| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is cusC [H]
Identifier: 238920015
GI number: 238920015
Start: 2040731
End: 2042113
Strand: Reverse
Name: cusC [H]
Synonym: NT01EI_2119
Alternate gene names: 238920015
Gene position: 2042113-2040731 (Counterclockwise)
Preceding gene: 238920018
Following gene: 238920014
Centisome position: 53.57
GC content: 61.32
Gene sequence:
>1383_bases ATGGTTAAGATAAAGCAATTAAGCGTCAGCATGGTATTGACCCTGACGGGATGTGTCTCTCTGGCGCCAGAGTATCAGCG CCCGGCATTGCCGGTAGGTGCGCAGTTCTCCTCCGCGGCGGCAGCAGGCGACACGGCGTCGACGTACGACCGGGATCAGG GCTGGCGCCAGTTCTTTCGCGATGCGCAGGCCAGGTCGCTGATCGACGAGGCGCTGCTCAATAACCGCGACCTGCAGCAG GCGGTGCTCAATGTGCGTCTGGCGCGCGCCCAGCTGGCGCTGCAGCAGGCCGACCGTTACCCCCAGCTCGACGCCACCTC GCAGGCAAACTACCGTGCTCCGCTCCAGGGGGGAGCCAGTAACCGGGAGTATCAATTGGGTGGTGCGCTGGGATTCGATC TGGATCTGTTCGGCCGGCTCCAGTCGATGAGTGCGCGGGAGCAGCAGAATTTTCTCGCCAGTCAGCAGGCGCAGCGTGCG GTGCATATTCTGTTGGTCTCCAATGTCGCCCAGGCCTATTTTACCCAACAACTGGCCTATGCCCAGCGACGTATCGCCCA AGAGACGCTGCAAAACTATCGTCAATCCTATTCCCTGATCGAGCAGCAGGTTCGGGCCGGCAGTAATAATCTGCTGGCAT TAGAGCAGGCGCGCGGGCAGCTCGATACGACCCAGGCGACGCTGGCGCGGCGTGAAGGTGAGGTGGCGCAGGCCAACCAT GCCATTCAGCGACTCGTCGGTGTCTATGGCGGTACCCCCCGCGATCTGCGCGGGCTGGAGAGCCCGGTTGGCCCGGTAGC GCTGCCGGTGCCGCTGCCATCGACGATCCTGCTGCAACGTCCCGACATTATGGAGGCGGAGCATCTGCTGCAAGCAGCGG ATGCCGATATCGGAGCCGCCCGGGCAGCATTCTTTCCCTCTATCTCGCTGAGCGGCGGCTTAAACAGCAGCGGCAGTGAT CTGGCCGGGCTATTCAGCGCGGCCGGTGGAATGTGGAGTTTTGTCCCCAAGGTTACCCTGCCGATCTTTAATGGCGGGCG TAACCGCGCCAATCTGCAGCTCGCCGAATTACGCCAGCAGCAGTCCGTCGTGAATTATGAAAATAAGATCCAGGCCGCGT TTAAGGAGGTGGACGATGCCCTCTCTGCGCGTCGGAGCCTCGCCGATCAATTAACGGCGCAGCAGCGTTATCTCGATGCG ATCCAGGCAACCTTGGTGCGCGCCCGCGGCCTGTACGCCCACGGTGCGCTGAGTTATCTCGAGGTATTGGACGCAGAACG CGCGTTATTTACCACCCAACAGACGCTGCTCGATCTGCGTTATTCACAGCAGGCGAATGAAATAACCCTTTTCGCTGCCT TGGGCGGCGGTTGGCAGGCATAA
Upstream 100 bases:
>100_bases TCCTGTCACCGGGCAAACCGTATCGGTTTGTTAAGGTGCCATTATCCTTTGGCGGCCTTTAGGGTGCCACCCCCATCGGC ATGTTTGGGCTATCCGCGTT
Downstream 100 bases:
>100_bases CAACGGACCCTTAATCCAATGGAGTGAACTTTATGAAAACAGCGTTCAACGTGGTTTTATGTACAGCTTTCATCATGGCG GGCAGCGTCCCGGTGCTGGC
Product: copper/silver efflux system outer membrane protein CusC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 460; Mature: 460
Protein sequence:
>460_residues MVKIKQLSVSMVLTLTGCVSLAPEYQRPALPVGAQFSSAAAAGDTASTYDRDQGWRQFFRDAQARSLIDEALLNNRDLQQ AVLNVRLARAQLALQQADRYPQLDATSQANYRAPLQGGASNREYQLGGALGFDLDLFGRLQSMSAREQQNFLASQQAQRA VHILLVSNVAQAYFTQQLAYAQRRIAQETLQNYRQSYSLIEQQVRAGSNNLLALEQARGQLDTTQATLARREGEVAQANH AIQRLVGVYGGTPRDLRGLESPVGPVALPVPLPSTILLQRPDIMEAEHLLQAADADIGAARAAFFPSISLSGGLNSSGSD LAGLFSAAGGMWSFVPKVTLPIFNGGRNRANLQLAELRQQQSVVNYENKIQAAFKEVDDALSARRSLADQLTAQQRYLDA IQATLVRARGLYAHGALSYLEVLDAERALFTTQQTLLDLRYSQQANEITLFAALGGGWQA
Sequences:
>Translated_460_residues MVKIKQLSVSMVLTLTGCVSLAPEYQRPALPVGAQFSSAAAAGDTASTYDRDQGWRQFFRDAQARSLIDEALLNNRDLQQ AVLNVRLARAQLALQQADRYPQLDATSQANYRAPLQGGASNREYQLGGALGFDLDLFGRLQSMSAREQQNFLASQQAQRA VHILLVSNVAQAYFTQQLAYAQRRIAQETLQNYRQSYSLIEQQVRAGSNNLLALEQARGQLDTTQATLARREGEVAQANH AIQRLVGVYGGTPRDLRGLESPVGPVALPVPLPSTILLQRPDIMEAEHLLQAADADIGAARAAFFPSISLSGGLNSSGSD LAGLFSAAGGMWSFVPKVTLPIFNGGRNRANLQLAELRQQQSVVNYENKIQAAFKEVDDALSARRSLADQLTAQQRYLDA IQATLVRARGLYAHGALSYLEVLDAERALFTTQQTLLDLRYSQQANEITLFAALGGGWQA >Mature_460_residues MVKIKQLSVSMVLTLTGCVSLAPEYQRPALPVGAQFSSAAAAGDTASTYDRDQGWRQFFRDAQARSLIDEALLNNRDLQQ AVLNVRLARAQLALQQADRYPQLDATSQANYRAPLQGGASNREYQLGGALGFDLDLFGRLQSMSAREQQNFLASQQAQRA VHILLVSNVAQAYFTQQLAYAQRRIAQETLQNYRQSYSLIEQQVRAGSNNLLALEQARGQLDTTQATLARREGEVAQANH AIQRLVGVYGGTPRDLRGLESPVGPVALPVPLPSTILLQRPDIMEAEHLLQAADADIGAARAAFFPSISLSGGLNSSGSD LAGLFSAAGGMWSFVPKVTLPIFNGGRNRANLQLAELRQQQSVVNYENKIQAAFKEVDDALSARRSLADQLTAQQRYLDA IQATLVRARGLYAHGALSYLEVLDAERALFTTQQTLLDLRYSQQANEITLFAALGGGWQA
Specific function: Part of a cation efflux system that mediates resistance to copper and silver [H]
COG id: COG1538
COG function: function code MU; Outer membrane protein
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]
Homologues:
Organism=Escherichia coli, GI1786785, Length=458, Percent_Identity=59.6069868995633, Blast_Score=541, Evalue=1e-155, Organism=Escherichia coli, GI2367348, Length=438, Percent_Identity=24.8858447488584, Blast_Score=111, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003423 - InterPro: IPR010131 [H]
Pfam domain/function: PF02321 OEP [H]
EC number: NA
Molecular weight: Translated: 50148; Mature: 50148
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKIKQLSVSMVLTLTGCVSLAPEYQRPALPVGAQFSSAAAAGDTASTYDRDQGWRQFFR CCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCHHCCCHHHHHHHHH DAQARSLIDEALLNNRDLQQAVLNVRLARAQLALQQADRYPQLDATSQANYRAPLQGGAS HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC NREYQLGGALGFDLDLFGRLQSMSAREQQNFLASQQAQRAVHILLVSNVAQAYFTQQLAY CCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQRRIAQETLQNYRQSYSLIEQQVRAGSNNLLALEQARGQLDTTQATLARREGEVAQANH HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCCCHHHHHHHHHHCCCHHHHHH AIQRLVGVYGGTPRDLRGLESPVGPVALPVPLPSTILLQRPDIMEAEHLLQAADADIGAA HHHHHHHHHCCCCHHHHHCCCCCCCEEECCCCCCCEEECCCCHHHHHHHHHHHCCCCHHH RAAFFPSISLSGGLNSSGSDLAGLFSAAGGMWSFVPKVTLPIFNGGRNRANLQLAELRQQ HHHHCCCCEECCCCCCCCCHHHHHHHHCCCHHHHHCCEEEEEECCCCCCCCHHHHHHHHH QSVVNYENKIQAAFKEVDDALSARRSLADQLTAQQRYLDAIQATLVRARGLYAHGALSYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH EVLDAERALFTTQQTLLDLRYSQQANEITLFAALGGGWQA HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC >Mature Secondary Structure MVKIKQLSVSMVLTLTGCVSLAPEYQRPALPVGAQFSSAAAAGDTASTYDRDQGWRQFFR CCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCHHCCCHHHHHHHHH DAQARSLIDEALLNNRDLQQAVLNVRLARAQLALQQADRYPQLDATSQANYRAPLQGGAS HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC NREYQLGGALGFDLDLFGRLQSMSAREQQNFLASQQAQRAVHILLVSNVAQAYFTQQLAY CCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQRRIAQETLQNYRQSYSLIEQQVRAGSNNLLALEQARGQLDTTQATLARREGEVAQANH HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCCCHHHHHHHHHHCCCHHHHHH AIQRLVGVYGGTPRDLRGLESPVGPVALPVPLPSTILLQRPDIMEAEHLLQAADADIGAA HHHHHHHHHCCCCHHHHHCCCCCCCEEECCCCCCCEEECCCCHHHHHHHHHHHCCCCHHH RAAFFPSISLSGGLNSSGSDLAGLFSAAGGMWSFVPKVTLPIFNGGRNRANLQLAELRQQ HHHHCCCCEECCCCCCCCCHHHHHHHHCCCHHHHHCCEEEEEECCCCCCCCHHHHHHHHH QSVVNYENKIQAAFKEVDDALSARRSLADQLTAQQRYLDAIQATLVRARGLYAHGALSYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH EVLDAERALFTTQQTLLDLRYSQQANEITLFAALGGGWQA HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]