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The map label for this gene is ybgF [H]

Identifier: 238920736

GI number: 238920736

Start: 2743570

End: 2744328

Strand: Reverse

Name: ybgF [H]

Synonym: NT01EI_2855

Alternate gene names: 238920736

Gene position: 2744328-2743570 (Counterclockwise)

Preceding gene: 238920737

Following gene: 238920734

Centisome position: 71.99

GC content: 56.52

Gene sequence:

>759_bases
ATGGGTCTGTCGTTACTGGTTGGCGTAGCGGCCCCCTGGGTCGCTACTGCCCAAGCGCCAATCAGTAGCGTCGGCTCCGG
CTCGGTGGAAGACCGGGTGACCTCCCTTGAGCGTATTACCAACGCTCAGGGCCAGCTGTTGACCCAGCTTCAGCAACAGC
TTTCCGATAACCAGCGTGATATTGACACTCTGCGCGGGCAGATCCAGGAAAACCAATATCAACTGAATCAGATCGAGGAA
CGTCAGAAACAGATCTATCAGCAGATGGACAGTTTGAGCAGCGGCAGTGCCCCCCAGGGTGCGTCAGCGTCATCGTCGGC
AGCGACATCCGACCCACAGGTGGCGGAGGCCAATCCCCCGGCGGCAGCCCAGCAGGCGGCCGCCAGCGGCGGTGATGCCA
ACGTGGACTATAACCGCGCCGTCGATCTGGTTCTGGTGAAGAAGCAGAATGATCAGGCAATCTCGGCTTTTCAGACCTTT
ATCAAACAGTATCCGGACTCTACCTATCAACCCAACGCCAATTATTGGCTGGGGCAGCTGTTTTACAGCAAGGGGAAAAA
GGACGATGCGGCCTATTATTATGCCGTGGTGGTAAAAAACTACCCCAAATCGCCCAAGGCCGCGGAGTCCATGTATAAGG
TCGGTGTGATCATGCAGGAGAAAGGGCAGGCCGATAAGGCCAACGCCGTCTACCAGCAGGTGATCAAACAATATCCGAAC
AGCGATGCGGCCAAGCTGGCGCAAAAACGCATGGGATAA

Upstream 100 bases:

>100_bases
CGATGAAGCGGCATACGCGAAAAACCGTCGTGCCGTACTGGTCTATTAATTCTGTTACCTAGACGAGTAGCGAATGAGCA
GTAACTTCAGGCGTCATATG

Downstream 100 bases:

>100_bases
CCCTGAACGGGCCGGAAATCAGGCGTATTGCCTGTTTTCCGGCCCCGTGTGTATGAAGCGCAACCAATTGACTGGATTCT
GAGAATTTTTGGTTGCGCTG

Product: tol-pal system protein YbgF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MGLSLLVGVAAPWVATAQAPISSVGSGSVEDRVTSLERITNAQGQLLTQLQQQLSDNQRDIDTLRGQIQENQYQLNQIEE
RQKQIYQQMDSLSSGSAPQGASASSSAATSDPQVAEANPPAAAQQAAASGGDANVDYNRAVDLVLVKKQNDQAISAFQTF
IKQYPDSTYQPNANYWLGQLFYSKGKKDDAAYYYAVVVKNYPKSPKAAESMYKVGVIMQEKGQADKANAVYQQVIKQYPN
SDAAKLAQKRMG

Sequences:

>Translated_252_residues
MGLSLLVGVAAPWVATAQAPISSVGSGSVEDRVTSLERITNAQGQLLTQLQQQLSDNQRDIDTLRGQIQENQYQLNQIEE
RQKQIYQQMDSLSSGSAPQGASASSSAATSDPQVAEANPPAAAQQAAASGGDANVDYNRAVDLVLVKKQNDQAISAFQTF
IKQYPDSTYQPNANYWLGQLFYSKGKKDDAAYYYAVVVKNYPKSPKAAESMYKVGVIMQEKGQADKANAVYQQVIKQYPN
SDAAKLAQKRMG
>Mature_251_residues
GLSLLVGVAAPWVATAQAPISSVGSGSVEDRVTSLERITNAQGQLLTQLQQQLSDNQRDIDTLRGQIQENQYQLNQIEER
QKQIYQQMDSLSSGSAPQGASASSSAATSDPQVAEANPPAAAQQAAASGGDANVDYNRAVDLVLVKKQNDQAISAFQTFI
KQYPDSTYQPNANYWLGQLFYSKGKKDDAAYYYAVVVKNYPKSPKAAESMYKVGVIMQEKGQADKANAVYQQVIKQYPNS
DAAKLAQKRMG

Specific function: Unknown

COG id: COG1729

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786963, Length=258, Percent_Identity=67.4418604651163, Blast_Score=296, Evalue=1e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014162
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27338; Mature: 27206

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLSLLVGVAAPWVATAQAPISSVGSGSVEDRVTSLERITNAQGQLLTQLQQQLSDNQRD
CCHHHHHHHHCCHHHHHHCCHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHH
IDTLRGQIQENQYQLNQIEERQKQIYQQMDSLSSGSAPQGASASSSAATSDPQVAEANPP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AAAQQAAASGGDANVDYNRAVDLVLVKKQNDQAISAFQTFIKQYPDSTYQPNANYWLGQL
HHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
FYSKGKKDDAAYYYAVVVKNYPKSPKAAESMYKVGVIMQEKGQADKANAVYQQVIKQYPN
HHHCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
SDAAKLAQKRMG
CHHHHHHHHHCC
>Mature Secondary Structure 
GLSLLVGVAAPWVATAQAPISSVGSGSVEDRVTSLERITNAQGQLLTQLQQQLSDNQRD
CHHHHHHHHCCHHHHHHCCHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHH
IDTLRGQIQENQYQLNQIEERQKQIYQQMDSLSSGSAPQGASASSSAATSDPQVAEANPP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AAAQQAAASGGDANVDYNRAVDLVLVKKQNDQAISAFQTFIKQYPDSTYQPNANYWLGQL
HHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
FYSKGKKDDAAYYYAVVVKNYPKSPKAAESMYKVGVIMQEKGQADKANAVYQQVIKQYPN
HHHCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
SDAAKLAQKRMG
CHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1574003; 8905232; 9278503; 7567469 [H]