Click here to switch to the map view.

The map label for this gene is stfE [H]

Identifier: 238920165

GI number: 238920165

Start: 2177209

End: 2178990

Strand: Direct

Name: stfE [H]

Synonym: NT01EI_2271

Alternate gene names: 238920165

Gene position: 2177209-2178990 (Clockwise)

Preceding gene: 238920164

Following gene: 238920166

Centisome position: 57.11

GC content: 57.18

Gene sequence:

>1782_bases
ATGAGCACTGTGATCACCCAACACTACCAGCAGTGGTGTGCCAGCCAGATGTCACATGACCTGCCTGCCCGCCCGGATAC
CGTCATTTTTGCCTATATCCCCGGGCAAGACGAAAATGCAGAGATAGACCACACCGAGCCGTTGCCAGCGGATACGTTCA
TCCGCCACCGTATGCCCGTAATGCAATACGGACTGCTCAACCCGAACGTCGTGGCATTCTCCGTTATCCTGGACACCACC
GTAGGCAATTTTGACTATAACTGGATAGGTCTGCTGCACGCAGAGAGCAACACCCTGTGCATGATCTCCCACGTTCCCCG
TCAGCAAAAAATCAAAACCGCAGACGGTATACAGGGCAATAACCTGACGCGCACTTTCGCCATGGAGTTCGACGGTGCCG
CCGCCGCCATGCAGGTGACCGTTACCGCAGAGGTTTGGCAGATAGATTTCACCGCCCGCCTGGCTGGCATGGATGAGATC
CGCCGCCTGATAGCCCGTGACCATTACGGACCCGCGGCCTTTCTGGACGATGGCTGGCGCGTCACGCCGCAAGAGGGGGC
AGCGCACATCGCGCCAGGCATCGGCTACGTTCAGGGGCTGCGTGTGGTGCTACCCTCGGCCACCACATTGCCCGTGCAAC
CCGGACAGACAATCTGGCTTGATGCCAGCTGGCAAGGCACCGCGACCGGTGCCTGGCAGACCGCTATCCAACTGTTCGCC
GATAACAGGCAGGCCATTGATGACTACACCGACGCGGCGGGGTTTTGTCACTACCTGGCCCCACTGGCCACCGTTGCGAC
GGATGGTGCCACTGACCTGCGCCCTGCTACGCCGGGCGATCGGCAGCAAGATGCACTCAGAGCCCATGAGGCATCACGCA
ACCACCCTACTGCCACCTTAGATGAAGTAGGTTTCGTACGCCTTAACGACAGCACCGACAGCGACAGCACCACCCAGGCA
GCGACGCCCAATGCGGTAAAGCGTACTTATGAGGAGGCCACCCGCGCCGCCAGCACCAGCCAGGCCGGACAGGTCCTGCT
TGAAGACAGTATCAGCAGCTACAGCACCACAAATGCAGCGACGGCCAATGCAGTAAGGTACGCCTATGAGAATGCAGTGC
GTCCCGCGACTACCAGCCAGGCCGGACAGGTCCTGCTTGAAGACAGCGTCAGCAGCACCAGCACCACAAATGCGCCGACG
TCCTCTGCGTTAAAACGCACCTATGACAGGGCGAACAGTGCCTATGACAGGGCGAACAGTGCCTATGACAGGGCGAGCAG
TGCCTATAGTTACGCCGGCTCAATCTACGATAAGGCCTATGATGCATATGACATTGCCCGTCGGGCACCCCCAGTAGGCA
CACCTCAACCCTGGCCCAACACCTCCATTCCATCGGGGTGGATCAAATGTGCGGGGCAATCGTTCTCAACCTCAAGCTAT
CCCGAGCTGGCAAAAGCCTATCCCAATGGCCGATTGCCTGATTTACGCGGCGAGTTTATCCGTGGGTATGATGATTACGG
TGGTACTGACAGCCAGCGACAGATATTAAGCTGGCAGGGTGATGCAATGCGAAATATCACGGGGACTTTTGGTGTTGATG
ATCAGACGATAGAACAAGTAACAGGTGTCTTTAGGGAATATGGGAGGTTCAGCTACGACGCTCGTTCTGAAAGAAACGGC
GCGGGACGTATTATTTACTTTGATGCATCCCAGGTAGTGCCGACGGCAAATGAAAACCGACCACGTAATATCGCATTTCT
GTACATCGTGAGGGCACAATAA

Upstream 100 bases:

>100_bases
TCAATAACCGCACCCTGCATATCACCGGCGCAACCTTTGACGGCGACTACCGCTATTTACACGCCAAAATTCCCCGGGTC
ACCAATGAGGGCACACACCC

Downstream 100 bases:

>100_bases
TGAAATATCCCTTAACTCCTGAAGTTGCCGAACTTGGCAAAAACCGACTGGCTAAAAAAGCAGGCTGGCTGACGGTATAT
CATACGGATGAAGCAACCGG

Product: tail fiber

Products: NA

Alternate protein names: Side tail fiber protein homolog from lambdoid prophage e14 [H]

Number of amino acids: Translated: 593; Mature: 592

Protein sequence:

>593_residues
MSTVITQHYQQWCASQMSHDLPARPDTVIFAYIPGQDENAEIDHTEPLPADTFIRHRMPVMQYGLLNPNVVAFSVILDTT
VGNFDYNWIGLLHAESNTLCMISHVPRQQKIKTADGIQGNNLTRTFAMEFDGAAAAMQVTVTAEVWQIDFTARLAGMDEI
RRLIARDHYGPAAFLDDGWRVTPQEGAAHIAPGIGYVQGLRVVLPSATTLPVQPGQTIWLDASWQGTATGAWQTAIQLFA
DNRQAIDDYTDAAGFCHYLAPLATVATDGATDLRPATPGDRQQDALRAHEASRNHPTATLDEVGFVRLNDSTDSDSTTQA
ATPNAVKRTYEEATRAASTSQAGQVLLEDSISSYSTTNAATANAVRYAYENAVRPATTSQAGQVLLEDSVSSTSTTNAPT
SSALKRTYDRANSAYDRANSAYDRASSAYSYAGSIYDKAYDAYDIARRAPPVGTPQPWPNTSIPSGWIKCAGQSFSTSSY
PELAKAYPNGRLPDLRGEFIRGYDDYGGTDSQRQILSWQGDAMRNITGTFGVDDQTIEQVTGVFREYGRFSYDARSERNG
AGRIIYFDASQVVPTANENRPRNIAFLYIVRAQ

Sequences:

>Translated_593_residues
MSTVITQHYQQWCASQMSHDLPARPDTVIFAYIPGQDENAEIDHTEPLPADTFIRHRMPVMQYGLLNPNVVAFSVILDTT
VGNFDYNWIGLLHAESNTLCMISHVPRQQKIKTADGIQGNNLTRTFAMEFDGAAAAMQVTVTAEVWQIDFTARLAGMDEI
RRLIARDHYGPAAFLDDGWRVTPQEGAAHIAPGIGYVQGLRVVLPSATTLPVQPGQTIWLDASWQGTATGAWQTAIQLFA
DNRQAIDDYTDAAGFCHYLAPLATVATDGATDLRPATPGDRQQDALRAHEASRNHPTATLDEVGFVRLNDSTDSDSTTQA
ATPNAVKRTYEEATRAASTSQAGQVLLEDSISSYSTTNAATANAVRYAYENAVRPATTSQAGQVLLEDSVSSTSTTNAPT
SSALKRTYDRANSAYDRANSAYDRASSAYSYAGSIYDKAYDAYDIARRAPPVGTPQPWPNTSIPSGWIKCAGQSFSTSSY
PELAKAYPNGRLPDLRGEFIRGYDDYGGTDSQRQILSWQGDAMRNITGTFGVDDQTIEQVTGVFREYGRFSYDARSERNG
AGRIIYFDASQVVPTANENRPRNIAFLYIVRAQ
>Mature_592_residues
STVITQHYQQWCASQMSHDLPARPDTVIFAYIPGQDENAEIDHTEPLPADTFIRHRMPVMQYGLLNPNVVAFSVILDTTV
GNFDYNWIGLLHAESNTLCMISHVPRQQKIKTADGIQGNNLTRTFAMEFDGAAAAMQVTVTAEVWQIDFTARLAGMDEIR
RLIARDHYGPAAFLDDGWRVTPQEGAAHIAPGIGYVQGLRVVLPSATTLPVQPGQTIWLDASWQGTATGAWQTAIQLFAD
NRQAIDDYTDAAGFCHYLAPLATVATDGATDLRPATPGDRQQDALRAHEASRNHPTATLDEVGFVRLNDSTDSDSTTQAA
TPNAVKRTYEEATRAASTSQAGQVLLEDSISSYSTTNAATANAVRYAYENAVRPATTSQAGQVLLEDSVSSTSTTNAPTS
SALKRTYDRANSAYDRANSAYDRASSAYSYAGSIYDKAYDAYDIARRAPPVGTPQPWPNTSIPSGWIKCAGQSFSTSSYP
ELAKAYPNGRLPDLRGEFIRGYDDYGGTDSQRQILSWQGDAMRNITGTFGVDDQTIEQVTGVFREYGRFSYDARSERNGA
GRIIYFDASQVVPTANENRPRNIAFLYIVRAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tail fiber family [H]

Homologues:

Organism=Escherichia coli, GI87081892, Length=87, Percent_Identity=39.0804597701149, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1787829, Length=74, Percent_Identity=44.5945945945946, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011083 [H]

Pfam domain/function: PF07484 Collar [H]

EC number: NA

Molecular weight: Translated: 64866; Mature: 64735

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTVITQHYQQWCASQMSHDLPARPDTVIFAYIPGQDENAEIDHTEPLPADTFIRHRMPV
CCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCH
MQYGLLNPNVVAFSVILDTTVGNFDYNWIGLLHAESNTLCMISHVPRQQKIKTADGIQGN
HHHCCCCCCCEEEEEEEECCCCCCCCEEEEEEEECCCCEEEEECCCCHHHCCCCCCCCCC
NLTRTFAMEFDGAAAAMQVTVTAEVWQIDFTARLAGMDEIRRLIARDHYGPAAFLDDGWR
CCEEEEEEEECCCCEEEEEEEEEEEEEEEHHHHHCCHHHHHHHHHHCCCCCEEEECCCCE
VTPQEGAAHIAPGIGYVQGLRVVLPSATTLPVQPGQTIWLDASWQGTATGAWQTAIQLFA
ECCCCCCCHHCCCHHHHHCHHEEECCCEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHH
DNRQAIDDYTDAAGFCHYLAPLATVATDGATDLRPATPGDRQQDALRAHEASRNHPTATL
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
DEVGFVRLNDSTDSDSTTQAATPNAVKRTYEEATRAASTSQAGQVLLEDSISSYSTTNAA
CCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCHHHHHHCCCCCCCCCCH
TANAVRYAYENAVRPATTSQAGQVLLEDSVSSTSTTNAPTSSALKRTYDRANSAYDRANS
HHHHHHHHHHHCCCCCCCCHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AYDRASSAYSYAGSIYDKAYDAYDIARRAPPVGTPQPWPNTSIPSGWIKCAGQSFSTSSY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC
PELAKAYPNGRLPDLRGEFIRGYDDYGGTDSQRQILSWQGDAMRNITGTFGVDDQTIEQV
HHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCHHHHHHH
TGVFREYGRFSYDARSERNGAGRIIYFDASQVVPTANENRPRNIAFLYIVRAQ
HHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure 
STVITQHYQQWCASQMSHDLPARPDTVIFAYIPGQDENAEIDHTEPLPADTFIRHRMPV
CCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCH
MQYGLLNPNVVAFSVILDTTVGNFDYNWIGLLHAESNTLCMISHVPRQQKIKTADGIQGN
HHHCCCCCCCEEEEEEEECCCCCCCCEEEEEEEECCCCEEEEECCCCHHHCCCCCCCCCC
NLTRTFAMEFDGAAAAMQVTVTAEVWQIDFTARLAGMDEIRRLIARDHYGPAAFLDDGWR
CCEEEEEEEECCCCEEEEEEEEEEEEEEEHHHHHCCHHHHHHHHHHCCCCCEEEECCCCE
VTPQEGAAHIAPGIGYVQGLRVVLPSATTLPVQPGQTIWLDASWQGTATGAWQTAIQLFA
ECCCCCCCHHCCCHHHHHCHHEEECCCEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHH
DNRQAIDDYTDAAGFCHYLAPLATVATDGATDLRPATPGDRQQDALRAHEASRNHPTATL
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
DEVGFVRLNDSTDSDSTTQAATPNAVKRTYEEATRAASTSQAGQVLLEDSISSYSTTNAA
CCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCHHHHHHCCCCCCCCCCH
TANAVRYAYENAVRPATTSQAGQVLLEDSVSSTSTTNAPTSSALKRTYDRANSAYDRANS
HHHHHHHHHHHCCCCCCCCHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AYDRASSAYSYAGSIYDKAYDAYDIARRAPPVGTPQPWPNTSIPSGWIKCAGQSFSTSSY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC
PELAKAYPNGRLPDLRGEFIRGYDDYGGTDSQRQILSWQGDAMRNITGTFGVDDQTIEQV
HHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCHHHHHHH
TGVFREYGRFSYDARSERNGAGRIIYFDASQVVPTANENRPRNIAFLYIVRAQ
HHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3894006; 8905232; 9278503 [H]