Click here to switch to the map view.

The map label for this gene is 238920633

Identifier: 238920633

GI number: 238920633

Start: 2641737

End: 2643722

Strand: Direct

Name: 238920633

Synonym: NT01EI_2745

Alternate gene names: NA

Gene position: 2641737-2643722 (Clockwise)

Preceding gene: 238920632

Following gene: 238920634

Centisome position: 69.29

GC content: 57.85

Gene sequence:

>1986_bases
ATGGAATTAACGTCGGATAACCGGCTATTGTCCTTATCCACCCCGTTGGGCAAGAATACCTTACAGGTGGTGCAGTGCCG
TGGTGAAGAGTCGGTCTCCGACCTCTACCGCTTCGAGCTGGAGCTGTTCTCCACGGAGCCCACCCTGGAATGGCAAAAGC
TGGTCGGGCAGGCCGCCGCGCTGCGGCTGGCCTTACCGGATGGCCAGACCCGCTACTGGCATGGCGTGATCGGCCAGGCC
TCATACCGGGGTGCCGAGCAACACGGATATGCCTATTATGCCGAGCTGGTACCGCACCTGGCCTGGCTGCAGCACGCGCA
GGAGTGTCAGATCTTCCAAGAGAAGACGGTTCCGCAGATTATTGAAACCGTACTTAAGGCTCGGGGCATCAGCGATTTTC
GTCTATCCCTGTCGCAACACTACGCCCCCCGGGAATATTGCGTACAGTATCGCGAATCGGACCTCAGCTTTATTAGCCGG
CTGATGGAAGAAGAGGGAATCTTCTACTGGTTCGATCACAGCGAAAGCCACCATGTGATGGTATTGGCCGACAGCAACGC
CGCGGTTCAGCCCTGCAAGACGCACTCAGATATTGTCTACCGGCCAAAGCATATGAGTGAGTCCGGCGATGATATTCAGT
TGTGGATGCCCTCTCTCTCGGTCGTGCCGGCCAACGTCTTCCTAAACACCTATACCTTTGAACAGCCTACCGCCAGTTTG
CTGACATCCACTGCCTCGGTGGCCAGACAGGGCAAATTGAGTGACGTGGCGGTCTATGATTTTACGGACGGCTATACGCA
GACCCGGGAGGGCGAACGGCGAGCCAAGCTGAGAATGGAGGGACTGGAGGCGATGCAGGCCCGGATAGAGGGCGGCGGAC
GCTGCCGCACGCTGGCCCCGGGCTATTGGTTCAGCCTGCAAAAACATTTCCGCAAAGACTGTAACGATGACTATCTGCTG
TTAAGCGTACGACACGAGATCGTCAATAACCTGCCGTGGCAGAACCAAGAGGTGAACTACCAGAACCACTTCGTCTGCCT
GCCTAAATCCCTGCCCTACCGCCCCCTGAGCCAGGCTCCCCGTCCGGTGATCCATGGCGTACAGACGGCTGTGGTCACCG
GCCCGCAGGGTGAAGAGATCCACACCGATCTATATGGCCGGGTTAAGGTCCATTTTCACTGGGATCGACTGGGAAAGCAG
GATGATAAAAGCTCCTGCTGGATTCGGGTGGCGCAAGGCTGGGCTGGGCTGGGCTGGGGGGGGATGCAGCTACCCCGGGT
GGGACAGGAGGTGATTGTGGACTTTATCGATGGCAATCCGGACGCGCCCCTGATTACCGGCCGGGTCTATAACGCCAACC
AGACGCCCCCCTTCAAGTTGCCTGACAATAAGACCCAAAGCGGCATTCAGACCCGCAGCACGCCCAATGGCAATGCGGAG
CACTTCAGCCTGCTGCGCTTCGAGGACAAGATGGGCGCGGAAGAGGTGTTCATGCAGTCGGCGCGGGATTTTCGCCGTCT
GGTGAAGCACGATGACGAGCTTACGGTAGAGCATGACCGCCGGGTGACCATCAAGAATGACTGCTCTGAGACGGTCTCCG
AGGGGAACTACCTGCAGAGTATTACCAAGGGAAAGCATACCCGGATGATCGAGGGCGATACCTTAACGGAGGTCAAGTCA
GGCAACAGCACGTTACAGGTAGACAGGGGGGATCACGCCACCAGAGTCTCGGCAGGCAGCCTTCATCTGGAGGCCGGAAC
CTCGATAACCCTGAGCGTAGGCAGCAACCGTATCGTCATTGACAGCAGCGGCGTACTCATCGAGGGCATGGATATCACGG
TGAAGGGTAAACAGTCCATTGATGCCTCCGGCCTGAGCGTAGCAATAAAGGGAACCCAATCGGCCAGCCTGAGCAGTTCG
GCAGAGGTGGAGGTCTCCTCCTCCGTGATGACCTCCATCAAAGGCGGCATTGTCAAGATCAACTGA

Upstream 100 bases:

>100_bases
CGGTGCTGGCACAGATGGCCGCCGGCGAGCCGGTATCCGATATCACCATCGCGATGGATGAGCACGGCCGACTGACAGGA
TCGCTAGAGGGGAGTGAAGG

Downstream 100 bases:

>100_bases
TTTTCTGTATCTGCCCCCCGGAGAGCCTCCCCTTTTCCGTTCAGGCTCTGCGGTATGGTATTGGTATTTATACAACTGAA
TGAGGAGTCTATCCATGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; VgrG Protein; Rhs-Family Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; Rhs Accessory Genetic Element; Vgr-Related Protein; RHS Accessory Genetic Element; VgrG Family T6SS G; Two Component LuxR Family Transcriptional Regulator; Conserved Hypothethical Protein; Rhs Element Vgr Family; Rhs Element Vgr ProteinGp5-Like; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Type VI Secretion System Effector Protein VgrS; VrgG Protein; Vgr Protein

Number of amino acids: Translated: 661; Mature: 661

Protein sequence:

>661_residues
MELTSDNRLLSLSTPLGKNTLQVVQCRGEESVSDLYRFELELFSTEPTLEWQKLVGQAAALRLALPDGQTRYWHGVIGQA
SYRGAEQHGYAYYAELVPHLAWLQHAQECQIFQEKTVPQIIETVLKARGISDFRLSLSQHYAPREYCVQYRESDLSFISR
LMEEEGIFYWFDHSESHHVMVLADSNAAVQPCKTHSDIVYRPKHMSESGDDIQLWMPSLSVVPANVFLNTYTFEQPTASL
LTSTASVARQGKLSDVAVYDFTDGYTQTREGERRAKLRMEGLEAMQARIEGGGRCRTLAPGYWFSLQKHFRKDCNDDYLL
LSVRHEIVNNLPWQNQEVNYQNHFVCLPKSLPYRPLSQAPRPVIHGVQTAVVTGPQGEEIHTDLYGRVKVHFHWDRLGKQ
DDKSSCWIRVAQGWAGLGWGGMQLPRVGQEVIVDFIDGNPDAPLITGRVYNANQTPPFKLPDNKTQSGIQTRSTPNGNAE
HFSLLRFEDKMGAEEVFMQSARDFRRLVKHDDELTVEHDRRVTIKNDCSETVSEGNYLQSITKGKHTRMIEGDTLTEVKS
GNSTLQVDRGDHATRVSAGSLHLEAGTSITLSVGSNRIVIDSSGVLIEGMDITVKGKQSIDASGLSVAIKGTQSASLSSS
AEVEVSSSVMTSIKGGIVKIN

Sequences:

>Translated_661_residues
MELTSDNRLLSLSTPLGKNTLQVVQCRGEESVSDLYRFELELFSTEPTLEWQKLVGQAAALRLALPDGQTRYWHGVIGQA
SYRGAEQHGYAYYAELVPHLAWLQHAQECQIFQEKTVPQIIETVLKARGISDFRLSLSQHYAPREYCVQYRESDLSFISR
LMEEEGIFYWFDHSESHHVMVLADSNAAVQPCKTHSDIVYRPKHMSESGDDIQLWMPSLSVVPANVFLNTYTFEQPTASL
LTSTASVARQGKLSDVAVYDFTDGYTQTREGERRAKLRMEGLEAMQARIEGGGRCRTLAPGYWFSLQKHFRKDCNDDYLL
LSVRHEIVNNLPWQNQEVNYQNHFVCLPKSLPYRPLSQAPRPVIHGVQTAVVTGPQGEEIHTDLYGRVKVHFHWDRLGKQ
DDKSSCWIRVAQGWAGLGWGGMQLPRVGQEVIVDFIDGNPDAPLITGRVYNANQTPPFKLPDNKTQSGIQTRSTPNGNAE
HFSLLRFEDKMGAEEVFMQSARDFRRLVKHDDELTVEHDRRVTIKNDCSETVSEGNYLQSITKGKHTRMIEGDTLTEVKS
GNSTLQVDRGDHATRVSAGSLHLEAGTSITLSVGSNRIVIDSSGVLIEGMDITVKGKQSIDASGLSVAIKGTQSASLSSS
AEVEVSSSVMTSIKGGIVKIN
>Mature_661_residues
MELTSDNRLLSLSTPLGKNTLQVVQCRGEESVSDLYRFELELFSTEPTLEWQKLVGQAAALRLALPDGQTRYWHGVIGQA
SYRGAEQHGYAYYAELVPHLAWLQHAQECQIFQEKTVPQIIETVLKARGISDFRLSLSQHYAPREYCVQYRESDLSFISR
LMEEEGIFYWFDHSESHHVMVLADSNAAVQPCKTHSDIVYRPKHMSESGDDIQLWMPSLSVVPANVFLNTYTFEQPTASL
LTSTASVARQGKLSDVAVYDFTDGYTQTREGERRAKLRMEGLEAMQARIEGGGRCRTLAPGYWFSLQKHFRKDCNDDYLL
LSVRHEIVNNLPWQNQEVNYQNHFVCLPKSLPYRPLSQAPRPVIHGVQTAVVTGPQGEEIHTDLYGRVKVHFHWDRLGKQ
DDKSSCWIRVAQGWAGLGWGGMQLPRVGQEVIVDFIDGNPDAPLITGRVYNANQTPPFKLPDNKTQSGIQTRSTPNGNAE
HFSLLRFEDKMGAEEVFMQSARDFRRLVKHDDELTVEHDRRVTIKNDCSETVSEGNYLQSITKGKHTRMIEGDTLTEVKS
GNSTLQVDRGDHATRVSAGSLHLEAGTSITLSVGSNRIVIDSSGVLIEGMDITVKGKQSIDASGLSVAIKGTQSASLSSS
AEVEVSSSVMTSIKGGIVKIN

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73908; Mature: 73908

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELTSDNRLLSLSTPLGKNTLQVVQCRGEESVSDLYRFELELFSTEPTLEWQKLVGQAAA
CCCCCCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHEEEEEECCCCCHHHHHHHCCHHE
LRLALPDGQTRYWHGVIGQASYRGAEQHGYAYYAELVPHLAWLQHAQECQIFQEKTVPQI
EEEECCCCCCEEEEEECCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
IETVLKARGISDFRLSLSQHYAPREYCVQYRESDLSFISRLMEEEGIFYWFDHSESHHVM
HHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEE
VLADSNAAVQPCKTHSDIVYRPKHMSESGDDIQLWMPSLSVVPANVFLNTYTFEQPTASL
EEECCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCEEEEEEEEEEEEECCCCHHHH
LTSTASVARQGKLSDVAVYDFTDGYTQTREGERRAKLRMEGLEAMQARIEGGGRCRTLAP
HHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECC
GYWFSLQKHFRKDCNDDYLLLSVRHEIVNNLPWQNQEVNYQNHFVCLPKSLPYRPLSQAP
CHHHHHHHHHHHCCCCCEEEEEEHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCHHHCC
RPVIHGVQTAVVTGPQGEEIHTDLYGRVKVHFHWDRLGKQDDKSSCWIRVAQGWAGLGWG
CHHHHCCEEEEEECCCCCCEEECCEEEEEEEEEHHHCCCCCCCCCEEEEEECCCCCCCCC
GMQLPRVGQEVIVDFIDGNPDAPLITGRVYNANQTPPFKLPDNKTQSGIQTRSTPNGNAE
CCCCCCCCHHHEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEECCCCCCCCC
HFSLLRFEDKMGAEEVFMQSARDFRRLVKHDDELTVEHDRRVTIKNDCSETVSEGNYLQS
CEEEEEEHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEECCCHHHHHHCCHHHHH
ITKGKHTRMIEGDTLTEVKSGNSTLQVDRGDHATRVSAGSLHLEAGTSITLSVGSNRIVI
HHCCCCEEEECCCCEEEECCCCCEEEEECCCCCEEEECCEEEEECCCEEEEEECCCEEEE
DSSGVLIEGMDITVKGKQSIDASGLSVAIKGTQSASLSSSAEVEVSSSVMTSIKGGIVKI
ECCCCEEECCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCEEEHHHHHHHHCCCEEEE
N
C
>Mature Secondary Structure
MELTSDNRLLSLSTPLGKNTLQVVQCRGEESVSDLYRFELELFSTEPTLEWQKLVGQAAA
CCCCCCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHEEEEEECCCCCHHHHHHHCCHHE
LRLALPDGQTRYWHGVIGQASYRGAEQHGYAYYAELVPHLAWLQHAQECQIFQEKTVPQI
EEEECCCCCCEEEEEECCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
IETVLKARGISDFRLSLSQHYAPREYCVQYRESDLSFISRLMEEEGIFYWFDHSESHHVM
HHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEE
VLADSNAAVQPCKTHSDIVYRPKHMSESGDDIQLWMPSLSVVPANVFLNTYTFEQPTASL
EEECCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCEEEEEEEEEEEEECCCCHHHH
LTSTASVARQGKLSDVAVYDFTDGYTQTREGERRAKLRMEGLEAMQARIEGGGRCRTLAP
HHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECC
GYWFSLQKHFRKDCNDDYLLLSVRHEIVNNLPWQNQEVNYQNHFVCLPKSLPYRPLSQAP
CHHHHHHHHHHHCCCCCEEEEEEHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCHHHCC
RPVIHGVQTAVVTGPQGEEIHTDLYGRVKVHFHWDRLGKQDDKSSCWIRVAQGWAGLGWG
CHHHHCCEEEEEECCCCCCEEECCEEEEEEEEEHHHCCCCCCCCCEEEEEECCCCCCCCC
GMQLPRVGQEVIVDFIDGNPDAPLITGRVYNANQTPPFKLPDNKTQSGIQTRSTPNGNAE
CCCCCCCCHHHEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEECCCCCCCCC
HFSLLRFEDKMGAEEVFMQSARDFRRLVKHDDELTVEHDRRVTIKNDCSETVSEGNYLQS
CEEEEEEHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEECCCHHHHHHCCHHHHH
ITKGKHTRMIEGDTLTEVKSGNSTLQVDRGDHATRVSAGSLHLEAGTSITLSVGSNRIVI
HHCCCCEEEECCCCEEEECCCCCEEEEECCCCCEEEECCEEEEECCCEEEEEECCCEEEE
DSSGVLIEGMDITVKGKQSIDASGLSVAIKGTQSASLSSSAEVEVSSSVMTSIKGGIVKI
ECCCCEEECCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCEEEHHHHHHHHCCCEEEE
N
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA