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The map label for this gene is 238920637

Identifier: 238920637

GI number: 238920637

Start: 2645916

End: 2647304

Strand: Direct

Name: 238920637

Synonym: NT01EI_2749

Alternate gene names: NA

Gene position: 2645916-2647304 (Clockwise)

Preceding gene: 238920636

Following gene: 238920638

Centisome position: 69.4

GC content: 55.58

Gene sequence:

>1389_bases
ATGAAAATTCACAAACCAATTTATTGGCATCAGGGCATGTTTTTACAGCCGCAGCATTTTCAGCTGGCAGACCTGCATAC
TCAGTTTCAGATCAAGCCATTCCTGAATTCCGGACTGCAAGATTTTTGGGGAGTGGGAGCGCTGACCATTTCAGAGTCAG
CCCTGGGTAACCAGCTGCTTAATATCCTGTCGGCTGAGCTGATCTTCCAGGATCAAAGCTATGTCATATGGCCGGGTAAC
ACCATCCTTAAGCCACGATCCTTCGCCTCTGCCTGGCTGGATCAGAGCCGACCGTTCAATGTCTACCTGGGGCTAAAAAA
GCAGGACACAATAGAGTCCAATGTGGCCGTCGTGCCACAGCTTGAGGATGGCGCAGACCGGAATGTCCGTTGCGTGACGA
CCCAACAGGGAAACAAGCACGCTGATTTATATTCGGATGGGCCCGAAGCCGAGATCCAGAGCCTGCACTACGTACTGCAG
GTGCTGTGGGAAAATGAGGTTGAACAGCTGACGGATTACAATATCCTGCCAATCGCCCGGTTGGAGCGTAAGGGAGAGCT
GATTCAGCAGTCCAGACACTTCATTCCGCCGTGTTACATCATGGGTGGCTCCGAGCCCCTGATGCGGGTGGTACGGGATG
TACGGGACGATCTGGCAGGACGCGCCCGCCAGCTGGAGGCCTATAAAAGTCCGCGCGAAATCCGCAAGGCGGAGTTTGAT
GCCAGCTTTCTGATGTTTCTGCTGGCCCTGCGCACCCTCAACCGCTATGTACCGCTGCTGTATCAGCTGACCGAATCACC
GTTGGTCCATCCGCGCAAAGTCTACGACGTACTGCGGCAGATCGTCGGCGAGCTGTCCACCTTCAGCGAGAACTGCGACA
TGCTGGGATCCACGGATGAAAACAGCCCGGGGCTCCCACCCTACCGCCATCAGGATCTCGCTCCGGGTCTCTTAACGGTA
CGCGATCTGATTATTCGGCTATTGAATGAAATATCGATCGGACCTGATTTCCTGATCACCCTTGAGCCAAGCGGAGAGTA
TCTGACGGCACAGCTACCCAATAGTCTGCTGGAGGAGCGTAACCGTTTCTACCTGATCGTCCGCAGCGACATGGCACCGG
ATACCCTGCAGGACTCGTTCCGGGCCAGGGCCAGACTGGCCGAGGCCAGCGCAATGCCCTTACTGATCCAGCGAGCCTTA
CCGGGGATCACGCTGACGCCGCTATCGTCAGTTCCCGAGGGCTTGCCCCGGCGATCCTGCTCATTTTATTTCAAGATCGA
CTCCCAGAGTGAAGCCTGGCGGCAGGCCGCCCAGAGTTGCCATATTGCATTCAGCTGGTTCGATGCCCCAGATGACGTCA
AAGTAGAATTGGTAGGAGTGAACCGGTGA

Upstream 100 bases:

>100_bases
ATAGGCTCAGGCCGACGGATCGCCTGTTATAAATAACAGATGACACATGCAGTTAGAGAAAAACTGCGCCGACTCTCCAT
ACTTGCCTTTAGGGTGATAG

Downstream 100 bases:

>100_bases
GTTTATCGGAAGCATTTATTCAGCCCATGCTCTATGTGCGGCAATTTCTACAGGCGCCCGAAGGGGATGCATCATTATTT
CGTGAACGGCTGCGATCATA

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Protein ImpJ/VasE; Conserved Protein; Replication/Virulence Associated Protein; Type VI Secretion System Protein EvpM; Type VI Secretion System Protein; Type VI Secretion System Protein ImpJ; Type VI Secretion System Core Protein; T6ss M; Temperature-Dependent Protein Secretion ImpJ

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MKIHKPIYWHQGMFLQPQHFQLADLHTQFQIKPFLNSGLQDFWGVGALTISESALGNQLLNILSAELIFQDQSYVIWPGN
TILKPRSFASAWLDQSRPFNVYLGLKKQDTIESNVAVVPQLEDGADRNVRCVTTQQGNKHADLYSDGPEAEIQSLHYVLQ
VLWENEVEQLTDYNILPIARLERKGELIQQSRHFIPPCYIMGGSEPLMRVVRDVRDDLAGRARQLEAYKSPREIRKAEFD
ASFLMFLLALRTLNRYVPLLYQLTESPLVHPRKVYDVLRQIVGELSTFSENCDMLGSTDENSPGLPPYRHQDLAPGLLTV
RDLIIRLLNEISIGPDFLITLEPSGEYLTAQLPNSLLEERNRFYLIVRSDMAPDTLQDSFRARARLAEASAMPLLIQRAL
PGITLTPLSSVPEGLPRRSCSFYFKIDSQSEAWRQAAQSCHIAFSWFDAPDDVKVELVGVNR

Sequences:

>Translated_462_residues
MKIHKPIYWHQGMFLQPQHFQLADLHTQFQIKPFLNSGLQDFWGVGALTISESALGNQLLNILSAELIFQDQSYVIWPGN
TILKPRSFASAWLDQSRPFNVYLGLKKQDTIESNVAVVPQLEDGADRNVRCVTTQQGNKHADLYSDGPEAEIQSLHYVLQ
VLWENEVEQLTDYNILPIARLERKGELIQQSRHFIPPCYIMGGSEPLMRVVRDVRDDLAGRARQLEAYKSPREIRKAEFD
ASFLMFLLALRTLNRYVPLLYQLTESPLVHPRKVYDVLRQIVGELSTFSENCDMLGSTDENSPGLPPYRHQDLAPGLLTV
RDLIIRLLNEISIGPDFLITLEPSGEYLTAQLPNSLLEERNRFYLIVRSDMAPDTLQDSFRARARLAEASAMPLLIQRAL
PGITLTPLSSVPEGLPRRSCSFYFKIDSQSEAWRQAAQSCHIAFSWFDAPDDVKVELVGVNR
>Mature_462_residues
MKIHKPIYWHQGMFLQPQHFQLADLHTQFQIKPFLNSGLQDFWGVGALTISESALGNQLLNILSAELIFQDQSYVIWPGN
TILKPRSFASAWLDQSRPFNVYLGLKKQDTIESNVAVVPQLEDGADRNVRCVTTQQGNKHADLYSDGPEAEIQSLHYVLQ
VLWENEVEQLTDYNILPIARLERKGELIQQSRHFIPPCYIMGGSEPLMRVVRDVRDDLAGRARQLEAYKSPREIRKAEFD
ASFLMFLLALRTLNRYVPLLYQLTESPLVHPRKVYDVLRQIVGELSTFSENCDMLGSTDENSPGLPPYRHQDLAPGLLTV
RDLIIRLLNEISIGPDFLITLEPSGEYLTAQLPNSLLEERNRFYLIVRSDMAPDTLQDSFRARARLAEASAMPLLIQRAL
PGITLTPLSSVPEGLPRRSCSFYFKIDSQSEAWRQAAQSCHIAFSWFDAPDDVKVELVGVNR

Specific function: Unknown

COG id: COG3522

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52578; Mature: 52578

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIHKPIYWHQGMFLQPQHFQLADLHTQFQIKPFLNSGLQDFWGVGALTISESALGNQLL
CCCCCCEEECCCEEECCCCCCCCCCCCEEEEEHHHHCCHHHHHCCCEEEECHHHHHHHHH
NILSAELIFQDQSYVIWPGNTILKPRSFASAWLDQSRPFNVYLGLKKQDTIESNVAVVPQ
HHHHHHHEEECCCEEEECCCCEECCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEE
LEDGADRNVRCVTTQQGNKHADLYSDGPEAEIQSLHYVLQVLWENEVEQLTDYNILPIAR
CCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LERKGELIQQSRHFIPPCYIMGGSEPLMRVVRDVRDDLAGRARQLEAYKSPREIRKAEFD
HHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
ASFLMFLLALRTLNRYVPLLYQLTESPLVHPRKVYDVLRQIVGELSTFSENCDMLGSTDE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
NSPGLPPYRHQDLAPGLLTVRDLIIRLLNEISIGPDFLITLEPSGEYLTAQLPNSLLEER
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEHHCCHHHHHCC
NRFYLIVRSDMAPDTLQDSFRARARLAEASAMPLLIQRALPGITLTPLSSVPEGLPRRSC
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCEECCCHHCCCCCCCCCC
SFYFKIDSQSEAWRQAAQSCHIAFSWFDAPDDVKVELVGVNR
EEEEEECCCHHHHHHHHHCCEEEEEEECCCCCCEEEEEECCC
>Mature Secondary Structure
MKIHKPIYWHQGMFLQPQHFQLADLHTQFQIKPFLNSGLQDFWGVGALTISESALGNQLL
CCCCCCEEECCCEEECCCCCCCCCCCCEEEEEHHHHCCHHHHHCCCEEEECHHHHHHHHH
NILSAELIFQDQSYVIWPGNTILKPRSFASAWLDQSRPFNVYLGLKKQDTIESNVAVVPQ
HHHHHHHEEECCCEEEECCCCEECCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEE
LEDGADRNVRCVTTQQGNKHADLYSDGPEAEIQSLHYVLQVLWENEVEQLTDYNILPIAR
CCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LERKGELIQQSRHFIPPCYIMGGSEPLMRVVRDVRDDLAGRARQLEAYKSPREIRKAEFD
HHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
ASFLMFLLALRTLNRYVPLLYQLTESPLVHPRKVYDVLRQIVGELSTFSENCDMLGSTDE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
NSPGLPPYRHQDLAPGLLTVRDLIIRLLNEISIGPDFLITLEPSGEYLTAQLPNSLLEER
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEHHCCHHHHHCC
NRFYLIVRSDMAPDTLQDSFRARARLAEASAMPLLIQRALPGITLTPLSSVPEGLPRRSC
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCEECCCHHCCCCCCCCCC
SFYFKIDSQSEAWRQAAQSCHIAFSWFDAPDDVKVELVGVNR
EEEEEECCCHHHHHHHHHCCEEEEEEECCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA