Click here to switch to the map view.

The map label for this gene is yfdO [H]

Identifier: 238920192

GI number: 238920192

Start: 2198041

End: 2199039

Strand: Reverse

Name: yfdO [H]

Synonym: NT01EI_2301

Alternate gene names: 238920192

Gene position: 2199039-2198041 (Counterclockwise)

Preceding gene: 238920193

Following gene: 238920191

Centisome position: 57.68

GC content: 58.56

Gene sequence:

>999_bases
ATGAGTAGCAAATTGCATGGTCTGGTATGGGAAGGGTGTGCCCATGCTGGTCTGATCCTTTCCCGCGTGGCTGTGATGGC
ACGGCTGGCGGATTACAGCAACGATGAGGGGCTGTCGTGGCCGGCGGTGGAGACTATCCAGCGTCAGATAGGTGCCAGGA
GCAAGACCACCGTTTCGGCGGCGATAGATGAGCTGGCGCGTGATGGCTGGCTGACTAAGACTGCCCGTAAGTCTGGTGGG
CGTGATCTGAGCAATGTTTACCAGATCAATGTCGATAAGCTGGAGGAGGCGGCAGCGGCGGCCCGCATGGCCAACAAGTC
CAAAAAGCGGGGTGGGCGCGTTACCCCCCCAATGATTGACCCCTCAAATATTGACCCCCCAACGGTTGAGGGGTTAACGG
TTGACCCCCCAAATATTGACCCCCCAATCGTTGAGGGGTCAACCATTGGTAAAAACACCCCCGTTAAGGGGTCAATGGTT
GACCCCGATCCGTCAGTTAAAACAGATCCGTCAGTAAAAAGATCTTCTTGTCCGGACGCTGCGCAACCGGACGAGTCTGA
CCGCGATCATGAATTTTTGGCCCGTCATCCGGATGCGGTGGTGTTCAGTGCCAAAAAGCGCCTGTGGGGCGGGCAGGAGG
ATCTGACCTGCGCCGAATGGATATGGGGGCGCATCCTTCGACTGCACGAACAAGCCGCTGAATACGATGGGGAGATGGTC
AGGCCCAAGGCACCCAACTGGATAGCCTGGGCTAACGAGGTGCGCCTGATGTGCGAGCTGGATGGGCGCACTCACCGGCA
GATTTGCGAGCTGTTTGGCCGGGTAAACCGTGATCCGTTCTGGTGCCGCAATGTCCTGAGCCCGGCGAAGTTGCGTGAGA
AATGGGATGAGCTGGTGATCCGTCTGGGGGCACCGGAAGCGGGTGTTCAGGATCGCTCACTGAAAACCCTGCTGGGGGCG
GAGTGGAACACGGCGCAGGGATGGGAGGACGTGCTATGA

Upstream 100 bases:

>100_bases
CAGTCTCCCTTGGCTCATAGCCTGCATGACTACATCAACGATGGTCTTTTCGCCTCAGCGCTTGTCGATCGTTCGCTGAA
CAGCAACAAGGAGGTATGCC

Downstream 100 bases:

>100_bases
AAAATCTGGTTTCTGCCGTACAGCGCCGGGATGCAGCCGCACTGTCCCGCATGGCTGGTCAGCCCCTGCAGGCGCGGGTG
GTGAACGGCAACGCTGAAAA

Product: phage O protein family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 331

Protein sequence:

>332_residues
MSSKLHGLVWEGCAHAGLILSRVAVMARLADYSNDEGLSWPAVETIQRQIGARSKTTVSAAIDELARDGWLTKTARKSGG
RDLSNVYQINVDKLEEAAAAARMANKSKKRGGRVTPPMIDPSNIDPPTVEGLTVDPPNIDPPIVEGSTIGKNTPVKGSMV
DPDPSVKTDPSVKRSSCPDAAQPDESDRDHEFLARHPDAVVFSAKKRLWGGQEDLTCAEWIWGRILRLHEQAAEYDGEMV
RPKAPNWIAWANEVRLMCELDGRTHRQICELFGRVNRDPFWCRNVLSPAKLREKWDELVIRLGAPEAGVQDRSLKTLLGA
EWNTAQGWEDVL

Sequences:

>Translated_332_residues
MSSKLHGLVWEGCAHAGLILSRVAVMARLADYSNDEGLSWPAVETIQRQIGARSKTTVSAAIDELARDGWLTKTARKSGG
RDLSNVYQINVDKLEEAAAAARMANKSKKRGGRVTPPMIDPSNIDPPTVEGLTVDPPNIDPPIVEGSTIGKNTPVKGSMV
DPDPSVKTDPSVKRSSCPDAAQPDESDRDHEFLARHPDAVVFSAKKRLWGGQEDLTCAEWIWGRILRLHEQAAEYDGEMV
RPKAPNWIAWANEVRLMCELDGRTHRQICELFGRVNRDPFWCRNVLSPAKLREKWDELVIRLGAPEAGVQDRSLKTLLGA
EWNTAQGWEDVL
>Mature_331_residues
SSKLHGLVWEGCAHAGLILSRVAVMARLADYSNDEGLSWPAVETIQRQIGARSKTTVSAAIDELARDGWLTKTARKSGGR
DLSNVYQINVDKLEEAAAAARMANKSKKRGGRVTPPMIDPSNIDPPTVEGLTVDPPNIDPPIVEGSTIGKNTPVKGSMVD
PDPSVKTDPSVKRSSCPDAAQPDESDRDHEFLARHPDAVVFSAKKRLWGGQEDLTCAEWIWGRILRLHEQAAEYDGEMVR
PKAPNWIAWANEVRLMCELDGRTHRQICELFGRVNRDPFWCRNVLSPAKLREKWDELVIRLGAPEAGVQDRSLKTLLGAE
WNTAQGWEDVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage O protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36757; Mature: 36626

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSKLHGLVWEGCAHAGLILSRVAVMARLADYSNDEGLSWPAVETIQRQIGARSKTTVSA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHH
AIDELARDGWLTKTARKSGGRDLSNVYQINVDKLEEAAAAARMANKSKKRGGRVTPPMID
HHHHHHHCCCHHHHHHHCCCCCCHHHEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PSNIDPPTVEGLTVDPPNIDPPIVEGSTIGKNTPVKGSMVDPDPSVKTDPSVKRSSCPDA
CCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AQPDESDRDHEFLARHPDAVVFSAKKRLWGGQEDLTCAEWIWGRILRLHEQAAEYDGEMV
CCCCCCCCCHHHHHHCCCCEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEE
RPKAPNWIAWANEVRLMCELDGRTHRQICELFGRVNRDPFWCRNVLSPAKLREKWDELVI
CCCCCCCEEECCCEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHE
RLGAPEAGVQDRSLKTLLGAEWNTAQGWEDVL
ECCCCCCCCCHHHHHHHHCCCCCCCCCHHHCC
>Mature Secondary Structure 
SSKLHGLVWEGCAHAGLILSRVAVMARLADYSNDEGLSWPAVETIQRQIGARSKTTVSA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHH
AIDELARDGWLTKTARKSGGRDLSNVYQINVDKLEEAAAAARMANKSKKRGGRVTPPMID
HHHHHHHCCCHHHHHHHCCCCCCHHHEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PSNIDPPTVEGLTVDPPNIDPPIVEGSTIGKNTPVKGSMVDPDPSVKTDPSVKRSSCPDA
CCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AQPDESDRDHEFLARHPDAVVFSAKKRLWGGQEDLTCAEWIWGRILRLHEQAAEYDGEMV
CCCCCCCCCHHHHHHCCCCEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEE
RPKAPNWIAWANEVRLMCELDGRTHRQICELFGRVNRDPFWCRNVLSPAKLREKWDELVI
CCCCCCCEEECCCEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHE
RLGAPEAGVQDRSLKTLLGAEWNTAQGWEDVL
ECCCCCCCCCHHHHHHHHCCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]