Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238920636

Identifier: 238920636

GI number: 238920636

Start: 2645190

End: 2645819

Strand: Direct

Name: 238920636

Synonym: NT01EI_2748

Alternate gene names: NA

Gene position: 2645190-2645819 (Clockwise)

Preceding gene: 238920635

Following gene: 238920637

Centisome position: 69.39

GC content: 59.68

Gene sequence:

>630_bases
ATGATGAAGAATAAGACGATCTGGGGAGTCATCGGCTGCCTGCTGCTCAGTCTGACCGGCTGCTCATCCGATCCGGCAAA
GCAGCAGGCACGCCGCAATACGCAGTGGCTGTATGGCAGCCAGGCCGTTTTGGTTAATGTACAAACGGCCCCGGACCTGA
ACAGCTACGACGGCGAGTCGCACAGCCTGGTACTAGCGGTGGTTCAGGCCCGTTCACCTGACGCCTTTTATCAGTTAATC
CAAACATCCGAACTCGTCGGCCAGGTCTTGCAGGGCGGACGTCCCCCTGACGGAATTTTGCAGGTAAGCCGCTATGCGCT
GGAGCCCGGCCACGATTTCCGCCTGGTCCTGGATCGCCTGCAGGAGGCACACCAGGTGGGGCTCATCGCCGCTTTCTACG
GTCTACCGGTGGCGCAGACCTCCCGCCTGTTTGATATCCCGGTAAAAGTGACCCGCTCGGGGATACTGTTCCCGGACTGG
AAAGCCGCCCCCTCCCCTATGGCGTTGAACCTGAAACTGGGTAACAGCGGGATAAGCGAGGCGGTAATGAATCCGGTGGA
TAGCATCCCCTCGGCCAGCGCACCGACAGCATCGACGCCAATCCGGCTGAGCGATATCAGTGGACAATAG

Upstream 100 bases:

>100_bases
GATAAAGCTGTCCGCTGGGGCAATATGAGACTGGATGAATGGATCCGGGAGGTCGTGGATGACAACGGTACCCGGCGGAT
GCTCAAGGGTGTATTGGGTT

Downstream 100 bases:

>100_bases
GCTCAGGCCGACGGATCGCCTGTTATAAATAACAGATGACACATGCAGTTAGAGAAAAACTGCGCCGACTCTCCATACTT
GCCTTTAGGGTGATAGATGA

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion System Protein EvpL

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MMKNKTIWGVIGCLLLSLTGCSSDPAKQQARRNTQWLYGSQAVLVNVQTAPDLNSYDGESHSLVLAVVQARSPDAFYQLI
QTSELVGQVLQGGRPPDGILQVSRYALEPGHDFRLVLDRLQEAHQVGLIAAFYGLPVAQTSRLFDIPVKVTRSGILFPDW
KAAPSPMALNLKLGNSGISEAVMNPVDSIPSASAPTASTPIRLSDISGQ

Sequences:

>Translated_209_residues
MMKNKTIWGVIGCLLLSLTGCSSDPAKQQARRNTQWLYGSQAVLVNVQTAPDLNSYDGESHSLVLAVVQARSPDAFYQLI
QTSELVGQVLQGGRPPDGILQVSRYALEPGHDFRLVLDRLQEAHQVGLIAAFYGLPVAQTSRLFDIPVKVTRSGILFPDW
KAAPSPMALNLKLGNSGISEAVMNPVDSIPSASAPTASTPIRLSDISGQ
>Mature_209_residues
MMKNKTIWGVIGCLLLSLTGCSSDPAKQQARRNTQWLYGSQAVLVNVQTAPDLNSYDGESHSLVLAVVQARSPDAFYQLI
QTSELVGQVLQGGRPPDGILQVSRYALEPGHDFRLVLDRLQEAHQVGLIAAFYGLPVAQTSRLFDIPVKVTRSGILFPDW
KAAPSPMALNLKLGNSGISEAVMNPVDSIPSASAPTASTPIRLSDISGQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22452; Mature: 22452

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKNKTIWGVIGCLLLSLTGCSSDPAKQQARRNTQWLYGSQAVLVNVQTAPDLNSYDGES
CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEECCCEEEEEEECCCCCCCCCCCC
HSLVLAVVQARSPDAFYQLIQTSELVGQVLQGGRPPDGILQVSRYALEPGHDFRLVLDRL
CEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHH
QEAHQVGLIAAFYGLPVAQTSRLFDIPVKVTRSGILFPDWKAAPSPMALNLKLGNSGISE
HHHHHHHHHHHHHCCCHHHCCCEEECCCEEECCCCCCCCCCCCCCCEEEEEEECCCCHHH
AVMNPVDSIPSASAPTASTPIRLSDISGQ
HHHCHHHCCCCCCCCCCCCCEEEECCCCC
>Mature Secondary Structure
MMKNKTIWGVIGCLLLSLTGCSSDPAKQQARRNTQWLYGSQAVLVNVQTAPDLNSYDGES
CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEECCCEEEEEEECCCCCCCCCCCC
HSLVLAVVQARSPDAFYQLIQTSELVGQVLQGGRPPDGILQVSRYALEPGHDFRLVLDRL
CEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHH
QEAHQVGLIAAFYGLPVAQTSRLFDIPVKVTRSGILFPDWKAAPSPMALNLKLGNSGISE
HHHHHHHHHHHHHCCCHHHCCCEEECCCEEECCCCCCCCCCCCCCCEEEEEEECCCCHHH
AVMNPVDSIPSASAPTASTPIRLSDISGQ
HHHCHHHCCCCCCCCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA