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The map label for this gene is yiaG [C]

Identifier: 238920998

GI number: 238920998

Start: 3012995

End: 3013291

Strand: Reverse

Name: yiaG [C]

Synonym: NT01EI_3128

Alternate gene names: 238920998

Gene position: 3013291-3012995 (Counterclockwise)

Preceding gene: 238920999

Following gene: 238920988

Centisome position: 79.04

GC content: 50.51

Gene sequence:

>297_bases
ATGAAAGACGAATTATTTGCCGATCTACTGGCCAGTGCAGAAGAAATGGTAAGAATTGAAAAGGGCGAACAGACACCGGA
GCCGGAGCATGTTCATACGTTTAGCCCGATTGACGTTAAAGCGATCCGCGAGGCGACCGGGTTAAAACAGCAGGATTTTG
CGGTGGCCGTTGGCGTCAGCTATGACCTTGTAAAAAGCTGGGAAACAAAACGGCGTCAGCCGACCGGCGCGCCACGCAAG
CTGCTGCTGCTGCTGCAGACCAATCCTTTTATTATCAACCAGCTTAAAGCTATTTAG

Upstream 100 bases:

>100_bases
GCAGTTATCCGATATGCTGGTGTAACGCTGAGGTTCTGTAACTCCCATATGGGCGAAGTATAAGGCCCGATGCGGCGTTA
ACGAGGGCGATGAGGTACAG

Downstream 100 bases:

>100_bases
TTCCGTGATGCGCCTGTCTGGGGCGCATCAACTTTGTAGGTGGTTGATCACTAAATCTTCTATTTTCCGCACATCTTCCG
CTGAAAACCCCAGCAACTGC

Product: hypothetical protein

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Helix-Turn-Helix Containing Protein; Transcriptional Regulator XRE Family; Transcriptional Regulator HTH_3 Domain Protein; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Family Protein; HTH-Type Transcriptional Regulator YiaG

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MKDELFADLLASAEEMVRIEKGEQTPEPEHVHTFSPIDVKAIREATGLKQQDFAVAVGVSYDLVKSWETKRRQPTGAPRK
LLLLLQTNPFIINQLKAI

Sequences:

>Translated_98_residues
MKDELFADLLASAEEMVRIEKGEQTPEPEHVHTFSPIDVKAIREATGLKQQDFAVAVGVSYDLVKSWETKRRQPTGAPRK
LLLLLQTNPFIINQLKAI
>Mature_98_residues
MKDELFADLLASAEEMVRIEKGEQTPEPEHVHTFSPIDVKAIREATGLKQQDFAVAVGVSYDLVKSWETKRRQPTGAPRK
LLLLLQTNPFIINQLKAI

Specific function: Unknown

COG id: COG2944

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789978, Length=89, Percent_Identity=39.3258426966292, Blast_Score=61, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11057; Mature: 11057

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDELFADLLASAEEMVRIEKGEQTPEPEHVHTFSPIDVKAIREATGLKQQDFAVAVGVS
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCHHHHHHHHCCCCCCEEEEECCC
YDLVKSWETKRRQPTGAPRKLLLLLQTNPFIINQLKAI
HHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHCC
>Mature Secondary Structure
MKDELFADLLASAEEMVRIEKGEQTPEPEHVHTFSPIDVKAIREATGLKQQDFAVAVGVS
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCHHHHHHHHCCCCCCEEEEECCC
YDLVKSWETKRRQPTGAPRKLLLLLQTNPFIINQLKAI
HHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA