| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238920638
Identifier: 238920638
GI number: 238920638
Start: 2647469
End: 2647951
Strand: Direct
Name: 238920638
Synonym: NT01EI_2750
Alternate gene names: NA
Gene position: 2647469-2647951 (Clockwise)
Preceding gene: 238920637
Following gene: 238920639
Centisome position: 69.45
GC content: 56.31
Gene sequence:
>483_bases ATGTATGCCGTGGTGGCCTGGATAGATGAGACGATCATGTGTTCGGACTGGGACGGCGTTGCAACATGGCGCCGTGAGCC ACTGCAGGCCAGTTACTTCAACACCGTCTGCGCCGGAGTTGACTTTTTCGACAGGCTGTCCGCACTGAGCCCCGAAGCCG ACGACGTCAGAGAAGTCTATCTGCTGTGTCTGGCTCTGGGATTTGAGGGGCGCCATACCGGCAGCATGGGTCAGGCCACG CTGGAACAGATCAGGATGCACCAACTGAAGACCCTGCACGGCGAGATATGGGAGGAGTCACAGCGTCTATTTCCGGAGGC CTATCCGATACCCTCAGTCAAACCGCCGCAGCAAAAGCGATTGCTGACCAACAGCCGTTTTACCACCATCGTGGTGCCGC TGGTCATATTGGTCGCACTGTATGGAATTCTGAACTGGGTATTATATGAGTATGCGGATGTCGCGCTGGAGTTGCTGCCA TGA
Upstream 100 bases:
>100_bases GGATGCATCATTATTTCGTGAACGGCTGCGATCATACCTGCACCTCAGCCGGAGCCGGGCCCAGGAGGGAGGGGAAACCC CGGCCACGATCGATTCCGCT
Downstream 100 bases:
>100_bases AACGTATCTTCAAATGGATAGCGATTGCACTGATTCTGATCATGCTGGCGATGCTGTGCTGGCTGCTCACGTTTTGGCAA CGCTGGCCTGCCGCTGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MYAVVAWIDETIMCSDWDGVATWRREPLQASYFNTVCAGVDFFDRLSALSPEADDVREVYLLCLALGFEGRHTGSMGQAT LEQIRMHQLKTLHGEIWEESQRLFPEAYPIPSVKPPQQKRLLTNSRFTTIVVPLVILVALYGILNWVLYEYADVALELLP
Sequences:
>Translated_160_residues MYAVVAWIDETIMCSDWDGVATWRREPLQASYFNTVCAGVDFFDRLSALSPEADDVREVYLLCLALGFEGRHTGSMGQAT LEQIRMHQLKTLHGEIWEESQRLFPEAYPIPSVKPPQQKRLLTNSRFTTIVVPLVILVALYGILNWVLYEYADVALELLP >Mature_160_residues MYAVVAWIDETIMCSDWDGVATWRREPLQASYFNTVCAGVDFFDRLSALSPEADDVREVYLLCLALGFEGRHTGSMGQAT LEQIRMHQLKTLHGEIWEESQRLFPEAYPIPSVKPPQQKRLLTNSRFTTIVVPLVILVALYGILNWVLYEYADVALELLP
Specific function: Unknown
COG id: COG3455
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18250; Mature: 18250
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYAVVAWIDETIMCSDWDGVATWRREPLQASYFNTVCAGVDFFDRLSALSPEADDVREVY CEEEEEECCCCCEECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LLCLALGFEGRHTGSMGQATLEQIRMHQLKTLHGEIWEESQRLFPEAYPIPSVKPPQQKR HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH LLTNSRFTTIVVPLVILVALYGILNWVLYEYADVALELLP HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MYAVVAWIDETIMCSDWDGVATWRREPLQASYFNTVCAGVDFFDRLSALSPEADDVREVY CEEEEEECCCCCEECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LLCLALGFEGRHTGSMGQATLEQIRMHQLKTLHGEIWEESQRLFPEAYPIPSVKPPQQKR HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH LLTNSRFTTIVVPLVILVALYGILNWVLYEYADVALELLP HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA