Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238920164

Identifier: 238920164

GI number: 238920164

Start: 2176643

End: 2177212

Strand: Direct

Name: 238920164

Synonym: NT01EI_2270

Alternate gene names: NA

Gene position: 2176643-2177212 (Clockwise)

Preceding gene: 238920163

Following gene: 238920165

Centisome position: 57.1

GC content: 57.02

Gene sequence:

>570_bases
ATGAATCTGCCAAAACTGCCTGACATCGCCCTGCCCGGCTGGATGAGCCTGGGCGAGCCGCTGACGCTGGCACACGCCTC
AAAACGCTACTGGGAGATAGTCTATGGCTGGCTGACATGGCCTCTGGCACAAATCGATGTGGACAGCTGTGCGGTACCAC
TGCTTAACCTGCTGGCCTACCAGCGCAGCATCACCCGTTTTAACGGTGAACCGCTGAGGCTGTTCCGCCTGCGCGTAAAG
CACGCCTTTATCAACGCCCAAGACGCCGGCGAGCAGCGCGGCTTTGAGCGTATTTTTCAGCGGTTGGAGATAGGTGACGT
ACAAACGCTGCAACGCCAGTCACGGCTCGACTGGGATCAGATCATGCTGCGTATCAACGATCTCCAGCTCAGCGAGAACA
ACGCGTTAATGATGAGCCTGGTGCGCCAGTATGGCCGAACCTGCCGCCGCTATTTTTTCCAGATCATCAATAACCGCACC
CTGCATATCACCGGCGCAACCTTTGACGGCGACTACCGCTATTTACACGCCAAAATTCCCCGGGTCACCAATGAGGGCAC
ACACCCATGA

Upstream 100 bases:

>100_bases
AGCACTTTGCCGAAATCGAATCGGTCATACTCTCGCTGACAGATATCGAAAGCGGCCTGGCCGTGCCGCGCCTGCGTGCC
CTGTCCATCGAGGTACCCGT

Downstream 100 bases:

>100_bases
GCACTGTGATCACCCAACACTACCAGCAGTGGTGTGCCAGCCAGATGTCACATGACCTGCCTGCCCGCCCGGATACCGTC
ATTTTTGCCTATATCCCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Phage-Like Protein; Bacteriophage Protein; Hemolysins-Like Protein Containing CBS Domains

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MNLPKLPDIALPGWMSLGEPLTLAHASKRYWEIVYGWLTWPLAQIDVDSCAVPLLNLLAYQRSITRFNGEPLRLFRLRVK
HAFINAQDAGEQRGFERIFQRLEIGDVQTLQRQSRLDWDQIMLRINDLQLSENNALMMSLVRQYGRTCRRYFFQIINNRT
LHITGATFDGDYRYLHAKIPRVTNEGTHP

Sequences:

>Translated_189_residues
MNLPKLPDIALPGWMSLGEPLTLAHASKRYWEIVYGWLTWPLAQIDVDSCAVPLLNLLAYQRSITRFNGEPLRLFRLRVK
HAFINAQDAGEQRGFERIFQRLEIGDVQTLQRQSRLDWDQIMLRINDLQLSENNALMMSLVRQYGRTCRRYFFQIINNRT
LHITGATFDGDYRYLHAKIPRVTNEGTHP
>Mature_189_residues
MNLPKLPDIALPGWMSLGEPLTLAHASKRYWEIVYGWLTWPLAQIDVDSCAVPLLNLLAYQRSITRFNGEPLRLFRLRVK
HAFINAQDAGEQRGFERIFQRLEIGDVQTLQRQSRLDWDQIMLRINDLQLSENNALMMSLVRQYGRTCRRYFFQIINNRT
LHITGATFDGDYRYLHAKIPRVTNEGTHP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22129; Mature: 22129

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLPKLPDIALPGWMSLGEPLTLAHASKRYWEIVYGWLTWPLAQIDVDSCAVPLLNLLAY
CCCCCCCCCCCCCCHHCCCCEEHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHH
QRSITRFNGEPLRLFRLRVKHAFINAQDAGEQRGFERIFQRLEIGDVQTLQRQSRLDWDQ
HHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHH
IMLRINDLQLSENNALMMSLVRQYGRTCRRYFFQIINNRTLHITGATFDGDYRYLHAKIP
HHHHHHCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEECCCEEEEEEECC
RVTNEGTHP
CCCCCCCCC
>Mature Secondary Structure
MNLPKLPDIALPGWMSLGEPLTLAHASKRYWEIVYGWLTWPLAQIDVDSCAVPLLNLLAY
CCCCCCCCCCCCCCHHCCCCEEHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHH
QRSITRFNGEPLRLFRLRVKHAFINAQDAGEQRGFERIFQRLEIGDVQTLQRQSRLDWDQ
HHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHH
IMLRINDLQLSENNALMMSLVRQYGRTCRRYFFQIINNRTLHITGATFDGDYRYLHAKIP
HHHHHHCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEECCCEEEEEEECC
RVTNEGTHP
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA