| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238920163
Identifier: 238920163
GI number: 238920163
Start: 2175462
End: 2176646
Strand: Direct
Name: 238920163
Synonym: NT01EI_2269
Alternate gene names: NA
Gene position: 2175462-2176646 (Clockwise)
Preceding gene: 238920162
Following gene: 238920164
Centisome position: 57.06
GC content: 61.27
Gene sequence:
>1185_bases ATGATTAATGGCAAGCCGAAGGTCGATTACGAGAAAATTTTGGCGGAGCAGGGCATGCCCACCACTCCCGCGCAGGCGCG AGCCCGGTTTGACGCCATCGTCAAAGCAGAGGGGTTGATCACCAATGCGTCGCGCATGTCGCCCTTCTGGAAGTTGATCA CCGCCATCGTCACAACGCCGGTGATGTGGCTCAAGGATGCGCTGGTCAACGTGGTGATGAAAAACCTGTTTTTGGCGACA GCCAGCGGCGTCTTCGTCGATATCATGGCCTGGGCGGTCAACCTGCCCCGTAAGCCTGCCACTGCCGCCCGGGGGGTCAT CCTGTTTACCAAGGCCGATGCCGCCCGGCTCATCACCGTACCTGCTGGCACCCAGATCCAGACAGAGCGCATCAATGGCG TCATCTACTCGCTGACCACCACCGCCGACGCCGTCATTCCGGAAGGGGTAGCGCAGCTGCGCCTGAAGGTCACCGCTGAC GCTCCCGGTGCCGGTTTCAATCTGGCCCCGGGCTATTACCGCATTCTGCCTACCGCCATCGACGGTATCGAGCGCGTCGA AAACCCCGAGGACTGGCTGCTCTCCCCCGGTGCCGATGCCGAGCGCGACGATGAGCTGCGCGATCGGGTGCGCAATCAGT TCAATCTGGCCGGTGCCTACCACACCGATGCCGTATACCGTGGCCTGATCTCCAGCGTTGCCGGTATCAGCGCCGAGCGC ATCTACTTTGTACACGACGCGCCGCGCGGTCCGGGCACCGCCAACGCCTATATTCTGCTGGACAGCGGGATCCCCGCCCA GCCGTTCATCGACACCATCAATGACCATATCATGGACCGGGGGCATCACGGCCACGGCGACGATCTGCGTACATTCGCGA TGCCCGAAACACGCCACGACCTGACTGTTACCCTGTACCTCGATGCCAGCCTTGGGCTGACCGGACAGGCGATCGATGTA CTGCGGCGCGATGTCGGCAACCTGGTGCGCTGCGCGTTCCGTGAAAATACCGAATATGACGTACAGAAGACCTGGCCCTA CAGCCGCTTTAGCATGTCGCGTCTGAGTGAGGAGATTCACCAGCACTTTGCCGAAATCGAATCGGTCATACTCTCGCTGA CAGATATCGAAAGCGGCCTGGCCGTGCCGCGCCTGCGTGCCCTGTCCATCGAGGTACCCGTATGA
Upstream 100 bases:
>100_bases GTCAGCGTAACCGAAGAGACGCCGCTTTCCGGCCGGCTGCTTATCCTGGCCGCAACCGAAGATTTTCGCCATGAACCGCT GAGATTTGAGGTGACACTGA
Downstream 100 bases:
>100_bases ATCTGCCAAAACTGCCTGACATCGCCCTGCCCGGCTGGATGAGCCTGGGCGAGCCGCTGACGCTGGCACACGCCTCAAAA CGCTACTGGGAGATAGTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: Bacteriophage Protein; Baseplate J Family Protein; Phage Gene; Baseplate Assembly Protein; NAD Synthase; Phage-Like Protein; Phage Protein
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MINGKPKVDYEKILAEQGMPTTPAQARARFDAIVKAEGLITNASRMSPFWKLITAIVTTPVMWLKDALVNVVMKNLFLAT ASGVFVDIMAWAVNLPRKPATAARGVILFTKADAARLITVPAGTQIQTERINGVIYSLTTTADAVIPEGVAQLRLKVTAD APGAGFNLAPGYYRILPTAIDGIERVENPEDWLLSPGADAERDDELRDRVRNQFNLAGAYHTDAVYRGLISSVAGISAER IYFVHDAPRGPGTANAYILLDSGIPAQPFIDTINDHIMDRGHHGHGDDLRTFAMPETRHDLTVTLYLDASLGLTGQAIDV LRRDVGNLVRCAFRENTEYDVQKTWPYSRFSMSRLSEEIHQHFAEIESVILSLTDIESGLAVPRLRALSIEVPV
Sequences:
>Translated_394_residues MINGKPKVDYEKILAEQGMPTTPAQARARFDAIVKAEGLITNASRMSPFWKLITAIVTTPVMWLKDALVNVVMKNLFLAT ASGVFVDIMAWAVNLPRKPATAARGVILFTKADAARLITVPAGTQIQTERINGVIYSLTTTADAVIPEGVAQLRLKVTAD APGAGFNLAPGYYRILPTAIDGIERVENPEDWLLSPGADAERDDELRDRVRNQFNLAGAYHTDAVYRGLISSVAGISAER IYFVHDAPRGPGTANAYILLDSGIPAQPFIDTINDHIMDRGHHGHGDDLRTFAMPETRHDLTVTLYLDASLGLTGQAIDV LRRDVGNLVRCAFRENTEYDVQKTWPYSRFSMSRLSEEIHQHFAEIESVILSLTDIESGLAVPRLRALSIEVPV >Mature_394_residues MINGKPKVDYEKILAEQGMPTTPAQARARFDAIVKAEGLITNASRMSPFWKLITAIVTTPVMWLKDALVNVVMKNLFLAT ASGVFVDIMAWAVNLPRKPATAARGVILFTKADAARLITVPAGTQIQTERINGVIYSLTTTADAVIPEGVAQLRLKVTAD APGAGFNLAPGYYRILPTAIDGIERVENPEDWLLSPGADAERDDELRDRVRNQFNLAGAYHTDAVYRGLISSVAGISAER IYFVHDAPRGPGTANAYILLDSGIPAQPFIDTINDHIMDRGHHGHGDDLRTFAMPETRHDLTVTLYLDASLGLTGQAIDV LRRDVGNLVRCAFRENTEYDVQKTWPYSRFSMSRLSEEIHQHFAEIESVILSLTDIESGLAVPRLRALSIEVPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43258; Mature: 43258
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINGKPKVDYEKILAEQGMPTTPAQARARFDAIVKAEGLITNASRMSPFWKLITAIVTTP CCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEECHHHCCHHHHHHHHHHHHH VMWLKDALVNVVMKNLFLATASGVFVDIMAWAVNLPRKPATAARGVILFTKADAARLITV HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHCCEEEEEECCCEEEEEE PAGTQIQTERINGVIYSLTTTADAVIPEGVAQLRLKVTADAPGAGFNLAPGYYRILPTAI CCCCEEEHHHHCEEEEEEECCHHHHHHCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHH DGIERVENPEDWLLSPGADAERDDELRDRVRNQFNLAGAYHTDAVYRGLISSVAGISAER HHHHHCCCCHHCEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCE IYFVHDAPRGPGTANAYILLDSGIPAQPFIDTINDHIMDRGHHGHGDDLRTFAMPETRHD EEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCC LTVTLYLDASLGLTGQAIDVLRRDVGNLVRCAFRENTEYDVQKTWPYSRFSMSRLSEEIH EEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH QHFAEIESVILSLTDIESGLAVPRLRALSIEVPV HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC >Mature Secondary Structure MINGKPKVDYEKILAEQGMPTTPAQARARFDAIVKAEGLITNASRMSPFWKLITAIVTTP CCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEECHHHCCHHHHHHHHHHHHH VMWLKDALVNVVMKNLFLATASGVFVDIMAWAVNLPRKPATAARGVILFTKADAARLITV HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHCCEEEEEECCCEEEEEE PAGTQIQTERINGVIYSLTTTADAVIPEGVAQLRLKVTADAPGAGFNLAPGYYRILPTAI CCCCEEEHHHHCEEEEEEECCHHHHHHCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHH DGIERVENPEDWLLSPGADAERDDELRDRVRNQFNLAGAYHTDAVYRGLISSVAGISAER HHHHHCCCCHHCEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCE IYFVHDAPRGPGTANAYILLDSGIPAQPFIDTINDHIMDRGHHGHGDDLRTFAMPETRHD EEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCC LTVTLYLDASLGLTGQAIDVLRRDVGNLVRCAFRENTEYDVQKTWPYSRFSMSRLSEEIH EEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH QHFAEIESVILSLTDIESGLAVPRLRALSIEVPV HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA