Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238920638

Identifier: 238920638

GI number: 238920638

Start: 2647469

End: 2647951

Strand: Direct

Name: 238920638

Synonym: NT01EI_2750

Alternate gene names: NA

Gene position: 2647469-2647951 (Clockwise)

Preceding gene: 238920637

Following gene: 238920639

Centisome position: 69.45

GC content: 56.31

Gene sequence:

>483_bases
ATGTATGCCGTGGTGGCCTGGATAGATGAGACGATCATGTGTTCGGACTGGGACGGCGTTGCAACATGGCGCCGTGAGCC
ACTGCAGGCCAGTTACTTCAACACCGTCTGCGCCGGAGTTGACTTTTTCGACAGGCTGTCCGCACTGAGCCCCGAAGCCG
ACGACGTCAGAGAAGTCTATCTGCTGTGTCTGGCTCTGGGATTTGAGGGGCGCCATACCGGCAGCATGGGTCAGGCCACG
CTGGAACAGATCAGGATGCACCAACTGAAGACCCTGCACGGCGAGATATGGGAGGAGTCACAGCGTCTATTTCCGGAGGC
CTATCCGATACCCTCAGTCAAACCGCCGCAGCAAAAGCGATTGCTGACCAACAGCCGTTTTACCACCATCGTGGTGCCGC
TGGTCATATTGGTCGCACTGTATGGAATTCTGAACTGGGTATTATATGAGTATGCGGATGTCGCGCTGGAGTTGCTGCCA
TGA

Upstream 100 bases:

>100_bases
GGATGCATCATTATTTCGTGAACGGCTGCGATCATACCTGCACCTCAGCCGGAGCCGGGCCCAGGAGGGAGGGGAAACCC
CGGCCACGATCGATTCCGCT

Downstream 100 bases:

>100_bases
AACGTATCTTCAAATGGATAGCGATTGCACTGATTCTGATCATGCTGGCGATGCTGTGCTGGCTGCTCACGTTTTGGCAA
CGCTGGCCTGCCGCTGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MYAVVAWIDETIMCSDWDGVATWRREPLQASYFNTVCAGVDFFDRLSALSPEADDVREVYLLCLALGFEGRHTGSMGQAT
LEQIRMHQLKTLHGEIWEESQRLFPEAYPIPSVKPPQQKRLLTNSRFTTIVVPLVILVALYGILNWVLYEYADVALELLP

Sequences:

>Translated_160_residues
MYAVVAWIDETIMCSDWDGVATWRREPLQASYFNTVCAGVDFFDRLSALSPEADDVREVYLLCLALGFEGRHTGSMGQAT
LEQIRMHQLKTLHGEIWEESQRLFPEAYPIPSVKPPQQKRLLTNSRFTTIVVPLVILVALYGILNWVLYEYADVALELLP
>Mature_160_residues
MYAVVAWIDETIMCSDWDGVATWRREPLQASYFNTVCAGVDFFDRLSALSPEADDVREVYLLCLALGFEGRHTGSMGQAT
LEQIRMHQLKTLHGEIWEESQRLFPEAYPIPSVKPPQQKRLLTNSRFTTIVVPLVILVALYGILNWVLYEYADVALELLP

Specific function: Unknown

COG id: COG3455

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18250; Mature: 18250

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYAVVAWIDETIMCSDWDGVATWRREPLQASYFNTVCAGVDFFDRLSALSPEADDVREVY
CEEEEEECCCCCEECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LLCLALGFEGRHTGSMGQATLEQIRMHQLKTLHGEIWEESQRLFPEAYPIPSVKPPQQKR
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
LLTNSRFTTIVVPLVILVALYGILNWVLYEYADVALELLP
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYAVVAWIDETIMCSDWDGVATWRREPLQASYFNTVCAGVDFFDRLSALSPEADDVREVY
CEEEEEECCCCCEECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LLCLALGFEGRHTGSMGQATLEQIRMHQLKTLHGEIWEESQRLFPEAYPIPSVKPPQQKR
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
LLTNSRFTTIVVPLVILVALYGILNWVLYEYADVALELLP
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA