| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238920483
Identifier: 238920483
GI number: 238920483
Start: 2488811
End: 2488942
Strand: Reverse
Name: 238920483
Synonym: NT01EI_2594
Alternate gene names: NA
Gene position: 2488942-2488811 (Counterclockwise)
Preceding gene: 238920487
Following gene: 238920481
Centisome position: 65.29
GC content: 40.91
Gene sequence:
>132_bases ATGCCAACTATTTATTTATATTCATTATCAATTAGTTACATTTATCTCTGGCCAAAAGATACAGCGCTGGGGCAGGTGTG GGGTGGTGAGTTGCACTATTTTAGTGCGTTGCGTTCTATACTGGTGCGATAG
Upstream 100 bases:
>100_bases CCAGGGCTGCCACGGAGGCTTTCAACATTGCTTTCATCGTAATGGTTCCTTGTCTTTGCGATAAGCCGCTTGTATTTGAC CGGGATGTAATGAAAAAAAC
Downstream 100 bases:
>100_bases CGGTTTATGCGTTAACTATTTTGGTGCACTAGTGGAGGGGTATGGTGCGAGAGAATATTATCTTACTCATATTGCTTTAT TTTTGTTCAGCTGAGTGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 43; Mature: 42
Protein sequence:
>43_residues MPTIYLYSLSISYIYLWPKDTALGQVWGGELHYFSALRSILVR
Sequences:
>Translated_43_residues MPTIYLYSLSISYIYLWPKDTALGQVWGGELHYFSALRSILVR >Mature_42_residues PTIYLYSLSISYIYLWPKDTALGQVWGGELHYFSALRSILVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5023; Mature: 4892
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTIYLYSLSISYIYLWPKDTALGQVWGGELHYFSALRSILVR CCEEEEEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure PTIYLYSLSISYIYLWPKDTALGQVWGGELHYFSALRSILVR CEEEEEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA