| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238920164
Identifier: 238920164
GI number: 238920164
Start: 2176643
End: 2177212
Strand: Direct
Name: 238920164
Synonym: NT01EI_2270
Alternate gene names: NA
Gene position: 2176643-2177212 (Clockwise)
Preceding gene: 238920163
Following gene: 238920165
Centisome position: 57.1
GC content: 57.02
Gene sequence:
>570_bases ATGAATCTGCCAAAACTGCCTGACATCGCCCTGCCCGGCTGGATGAGCCTGGGCGAGCCGCTGACGCTGGCACACGCCTC AAAACGCTACTGGGAGATAGTCTATGGCTGGCTGACATGGCCTCTGGCACAAATCGATGTGGACAGCTGTGCGGTACCAC TGCTTAACCTGCTGGCCTACCAGCGCAGCATCACCCGTTTTAACGGTGAACCGCTGAGGCTGTTCCGCCTGCGCGTAAAG CACGCCTTTATCAACGCCCAAGACGCCGGCGAGCAGCGCGGCTTTGAGCGTATTTTTCAGCGGTTGGAGATAGGTGACGT ACAAACGCTGCAACGCCAGTCACGGCTCGACTGGGATCAGATCATGCTGCGTATCAACGATCTCCAGCTCAGCGAGAACA ACGCGTTAATGATGAGCCTGGTGCGCCAGTATGGCCGAACCTGCCGCCGCTATTTTTTCCAGATCATCAATAACCGCACC CTGCATATCACCGGCGCAACCTTTGACGGCGACTACCGCTATTTACACGCCAAAATTCCCCGGGTCACCAATGAGGGCAC ACACCCATGA
Upstream 100 bases:
>100_bases AGCACTTTGCCGAAATCGAATCGGTCATACTCTCGCTGACAGATATCGAAAGCGGCCTGGCCGTGCCGCGCCTGCGTGCC CTGTCCATCGAGGTACCCGT
Downstream 100 bases:
>100_bases GCACTGTGATCACCCAACACTACCAGCAGTGGTGTGCCAGCCAGATGTCACATGACCTGCCTGCCCGCCCGGATACCGTC ATTTTTGCCTATATCCCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Phage-Like Protein; Bacteriophage Protein; Hemolysins-Like Protein Containing CBS Domains
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MNLPKLPDIALPGWMSLGEPLTLAHASKRYWEIVYGWLTWPLAQIDVDSCAVPLLNLLAYQRSITRFNGEPLRLFRLRVK HAFINAQDAGEQRGFERIFQRLEIGDVQTLQRQSRLDWDQIMLRINDLQLSENNALMMSLVRQYGRTCRRYFFQIINNRT LHITGATFDGDYRYLHAKIPRVTNEGTHP
Sequences:
>Translated_189_residues MNLPKLPDIALPGWMSLGEPLTLAHASKRYWEIVYGWLTWPLAQIDVDSCAVPLLNLLAYQRSITRFNGEPLRLFRLRVK HAFINAQDAGEQRGFERIFQRLEIGDVQTLQRQSRLDWDQIMLRINDLQLSENNALMMSLVRQYGRTCRRYFFQIINNRT LHITGATFDGDYRYLHAKIPRVTNEGTHP >Mature_189_residues MNLPKLPDIALPGWMSLGEPLTLAHASKRYWEIVYGWLTWPLAQIDVDSCAVPLLNLLAYQRSITRFNGEPLRLFRLRVK HAFINAQDAGEQRGFERIFQRLEIGDVQTLQRQSRLDWDQIMLRINDLQLSENNALMMSLVRQYGRTCRRYFFQIINNRT LHITGATFDGDYRYLHAKIPRVTNEGTHP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22129; Mature: 22129
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLPKLPDIALPGWMSLGEPLTLAHASKRYWEIVYGWLTWPLAQIDVDSCAVPLLNLLAY CCCCCCCCCCCCCCHHCCCCEEHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHH QRSITRFNGEPLRLFRLRVKHAFINAQDAGEQRGFERIFQRLEIGDVQTLQRQSRLDWDQ HHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHH IMLRINDLQLSENNALMMSLVRQYGRTCRRYFFQIINNRTLHITGATFDGDYRYLHAKIP HHHHHHCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEECCCEEEEEEECC RVTNEGTHP CCCCCCCCC >Mature Secondary Structure MNLPKLPDIALPGWMSLGEPLTLAHASKRYWEIVYGWLTWPLAQIDVDSCAVPLLNLLAY CCCCCCCCCCCCCCHHCCCCEEHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHH QRSITRFNGEPLRLFRLRVKHAFINAQDAGEQRGFERIFQRLEIGDVQTLQRQSRLDWDQ HHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHH IMLRINDLQLSENNALMMSLVRQYGRTCRRYFFQIINNRTLHITGATFDGDYRYLHAKIP HHHHHHCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEECCCEEEEEEECC RVTNEGTHP CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA