| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is aroG [H]
Identifier: 238920734
GI number: 238920734
Start: 2739572
End: 2740636
Strand: Reverse
Name: aroG [H]
Synonym: NT01EI_2847
Alternate gene names: 238920734
Gene position: 2740636-2739572 (Counterclockwise)
Preceding gene: 238920736
Following gene: 238920732
Centisome position: 71.89
GC content: 59.81
Gene sequence:
>1065_bases ATGAGCTATCAGAACGACGATTTACGTATTAAACAGATCAAGGAACTGCTGCCTCCGGTGGCGCTGCTGGAAGCCTTTCC AGCTACCGCCTGTGCGGCCAGCACGGTGTCGCAGACCCGTAGCGCCATTCACCGTATCCTACAGGGAGAGGATGATCGCC TGCTGGTGATCATTGGTCCCTGTTCCATCCATGATCCGCAGGCGGCGCAGGAGTATGCCTCCCGTTTGCTGGCGCTGCGC AGTGCGTTGGCCGGTGAGTTGGAGATTGTAATGCGGGTTTACTTTGAGAAACCACGTACCACCGTGGGTTGGAAGGGGCT GATCAACGATCCACATATGGATGGCAGCTACTGTATCAACGACGGCCTGCGTAGTGCCCGCCGTCTGCTGCTGGAGATCA ACGATAGCGGGATGCCAACTGCCGGGGAGTTTCTCGATATGATTACCCCGCAGTATCTGGCCGATCTGATGAGCTGGGGC GCCATCGGGGCCCGAACTACCGAGTCGCAGGTGCACCGTGAACTGGCCTCGGGGCTCTCTTGCCCCGTCGGCTTTAAAAA CGGCACCGATGGTACCATCAAGGTCGCCATCGATGCCATCAACGCGGCCGGGGCACCACATTGCTTCCTGTCGGTGACCA AGTGGGGGCACTCGGCCATCGTCAATACCAGCGGTAACGGTGACTGCCATATCATTCTGCGCGGTGGCAAGGCTCCCAAC TACAGCGCCGCCGACGTACAGATGGTGACGGCGGGTTTACGTCAGGCCGGTTTACCGCCTCAGGTAATGATCGACTTCAG CCATGCGAATAGCAGCAAGCAGTTCAAGCGTCAGATGGTGGTATGCGGGGATGTCTGTGCCCAGATGGCCGCCGGTGAGC AGGCTATTATGGGGGTGATGATCGAAAGCCATCTGGTGGAGGGAAATCAGAGCCCGGATGGCAGCGAGACGCTGCGTTAT GGACAGAGCGTCACTGATGCCTGCATCGGCTGGGAGGACAGCGAGCGGGCCCTGCATCAGCTGGCCGACGCGGTACGCGC GCGCCGGACACGGCTAACCGCCTAG
Upstream 100 bases:
>100_bases AAAACTAGGCGATAGAGCTCACCGTTTACAACGGCGTGAGAAAGCGGATAGATTGAAAAGTATCGCAATACGCCTTTTCT ACGACACGAATGGATGCACT
Downstream 100 bases:
>100_bases GTGCGCTGGCCGCCACGGAGCCCGGCGCCGTGGCGGAGTTAAGAAGGCGGGCTAGGTTAGCCTGCCTTGCCCTGATTGGC GACGGCGCTTTGGCGGGCGG
Product: phospho-2-dehydro-3-deoxyheptonate aldolase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MSYQNDDLRIKQIKELLPPVALLEAFPATACAASTVSQTRSAIHRILQGEDDRLLVIIGPCSIHDPQAAQEYASRLLALR SALAGELEIVMRVYFEKPRTTVGWKGLINDPHMDGSYCINDGLRSARRLLLEINDSGMPTAGEFLDMITPQYLADLMSWG AIGARTTESQVHRELASGLSCPVGFKNGTDGTIKVAIDAINAAGAPHCFLSVTKWGHSAIVNTSGNGDCHIILRGGKAPN YSAADVQMVTAGLRQAGLPPQVMIDFSHANSSKQFKRQMVVCGDVCAQMAAGEQAIMGVMIESHLVEGNQSPDGSETLRY GQSVTDACIGWEDSERALHQLADAVRARRTRLTA
Sequences:
>Translated_354_residues MSYQNDDLRIKQIKELLPPVALLEAFPATACAASTVSQTRSAIHRILQGEDDRLLVIIGPCSIHDPQAAQEYASRLLALR SALAGELEIVMRVYFEKPRTTVGWKGLINDPHMDGSYCINDGLRSARRLLLEINDSGMPTAGEFLDMITPQYLADLMSWG AIGARTTESQVHRELASGLSCPVGFKNGTDGTIKVAIDAINAAGAPHCFLSVTKWGHSAIVNTSGNGDCHIILRGGKAPN YSAADVQMVTAGLRQAGLPPQVMIDFSHANSSKQFKRQMVVCGDVCAQMAAGEQAIMGVMIESHLVEGNQSPDGSETLRY GQSVTDACIGWEDSERALHQLADAVRARRTRLTA >Mature_353_residues SYQNDDLRIKQIKELLPPVALLEAFPATACAASTVSQTRSAIHRILQGEDDRLLVIIGPCSIHDPQAAQEYASRLLALRS ALAGELEIVMRVYFEKPRTTVGWKGLINDPHMDGSYCINDGLRSARRLLLEINDSGMPTAGEFLDMITPQYLADLMSWGA IGARTTESQVHRELASGLSCPVGFKNGTDGTIKVAIDAINAAGAPHCFLSVTKWGHSAIVNTSGNGDCHIILRGGKAPNY SAADVQMVTAGLRQAGLPPQVMIDFSHANSSKQFKRQMVVCGDVCAQMAAGEQAIMGVMIESHLVEGNQSPDGSETLRYG QSVTDACIGWEDSERALHQLADAVRARRTRLTA
Specific function: Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: COG0722
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786969, Length=349, Percent_Identity=81.9484240687679, Blast_Score=605, Evalue=1e-174, Organism=Escherichia coli, GI1787996, Length=345, Percent_Identity=57.3913043478261, Blast_Score=412, Evalue=1e-116, Organism=Escherichia coli, GI1788953, Length=339, Percent_Identity=53.6873156342183, Blast_Score=372, Evalue=1e-104, Organism=Saccharomyces cerevisiae, GI6319726, Length=347, Percent_Identity=55.9077809798271, Blast_Score=370, Evalue=1e-103, Organism=Saccharomyces cerevisiae, GI6320240, Length=355, Percent_Identity=52.6760563380282, Blast_Score=362, Evalue=1e-101,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006219 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 38173; Mature: 38042
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYQNDDLRIKQIKELLPPVALLEAFPATACAASTVSQTRSAIHRILQGEDDRLLVIIGP CCCCCCCHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC CSIHDPQAAQEYASRLLALRSALAGELEIVMRVYFEKPRTTVGWKGLINDPHMDGSYCIN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH DGLRSARRLLLEINDSGMPTAGEFLDMITPQYLADLMSWGAIGARTTESQVHRELASGLS HHHHHHHHEEEEECCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC CPVGFKNGTDGTIKVAIDAINAAGAPHCFLSVTKWGHSAIVNTSGNGDCHIILRGGKAPN CCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCEEEEECCCCCCEEEEEECCCCCC YSAADVQMVTAGLRQAGLPPQVMIDFSHANSSKQFKRQMVVCGDVCAQMAAGEQAIMGVM CCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH IESHLVEGNQSPDGSETLRYGQSVTDACIGWEDSERALHQLADAVRARRTRLTA HHHHHHCCCCCCCHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SYQNDDLRIKQIKELLPPVALLEAFPATACAASTVSQTRSAIHRILQGEDDRLLVIIGP CCCCCCHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC CSIHDPQAAQEYASRLLALRSALAGELEIVMRVYFEKPRTTVGWKGLINDPHMDGSYCIN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH DGLRSARRLLLEINDSGMPTAGEFLDMITPQYLADLMSWGAIGARTTESQVHRELASGLS HHHHHHHHEEEEECCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC CPVGFKNGTDGTIKVAIDAINAAGAPHCFLSVTKWGHSAIVNTSGNGDCHIILRGGKAPN CCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCEEEEECCCCCCEEEEEECCCCCC YSAADVQMVTAGLRQAGLPPQVMIDFSHANSSKQFKRQMVVCGDVCAQMAAGEQAIMGVM CCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH IESHLVEGNQSPDGSETLRYGQSVTDACIGWEDSERALHQLADAVRARRTRLTA HHHHHHCCCCCCCHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]