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The map label for this gene is ccmC [H]

Identifier: 238920655

GI number: 238920655

Start: 2665079

End: 2665804

Strand: Reverse

Name: ccmC [H]

Synonym: NT01EI_2767

Alternate gene names: 238920655

Gene position: 2665804-2665079 (Counterclockwise)

Preceding gene: 238920656

Following gene: 238920654

Centisome position: 69.93

GC content: 61.71

Gene sequence:

>726_bases
ATGCCGGAACGGCTCTATCGGCTGTGCGGCAGACTGACCCCCTGGCTGGGGGGGCTTGGTATCCTGTTTCTTCTGGCCGG
CCTGATCTGGGGATTCGGCTTTGCACCGGCCGACTATCAGCAGGGCAACAGCTACCGCATTATGTATCTGCACGTTCCCG
CAGCTATCTGGTCGATGGGGATCTACGCCGGCATGGCCGTGGCAGCCTTTGTCGGGCTGGTCTGGCAGATGAAGATGGCG
GATTTGGTCGGTGCGGCCATGGCACCGGTCGGCGCGGTGTTTACCTTTATTGCGTTGGCGACCGGCTCGGCCTGGGGTAA
GCCAATGTGGGGCACCTGGTGGGTGTGGGATGCCCGTCTGACCTCCGAGCTGGTGCTGCTGTTTCTCTACCTGGGGGTTA
TCGCCCTGTATAACGCCTTTGAGGATCGACGTCTCGCCGGGCGGGCCGCGGGCATTCTGGTGCTGGTCGGGGTGGTCAAC
CTGCCGATCATCCACTTTTCCGTAGAGTGGTGGAACACGCTGCACCAGGGATCCAGCAATATGCAGCAGAGCATCGATCC
CAGCATGCGTGCCCCGCTGCGGCTGAGTATCTTTGGTTTCCTGTTTTTCTTTGCCACGCTGACGCTGATGCGCCTGCGTA
ACCTTATTCTGCAGCAGGAGCGGCACCGCCCCTGGGTCGCCGCATTGCTGTCGTCGTCGGTTTCTCCAGGGAGGCGCCCG
CAATGA

Upstream 100 bases:

>100_bases
TGCTGAATTTGAATGAGTTTTCATCATTCCGGGCTTCAGCCCGGACCATTCATTACAATTGTGAGCAATCGCTATGTGGA
AATGGCTTCATCAGCTTGCC

Downstream 100 bases:

>100_bases
CACCGTTCTTTGTTTCCTGGCAGGCGTTTTTTGCGATGGGCGGCTATGCCTTCTATGTCTGGCTGTCGGTTGCACTGACG
CTGCTGCCGTTGCTGGGGGT

Product: heme exporter protein CcmC

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CcmC [H]

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MPERLYRLCGRLTPWLGGLGILFLLAGLIWGFGFAPADYQQGNSYRIMYLHVPAAIWSMGIYAGMAVAAFVGLVWQMKMA
DLVGAAMAPVGAVFTFIALATGSAWGKPMWGTWWVWDARLTSELVLLFLYLGVIALYNAFEDRRLAGRAAGILVLVGVVN
LPIIHFSVEWWNTLHQGSSNMQQSIDPSMRAPLRLSIFGFLFFFATLTLMRLRNLILQQERHRPWVAALLSSSVSPGRRP
Q

Sequences:

>Translated_241_residues
MPERLYRLCGRLTPWLGGLGILFLLAGLIWGFGFAPADYQQGNSYRIMYLHVPAAIWSMGIYAGMAVAAFVGLVWQMKMA
DLVGAAMAPVGAVFTFIALATGSAWGKPMWGTWWVWDARLTSELVLLFLYLGVIALYNAFEDRRLAGRAAGILVLVGVVN
LPIIHFSVEWWNTLHQGSSNMQQSIDPSMRAPLRLSIFGFLFFFATLTLMRLRNLILQQERHRPWVAALLSSSVSPGRRP
Q
>Mature_240_residues
PERLYRLCGRLTPWLGGLGILFLLAGLIWGFGFAPADYQQGNSYRIMYLHVPAAIWSMGIYAGMAVAAFVGLVWQMKMAD
LVGAAMAPVGAVFTFIALATGSAWGKPMWGTWWVWDARLTSELVLLFLYLGVIALYNAFEDRRLAGRAAGILVLVGVVNL
PIIHFSVEWWNTLHQGSSNMQQSIDPSMRAPLRLSIFGFLFFFATLTLMRLRNLILQQERHRPWVAALLSSSVSPGRRPQ

Specific function: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmC/CycZ/HelC family [H]

Homologues:

Organism=Escherichia coli, GI1788527, Length=230, Percent_Identity=79.5652173913043, Blast_Score=377, Evalue=1e-106,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR003557 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 26906; Mature: 26775

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPERLYRLCGRLTPWLGGLGILFLLAGLIWGFGFAPADYQQGNSYRIMYLHVPAAIWSMG
CCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEHHHHHHHHH
IYAGMAVAAFVGLVWQMKMADLVGAAMAPVGAVFTFIALATGSAWGKPMWGTWWVWDARL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHH
TSELVLLFLYLGVIALYNAFEDRRLAGRAAGILVLVGVVNLPIIHFSVEWWNTLHQGSSN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHCCCHH
MQQSIDPSMRAPLRLSIFGFLFFFATLTLMRLRNLILQQERHRPWVAALLSSSVSPGRRP
HHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCC
Q
C
>Mature Secondary Structure 
PERLYRLCGRLTPWLGGLGILFLLAGLIWGFGFAPADYQQGNSYRIMYLHVPAAIWSMG
CHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEHHHHHHHHH
IYAGMAVAAFVGLVWQMKMADLVGAAMAPVGAVFTFIALATGSAWGKPMWGTWWVWDARL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHH
TSELVLLFLYLGVIALYNAFEDRRLAGRAAGILVLVGVVNLPIIHFSVEWWNTLHQGSSN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHCCCHH
MQQSIDPSMRAPLRLSIFGFLFFFATLTLMRLRNLILQQERHRPWVAALLSSSVSPGRRP
HHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]