| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is menH [H]
Identifier: 238920537
GI number: 238920537
Start: 2543241
End: 2544014
Strand: Reverse
Name: menH [H]
Synonym: NT01EI_2649
Alternate gene names: 238920537
Gene position: 2544014-2543241 (Counterclockwise)
Preceding gene: 238920538
Following gene: 238920536
Centisome position: 66.73
GC content: 68.6
Gene sequence:
>774_bases GTGATCCTGGCCTATCGCCGTCTGGCGGCTGCGTCTCCCGATGCGCCGACCCTGGTATGGCTGCACGGTTTTCTCGGCAG TCACCGTGAGTGGCTGGCGCAGGCGCAGGCATTGCCACAGTATGCGCATGTGCTGATCGATCTACCGGGGCACGGTGACT CGGCGGCGCTGACGGTGGACGACTTTGCCCGGTGCGATGCCGCGCTGCGCGATACGCTGCGCGCCGCCGGGGTAACGTCC TATGGGCTGATCGGCTATTCGCTGGGCGGTCGCCTGGCGATGTATCATGGCTGTCAGGGTGCATCCGGTCTATGGGCGCT GGCGGTCGAGGGGGGAAACCCCGGACTGGAGACGCCCGCGGAGCGCCAGGCGCGGCAGGCACATGACGGCCGCTGGGCCG ACCGCCTGCGCAGCGAGCCGCTGGCGCAGGTGCTGGATGATTGGTATCGACAGCCGGTGTTTGCCGATCTGGATGAGTCG GCGCGGGCCGACCTGGTGTCGCTGCGCGCCGGCCAGCCCGGTGCGGCGCTGGCGCAGATGCTGCAGGCGACCTCGCTGGG TGTCCAGCCACCGCTGGGCGCGGCGCTGGCGACACTGACCTGTCCGTTATGTTATCTGTGCGGTGAACAGGACACCAAGT TTCGCACGCTGGCCGGGCGTTGGCGGCTGGCGGTACGTCTGATAGACGGCGCCGGCCACAACGCCCACCGCGCCAACCCG CGGGCGTTTCGCGACGCGCTGGGAACCTTTTTAACGACATCAACCCCCGGCTGA
Upstream 100 bases:
>100_bases AGGGCTGGCGGCGTTGCGGGACGACGCTGATCGAACTGCGGGTACCCGGCACGGCGGGCGCGGAGGCGCTGCAGCAGCTG CTGGGTAAGGTGGCCGCGCT
Downstream 100 bases:
>100_bases CGCGCCAGACGCGCCGCCGGGTCGGCATCTTTATTAACAGGAAACGTATTATGCTGTATCCAAGCGAACAAGAGCTGTAT GCCCCGATCGCATGGCAGGA
Product: 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase
Products: NA
Alternate protein names: SHCHC synthase [H]
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MILAYRRLAAASPDAPTLVWLHGFLGSHREWLAQAQALPQYAHVLIDLPGHGDSAALTVDDFARCDAALRDTLRAAGVTS YGLIGYSLGGRLAMYHGCQGASGLWALAVEGGNPGLETPAERQARQAHDGRWADRLRSEPLAQVLDDWYRQPVFADLDES ARADLVSLRAGQPGAALAQMLQATSLGVQPPLGAALATLTCPLCYLCGEQDTKFRTLAGRWRLAVRLIDGAGHNAHRANP RAFRDALGTFLTTSTPG
Sequences:
>Translated_257_residues MILAYRRLAAASPDAPTLVWLHGFLGSHREWLAQAQALPQYAHVLIDLPGHGDSAALTVDDFARCDAALRDTLRAAGVTS YGLIGYSLGGRLAMYHGCQGASGLWALAVEGGNPGLETPAERQARQAHDGRWADRLRSEPLAQVLDDWYRQPVFADLDES ARADLVSLRAGQPGAALAQMLQATSLGVQPPLGAALATLTCPLCYLCGEQDTKFRTLAGRWRLAVRLIDGAGHNAHRANP RAFRDALGTFLTTSTPG >Mature_257_residues MILAYRRLAAASPDAPTLVWLHGFLGSHREWLAQAQALPQYAHVLIDLPGHGDSAALTVDDFARCDAALRDTLRAAGVTS YGLIGYSLGGRLAMYHGCQGASGLWALAVEGGNPGLETPAERQARQAHDGRWADRLRSEPLAQVLDDWYRQPVFADLDES ARADLVSLRAGQPGAALAQMLQATSLGVQPPLGAALATLTCPLCYLCGEQDTKFRTLAGRWRLAVRLIDGAGHNAHRANP RAFRDALGTFLTTSTPG
Specific function: Catalyzes a proton abstraction reaction that results in 2,5-elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6- hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC). Is also
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. MenH family [H]
Homologues:
Organism=Escherichia coli, GI1788598, Length=240, Percent_Identity=47.9166666666667, Blast_Score=222, Evalue=2e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR022485 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =4.2.99.20 [H]
Molecular weight: Translated: 27503; Mature: 27503
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILAYRRLAAASPDAPTLVWLHGFLGSHREWLAQAQALPQYAHVLIDLPGHGDSAALTVD CEECHHHHHCCCCCCCEEEHHHHHHCCHHHHHHHHHHCHHHEEEEEECCCCCCCCEEEHH DFARCDAALRDTLRAAGVTSYGLIGYSLGGRLAMYHGCQGASGLWALAVEGGNPGLETPA HHHHHHHHHHHHHHHCCCCHHHHHEECCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCH ERQARQAHDGRWADRLRSEPLAQVLDDWYRQPVFADLDESARADLVSLRAGQPGAALAQM HHHHHHHHCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHH LQATSLGVQPPLGAALATLTCPLCYLCGEQDTKFRTLAGRWRLAVRLIDGAGHNAHRANP HHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEEEEECCCCCCCCCCCH RAFRDALGTFLTTSTPG HHHHHHHHHHHHCCCCC >Mature Secondary Structure MILAYRRLAAASPDAPTLVWLHGFLGSHREWLAQAQALPQYAHVLIDLPGHGDSAALTVD CEECHHHHHCCCCCCCEEEHHHHHHCCHHHHHHHHHHCHHHEEEEEECCCCCCCCEEEHH DFARCDAALRDTLRAAGVTSYGLIGYSLGGRLAMYHGCQGASGLWALAVEGGNPGLETPA HHHHHHHHHHHHHHHCCCCHHHHHEECCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCH ERQARQAHDGRWADRLRSEPLAQVLDDWYRQPVFADLDESARADLVSLRAGQPGAALAQM HHHHHHHHCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHH LQATSLGVQPPLGAALATLTCPLCYLCGEQDTKFRTLAGRWRLAVRLIDGAGHNAHRANP HHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEEEEECCCCCCCCCCCH RAFRDALGTFLTTSTPG HHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA