Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238920193

Identifier: 238920193

GI number: 238920193

Start: 2199032

End: 2199871

Strand: Reverse

Name: 238920193

Synonym: NT01EI_2302

Alternate gene names: NA

Gene position: 2199871-2199032 (Counterclockwise)

Preceding gene: 238920201

Following gene: 238920192

Centisome position: 57.7

GC content: 54.52

Gene sequence:

>840_bases
ATGTCATCAGTTGATTGTCTGAGCTCAGGGGGGTATGCTAGAAAGGCAACGGCAAAATCCGTTGCCGGGATTTGCACCCC
GGAATTGATCACAGCGCACGACCGCGCTTTAGCGGTTTTTTTGTGTGCGATGCACGGCTACATCCAGTTTATGGTGGGGC
GTGCAGGGCAGTCTTCGGACTGGCCGGTTTCTGTGGTCACCGGTAGTGCAAACCCTGCACGTCTCACCACCCATGAGATT
TGCACCTCTAGTGGTGAGTTGAAAAAACTGACCACAGAGGCTGCCATCATGGCTACGATCCCCGTCCCCGATCACCCTGA
AATCACCGTTATCAACGGCCAGGTTGTTACTTCTTCTGTCGCTATTGCTGACTATTTCCTTAAGCGTCACGATGACGTTC
TAAAGAAGATCCGCACTCTCGAATGTTCCCCCGGTTTTCATGCCCGCAATTTTGCGGTTTGCCGTAAAAACAGTGCGTTA
CAGAACGGCAAACCTCAACCCTACTACCAAATCACCCGCGATGGTTTCGCGTTCCTGGCGATGGGCTTTACCGGCAAGCG
GGCGGCCCGGTTCAAAGAAGCCTACATCACCGCCTTTAGCCAGATGGAAAGGGCCCTAAACGGCGCACCAGCGCTACCGG
GCCCCGCACACAATGCGCACGCTGTATATCTCTACATGACAGAGATCCACCGGGTGTGGATGGCTCACCTGCGCCCCATG
CTGGTGGCTTCCCAGTCTCCCTTGGCTCATAGCCTGCATGACTACATCAACGATGGTCTTTTCGCCTCAGCGCTTGTCGA
TCGTTCGCTGAACAGCAACAAGGAGGTATGCCATGAGTAG

Upstream 100 bases:

>100_bases
CTTTCAGCACTTCGCGCTTTTTGTAGATCAGTTGAGCTGGCACGGTGTTACCTCCTGTACTGATGTCAACCATAACATCA
CCCTTTTGGTGATGTCAACG

Downstream 100 bases:

>100_bases
CAAATTGCATGGTCTGGTATGGGAAGGGTGTGCCCATGCTGGTCTGATCCTTTCCCGCGTGGCTGTGATGGCACGGCTGG
CGGATTACAGCAACGATGAG

Product: hypothetical protein

Products: NA

Alternate protein names: Rha Family Phage Regulatory Protein; Antirepressor; Bacteriophage Protein; Rha Protein; Antirepressor Phage; CI Repressor; Phage-Encoded Protein-Like Protein; Phage-Like Protein; Immunity Region Phage; Phage Associated Conserved Protein; Phage-Related Antirepressor; Prophage CI Repressor; Phage-Encoded Protein; Gene Complete Cds; Phage Antirepressor; Phage-Encoded Protein-Like; Phage Immunity Protein; Rha Phage Protein

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MSSVDCLSSGGYARKATAKSVAGICTPELITAHDRALAVFLCAMHGYIQFMVGRAGQSSDWPVSVVTGSANPARLTTHEI
CTSSGELKKLTTEAAIMATIPVPDHPEITVINGQVVTSSVAIADYFLKRHDDVLKKIRTLECSPGFHARNFAVCRKNSAL
QNGKPQPYYQITRDGFAFLAMGFTGKRAARFKEAYITAFSQMERALNGAPALPGPAHNAHAVYLYMTEIHRVWMAHLRPM
LVASQSPLAHSLHDYINDGLFASALVDRSLNSNKEVCHE

Sequences:

>Translated_279_residues
MSSVDCLSSGGYARKATAKSVAGICTPELITAHDRALAVFLCAMHGYIQFMVGRAGQSSDWPVSVVTGSANPARLTTHEI
CTSSGELKKLTTEAAIMATIPVPDHPEITVINGQVVTSSVAIADYFLKRHDDVLKKIRTLECSPGFHARNFAVCRKNSAL
QNGKPQPYYQITRDGFAFLAMGFTGKRAARFKEAYITAFSQMERALNGAPALPGPAHNAHAVYLYMTEIHRVWMAHLRPM
LVASQSPLAHSLHDYINDGLFASALVDRSLNSNKEVCHE
>Mature_278_residues
SSVDCLSSGGYARKATAKSVAGICTPELITAHDRALAVFLCAMHGYIQFMVGRAGQSSDWPVSVVTGSANPARLTTHEIC
TSSGELKKLTTEAAIMATIPVPDHPEITVINGQVVTSSVAIADYFLKRHDDVLKKIRTLECSPGFHARNFAVCRKNSALQ
NGKPQPYYQITRDGFAFLAMGFTGKRAARFKEAYITAFSQMERALNGAPALPGPAHNAHAVYLYMTEIHRVWMAHLRPML
VASQSPLAHSLHDYINDGLFASALVDRSLNSNKEVCHE

Specific function: Unknown

COG id: COG3646

COG function: function code S; Uncharacterized phage-encoded protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30377; Mature: 30246

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVDCLSSGGYARKATAKSVAGICTPELITAHDRALAVFLCAMHGYIQFMVGRAGQSSD
CCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
WPVSVVTGSANPARLTTHEICTSSGELKKLTTEAAIMATIPVPDHPEITVINGQVVTSSV
CCEEEEECCCCCCEEHHHHHHCCCCCHHHHHHCEEEEEEECCCCCCCEEEECCEEEEHHH
AIADYFLKRHDDVLKKIRTLECSPGFHARNFAVCRKNSALQNGKPQPYYQITRDGFAFLA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHCCCCCCCCEEEECCCEEEEE
MGFTGKRAARFKEAYITAFSQMERALNGAPALPGPAHNAHAVYLYMTEIHRVWMAHLRPM
ECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHH
LVASQSPLAHSLHDYINDGLFASALVDRSLNSNKEVCHE
HHCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHCC
>Mature Secondary Structure 
SSVDCLSSGGYARKATAKSVAGICTPELITAHDRALAVFLCAMHGYIQFMVGRAGQSSD
CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
WPVSVVTGSANPARLTTHEICTSSGELKKLTTEAAIMATIPVPDHPEITVINGQVVTSSV
CCEEEEECCCCCCEEHHHHHHCCCCCHHHHHHCEEEEEEECCCCCCCEEEECCEEEEHHH
AIADYFLKRHDDVLKKIRTLECSPGFHARNFAVCRKNSALQNGKPQPYYQITRDGFAFLA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHCCCCCCCCEEEECCCEEEEE
MGFTGKRAARFKEAYITAFSQMERALNGAPALPGPAHNAHAVYLYMTEIHRVWMAHLRPM
ECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHH
LVASQSPLAHSLHDYINDGLFASALVDRSLNSNKEVCHE
HHCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA