCGAATGGCGGCTGGTTTACGCTGAC
GGCAGAAACGGGAGGACGTT

Downstream 100 bases:

>100_bases
ATAACACTATCGCTTTTACATTCGGTGAACCGGAAGCCCTGTTGGACAGGCGGGAAATACTGAATTATCTGGAGTGCGTG
GACTTTGGCAAATGGTATGC

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Terminase ATPase Subunit; Terminase; Phage-Related Terminase ATPase Subunit; Terminase Related Protein; Bacteriophage Terminase; Orf16-Like Phage Protein; Phage Terminase ATPase Subunit P; Mu-Like Prophage FluMu Protein Gp; Prophage; ATPase Subunit Of Terminase; Phage Gene; Terminase Subunit; Phage P2 Terminase ATPase Subunit GpP-Like Protein; Bacteriophage Terminase Large Subunit; Fels-2 Prophage Protein; Prophage Large Terminase Protein; Phage Terminase Subunit GpP; Terminase Large Subunit; DNA-Dependent ATPase Terminase Subunit; Terminase ATPase Subunit Bacteriophage Origin; Bacteriophage P2 GPP Capsid Protein; Phage Terminase Subunit; Phage-Related Terminase

Number of amino acids: Translated: 595; Mature: 594

Protein sequence:

>595_residues
MPPEIEKHLLALQDEDPRRKACYLYWQGFRIVRIAELLGVKATTLHSWKRRDGWDDSAPLERVTAVTEARLIQLTMKENK
EGKDFKEIDLFWRQMERGARVERYRQGGNEVDLNPNLAKRNTGPRRSPVTNQITEDQAEKLKQVFLEGLYPHQKHWYRAG
LEHRIRDINKSRQIGATMFFAQEGFVDAVETGRNQIFLSASKAQAHQFRQYIIDFARDAADVELKGEVIHLPHNDGRMYF
LGTNARTAQTYHGNLYLDEYFWIYRFLELRRNAAGMASQKRWRQTYFSTPSSINHEAYKFWAGLLFNRGRAKSEHIRLDL
SHRALAAGRLCEDGQWRQIVTIEDAIRQGYDLFDIDQLRLEYSPEEFANLFMCQFIDDTESVFPLSLLQGCMVDSWAVWD
DYKPFALRPLGERSVWVGYDPALTGDSAGCVVVAPPVVEGGKFRVIEKHQWHGMDFAAQAENIRKITGRYNVTYIGIDVT
GIGHGVHQLVKQFFPAVQAFSYSPEVKQRLVLKTLDVVRKHRLEFDAGWTDLAQSFMAIRKTLTPSGRQVTFQASRSEEV
SHADLAWACMHAIINEPLESSGGANSWRGLIKVYG

Sequences:

>Translated_595_residues
MPPEIEKHLLALQDEDPRRKACYLYWQGFRIVRIAELLGVKATTLHSWKRRDGWDDSAPLERVTAVTEARLIQLTMKENK
EGKDFKEIDLFWRQMERGARVERYRQGGNEVDLNPNLAKRNTGPRRSPVTNQITEDQAEKLKQVFLEGLYPHQKHWYRAG
LEHRIRDINKSRQIGATMFFAQEGFVDAVETGRNQIFLSASKAQAHQFRQYIIDFARDAADVELKGEVIHLPHNDGRMYF
LGTNARTAQTYHGNLYLDEYFWIYRFLELRRNAAGMASQKRWRQTYFSTPSSINHEAYKFWAGLLFNRGRAKSEHIRLDL
SHRALAAGRLCEDGQWRQIVTIEDAIRQGYDLFDIDQLRLEYSPEEFANLFMCQFIDDTESVFPLSLLQGCMVDSWAVWD
DYKPFALRPLGERSVWVGYDPALTGDSAGCVVVAPPVVEGGKFRVIEKHQWHGMDFAAQAENIRKITGRYNVTYIGIDVT
GIGHGVHQLVKQFFPAVQAFSYSPEVKQRLVLKTLDVVRKHRLEFDAGWTDLAQSFMAIRKTLTPSGRQVTFQASRSEEV
SHADLAWACMHAIINEPLESSGGANSWRGLIKVYG
>Mature_594_residues
PPEIEKHLLALQDEDPRRKACYLYWQGFRIVRIAELLGVKATTLHSWKRRDGWDDSAPLERVTAVTEARLIQLTMKENKE
GKDFKEIDLFWRQMERGARVERYRQGGNEVDLNPNLAKRNTGPRRSPVTNQITEDQAEKLKQVFLEGLYPHQKHWYRAGL
EHRIRDINKSRQIGATMFFAQEGFVDAVETGRNQIFLSASKAQAHQFRQYIIDFARDAADVELKGEVIHLPHNDGRMYFL
GTNARTAQTYHGNLYLDEYFWIYRFLELRRNAAGMASQKRWRQTYFSTPSSINHEAYKFWAGLLFNRGRAKSEHIRLDLS
HRALAAGRLCEDGQWRQIVTIEDAIRQGYDLFDIDQLRLEYSPEEFANLFMCQFIDDTESVFPLSLLQGCMVDSWAVWDD
YKPFALRPLGERSVWVGYDPALTGDSAGCVVVAPPVVEGGKFRVIEKHQWHGMDFAAQAENIRKITGRYNVTYIGIDVTG
IGHGVHQLVKQFFPAVQAFSYSPEVKQRLVLKTLDVVRKHRLEFDAGWTDLAQSFMAIRKTLTPSGRQVTFQASRSEEVS
HADLAWACMHAIINEPLESSGGANSWRGLIKVYG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68542; Mature: 68410

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPEIEKHLLALQDEDPRRKACYLYWQGFRIVRIAELLGVKATTLHSWKRRDGWDDSAPL
CCCCHHHHHEECCCCCCCCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHH
ERVTAVTEARLIQLTMKENKEGKDFKEIDLFWRQMERGARVERYRQGGNEVDLNPNLAKR
HHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCEECCCCCHHCC
NTGPRRSPVTNQITEDQAEKLKQVFLEGLYPHQKHWYRAGLEHRIRDINKSRQIGATMFF
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHHCCEEEE
AQEGFVDAVETGRNQIFLSASKAQAHQFRQYIIDFARDAADVELKGEVIHLPHNDGRMYF
ECCCCHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCEEECCCEEEECCCCCEEEE
LGTNARTAQTYHGNLYLDEYFWIYRFLELRRNAAGMASQKRWRQTYFSTPSSINHEAYKF
EECCCCEEEEEECCEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHH
WAGLLFNRGRAKSEHIRLDLSHRALAAGRLCEDGQWRQIVTIEDAIRQGYDLFDIDQLRL
HHHHHHCCCCCCCCEEEEEECHHHHHHCCCCCCCCCEEEEEHHHHHHCCCCCCCHHHHHE
EYSPEEFANLFMCQFIDDTESVFPLSLLQGCMVDSWAVWDDYKPFALRPLGERSVWVGYD
ECCHHHHHHHHHHEEECCCCCCCHHHHHHHHHCCCEEECCCCCCCEECCCCCCCEEECCC
PALTGDSAGCVVVAPPVVEGGKFRVIEKHQWHGMDFAAQAENIRKITGRYNVTYIGIDVT
CCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCEEEEEEEEEEE
GIGHGVHQLVKQFFPAVQAFSYSPEVKQRLVLKTLDVVRKHRLEFDAGWTDLAQSFMAIR
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
KTLTPSGRQVTFQASRSEEVSHADLAWACMHAIINEPLESSGGANSWRGLIKVYG
HHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHCCCCCCCCCCEEEECC
>Mature Secondary Structure 
PPEIEKHLLALQDEDPRRKACYLYWQGFRIVRIAELLGVKATTLHSWKRRDGWDDSAPL
CCCHHHHHEECCCCCCCCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHH
ERVTAVTEARLIQLTMKENKEGKDFKEIDLFWRQMERGARVERYRQGGNEVDLNPNLAKR
HHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCEECCCCCHHCC
NTGPRRSPVTNQITEDQAEKLKQVFLEGLYPHQKHWYRAGLEHRIRDINKSRQIGATMFF
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHHCCEEEE
AQEGFVDAVETGRNQIFLSASKAQAHQFRQYIIDFARDAADVELKGEVIHLPHNDGRMYF
ECCCCHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCEEECCCEEEECCCCCEEEE
LGTNARTAQTYHGNLYLDEYFWIYRFLELRRNAAGMASQKRWRQTYFSTPSSINHEAYKF
EECCCCEEEEEECCEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHH
WAGLLFNRGRAKSEHIRLDLSHRALAAGRLCEDGQWRQIVTIEDAIRQGYDLFDIDQLRL
HHHHHHCCCCCCCCEEEEEECHHHHHHCCCCCCCCCEEEEEHHHHHHCCCCCCCHHHHHE
EYSPEEFANLFMCQFIDDTESVFPLSLLQGCMVDSWAVWDDYKPFALRPLGERSVWVGYD
ECCHHHHHHHHHHEEECCCCCCCHHHHHHHHHCCCEEECCCCCCCEECCCCCCCEEECCC
PALTGDSAGCVVVAPPVVEGGKFRVIEKHQWHGMDFAAQAENIRKITGRYNVTYIGIDVT
CCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCEEEEEEEEEEE
GIGHGVHQLVKQFFPAVQAFSYSPEVKQRLVLKTLDVVRKHRLEFDAGWTDLAQSFMAIR
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
KTLTPSGRQVTFQASRSEEVSHADLAWACMHAIINEPLESSGGANSWRGLIKVYG
HHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA