| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238920634
Identifier: 238920634
GI number: 238920634
Start: 2643817
End: 2644119
Strand: Direct
Name: 238920634
Synonym: NT01EI_2746
Alternate gene names: NA
Gene position: 2643817-2644119 (Clockwise)
Preceding gene: 238920633
Following gene: 238920635
Centisome position: 69.35
GC content: 66.01
Gene sequence:
>303_bases ATGGGACAACCTGCCGCACGTTTGACGGATATGCATGTCTGCCCGATGCAGACCCCGGGCGTCCCCCCGGTACCGCACGT CGGCGGGCCAGTCATCGGCCCCGGCGTTCCCACGGTACTGATCGGTGGACTGCCGGCGGCGGTACTGGGTGACATGCTGA CCTGTGTTGGTCCTCCCGACACCATTGTCAAGGGCAGTGCCACAGTGCTGATCGGTGGCAAGCCCGCCGCCCGCATGGGG GACAGCACAGCTCACGGCGGCACCATCACGCTGGGTTGCCCCACCGTGTTGATTGGCGGTTAA
Upstream 100 bases:
>100_bases AACTGATTTTCTGTATCTGCCCCCCGGAGAGCCTCCCCTTTTCCGTTCAGGCTCTGCGGTATGGTATTGGTATTTATACA ACTGAATGAGGAGTCTATCC
Downstream 100 bases:
>100_bases GGGAGAGTGTTATATGAATATCTTGGATATGGCGCGTTTACTGGCTCCCATCAGTGAGCACCATCCGGCGGGAGAGGATA TCAGCTTCGACCCACTATAC
Product: hypothetical protein
Products: NA
Alternate protein names: Type VI Secretion System Protein EvpJ; Type VI Secretion PAAR Domain Protein; PAAR Motif Family; PAAR Domain-Containing Protein Containing Protein; Superfamily II DNA Helicase
Number of amino acids: Translated: 100; Mature: 99
Protein sequence:
>100_residues MGQPAARLTDMHVCPMQTPGVPPVPHVGGPVIGPGVPTVLIGGLPAAVLGDMLTCVGPPDTIVKGSATVLIGGKPAARMG DSTAHGGTITLGCPTVLIGG
Sequences:
>Translated_100_residues MGQPAARLTDMHVCPMQTPGVPPVPHVGGPVIGPGVPTVLIGGLPAAVLGDMLTCVGPPDTIVKGSATVLIGGKPAARMG DSTAHGGTITLGCPTVLIGG >Mature_99_residues GQPAARLTDMHVCPMQTPGVPPVPHVGGPVIGPGVPTVLIGGLPAAVLGDMLTCVGPPDTIVKGSATVLIGGKPAARMGD STAHGGTITLGCPTVLIGG
Specific function: Unknown
COG id: COG4104
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9652; Mature: 9520
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQPAARLTDMHVCPMQTPGVPPVPHVGGPVIGPGVPTVLIGGLPAAVLGDMLTCVGPPD CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCC TIVKGSATVLIGGKPAARMGDSTAHGGTITLGCPTVLIGG CEECCCEEEEECCCCCCCCCCCCCCCCEEEECCCEEEECC >Mature Secondary Structure GQPAARLTDMHVCPMQTPGVPPVPHVGGPVIGPGVPTVLIGGLPAAVLGDMLTCVGPPD CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCC TIVKGSATVLIGGKPAARMGDSTAHGGTITLGCPTVLIGG CEECCCEEEEECCCCCCCCCCCCCCCCEEEECCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA