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The map label for this gene is yegW [H]

Identifier: 238920213

GI number: 238920213

Start: 2220093

End: 2220851

Strand: Direct

Name: yegW [H]

Synonym: NT01EI_2322

Alternate gene names: 238920213

Gene position: 2220093-2220851 (Clockwise)

Preceding gene: 238920212

Following gene: 238920215

Centisome position: 58.23

GC content: 61.79

Gene sequence:

>759_bases
ATGAGTGCCGACCCGATCCCACTGTTACAAAAGCTGCGTGACGATCTCGCGCAAAGCGGCTCCATGCCGATCTATCTGCG
CTTTAACGAATCCATCCGCCAGGCTATCGCCCAGGGCATGCTGCAGCCGGGTGATTTTCTGCCCAGCGAGCGCGCCTTTA
CCGATGCCCTGAAAATCTCACGCATTACGGTACGCAAGGCGCTGGCCTGCCTCGAGCAGGATGACATTATTGACCGCGGA
CGCGGCTTTGGCACCCAGATCAAGCAGGTGCCAATGTCCTCGCTGGCCTACTCGCTGGCCAACATCAAAGGCTTCTCCGG
TGAGGTCGCCATGCAAGGGCGCCAGCCCGGCACCCGCTGGCTGTCACGTGAGCTGGTGCCCGCCTCGGCAACCATCGCCG
ACAAGCTGGGCATTGCGATCGATACCCCGGTCTACCGTCTGGAGCGCATCCGCACCGTGGACGGCCAGGCGCTCTCCGTC
GCCATCTCCTACGTGATACGCGAGGCTATCGATGACTGTCAGGCGATCGGCGAATCACTGTATGACTACCTGCGTGCCCG
CCAGATCCAGTTTGGGCGCCTCTCCAGCCAAATCGGCGCCTGTCTGGCCGACCCCTCGCTGCAGCAGAAGCTGGAGATCG
GCGCACCGACCGCCATGCTGGTGATCCGTCAGGTGCTCAGCGATCGCACCCAACGCCCCCTGGAGTACAGCATTAACTAC
TGCCGCGGAGATATGTACGAATACACGGCCGAGGAGTAA

Upstream 100 bases:

>100_bases
CACTGCGCTGACTTTTTACTTCTGCCACGTCCCGTCTGCGACTACACTGAGCTCCTACAACATTGCTTATCATTGAGACC
ATCTCCGGACCCTGAACGCT

Downstream 100 bases:

>100_bases
ATGGCGGGGCCATCCATCACGACGCCCCGATCTGGGTGACGACAGCGCAACTCACCCTGCGCAGCGCCGCTGGCGCAGAC
GCATCAGCCCGGTACTGTAG

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MSADPIPLLQKLRDDLAQSGSMPIYLRFNESIRQAIAQGMLQPGDFLPSERAFTDALKISRITVRKALACLEQDDIIDRG
RGFGTQIKQVPMSSLAYSLANIKGFSGEVAMQGRQPGTRWLSRELVPASATIADKLGIAIDTPVYRLERIRTVDGQALSV
AISYVIREAIDDCQAIGESLYDYLRARQIQFGRLSSQIGACLADPSLQQKLEIGAPTAMLVIRQVLSDRTQRPLEYSINY
CRGDMYEYTAEE

Sequences:

>Translated_252_residues
MSADPIPLLQKLRDDLAQSGSMPIYLRFNESIRQAIAQGMLQPGDFLPSERAFTDALKISRITVRKALACLEQDDIIDRG
RGFGTQIKQVPMSSLAYSLANIKGFSGEVAMQGRQPGTRWLSRELVPASATIADKLGIAIDTPVYRLERIRTVDGQALSV
AISYVIREAIDDCQAIGESLYDYLRARQIQFGRLSSQIGACLADPSLQQKLEIGAPTAMLVIRQVLSDRTQRPLEYSINY
CRGDMYEYTAEE
>Mature_251_residues
SADPIPLLQKLRDDLAQSGSMPIYLRFNESIRQAIAQGMLQPGDFLPSERAFTDALKISRITVRKALACLEQDDIIDRGR
GFGTQIKQVPMSSLAYSLANIKGFSGEVAMQGRQPGTRWLSRELVPASATIADKLGIAIDTPVYRLERIRTVDGQALSVA
ISYVIREAIDDCQAIGESLYDYLRARQIQFGRLSSQIGACLADPSLQQKLEIGAPTAMLVIRQVLSDRTQRPLEYSINYC
RGDMYEYTAEE

Specific function: Unknown

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788418, Length=245, Percent_Identity=37.5510204081633, Blast_Score=195, Evalue=2e-51,
Organism=Escherichia coli, GI1790540, Length=213, Percent_Identity=31.4553990610329, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1786950, Length=235, Percent_Identity=25.9574468085106, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI87082252, Length=215, Percent_Identity=26.5116279069767, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1790118, Length=227, Percent_Identity=24.2290748898678, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR011663
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF07702 UTRA [H]

EC number: NA

Molecular weight: Translated: 27997; Mature: 27865

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSADPIPLLQKLRDDLAQSGSMPIYLRFNESIRQAIAQGMLQPGDFLPSERAFTDALKIS
CCCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
RITVRKALACLEQDDIIDRGRGFGTQIKQVPMSSLAYSLANIKGFSGEVAMQGRQPGTRW
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHH
LSRELVPASATIADKLGIAIDTPVYRLERIRTVDGQALSVAISYVIREAIDDCQAIGESL
HHHHCCCCHHHHHHHCCCEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YDYLRARQIQFGRLSSQIGACLADPSLQQKLEIGAPTAMLVIRQVLSDRTQRPLEYSINY
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHH
CRGDMYEYTAEE
HCCCHHHCCCCC
>Mature Secondary Structure 
SADPIPLLQKLRDDLAQSGSMPIYLRFNESIRQAIAQGMLQPGDFLPSERAFTDALKIS
CCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
RITVRKALACLEQDDIIDRGRGFGTQIKQVPMSSLAYSLANIKGFSGEVAMQGRQPGTRW
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHH
LSRELVPASATIADKLGIAIDTPVYRLERIRTVDGQALSVAISYVIREAIDDCQAIGESL
HHHHCCCCHHHHHHHCCCEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YDYLRARQIQFGRLSSQIGACLADPSLQQKLEIGAPTAMLVIRQVLSDRTQRPLEYSINY
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHH
CRGDMYEYTAEE
HCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]