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The map label for this gene is pcp [H]

Identifier: 238919996

GI number: 238919996

Start: 2022133

End: 2022600

Strand: Direct

Name: pcp [H]

Synonym: NT01EI_2100

Alternate gene names: 238919996

Gene position: 2022133-2022600 (Clockwise)

Preceding gene: 238919990

Following gene: 238919998

Centisome position: 53.04

GC content: 60.9

Gene sequence:

>468_bases
ATGATAAAGCGTCTTATTATTGTCGCTATTGCCACGGCAACCCTGGCTGGCTGCGCCAATACCAGCACCCTGGCCGGTGA
CGTGTACAGCGCCAATCAAGCTAAGCAGGTACAGCAGGTCACGTATGGCACCATCGTCTCCATGGAGCCGGTACAGATCC
AGGCCGGCAACGAGGCGAACGTGATCGGCACCATCGGTGGCGCCGTCATCGGTGGCCTGCTGGGCAACACCATCGGCGGC
GGCACCGGACGTAACCTGGCGACCGCCGCAGGCGCCGTCGCGGGCGGCGTGGCCGGCAACAGCATTGAGGGCGTGGTCAA
CCGTACCAACGGCGTCCAGTTGGTGATCCGTCTGGACAGCGGTAAGACCATCGCCGTGGTACAGAAGAACGATAAGCAGG
CTTTCCGGATTAATCAACGTGTGATGCTGCTGAGCAGCGGCAGCACCGTTAATGTCTCGCCAATGTGA

Upstream 100 bases:

>100_bases
ACTATGCTCGTCCCGCGGGCGTGTCCGGCCATGATGCCCAGCCATCTCGCCGCCGCCCCCCGGGAAAGAACACGGTAAGG
GTAATAAAAGGAACCAAATC

Downstream 100 bases:

>100_bases
TCCTGATGCAATAAAAAAACCGGAGGCATGCCTTCCGGTTTTTTTGACTGCTCGAACGATGTGCGTTTATTTATTCTGCA
AATGAATAATGTTCTGCTCC

Product: outer membrane lipoprotein pcp

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MIKRLIIVAIATATLAGCANTSTLAGDVYSANQAKQVQQVTYGTIVSMEPVQIQAGNEANVIGTIGGAVIGGLLGNTIGG
GTGRNLATAAGAVAGGVAGNSIEGVVNRTNGVQLVIRLDSGKTIAVVQKNDKQAFRINQRVMLLSSGSTVNVSPM

Sequences:

>Translated_155_residues
MIKRLIIVAIATATLAGCANTSTLAGDVYSANQAKQVQQVTYGTIVSMEPVQIQAGNEANVIGTIGGAVIGGLLGNTIGG
GTGRNLATAAGAVAGGVAGNSIEGVVNRTNGVQLVIRLDSGKTIAVVQKNDKQAFRINQRVMLLSSGSTVNVSPM
>Mature_155_residues
MIKRLIIVAIATATLAGCANTSTLAGDVYSANQAKQVQQVTYGTIVSMEPVQIQAGNEANVIGTIGGAVIGGLLGNTIGG
GTGRNLATAAGAVAGGVAGNSIEGVVNRTNGVQLVIRLDSGKTIAVVQKNDKQAFRINQRVMLLSSGSTVNVSPM

Specific function: Facilitates ferrioxamine uptake [H]

COG id: COG3133

COG function: function code M; Outer membrane lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pcp/slyB lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI48994887, Length=154, Percent_Identity=61.6883116883117, Blast_Score=162, Evalue=9e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008816 [H]

Pfam domain/function: PF05433 Rick_17kDa_Anti [H]

EC number: NA

Molecular weight: Translated: 15578; Mature: 15578

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKRLIIVAIATATLAGCANTSTLAGDVYSANQAKQVQQVTYGTIVSMEPVQIQAGNEAN
CCHHEEEEEEHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEECCCEEEECCCCCC
VIGTIGGAVIGGLLGNTIGGGTGRNLATAAGAVAGGVAGNSIEGVVNRTNGVQLVIRLDS
EEECHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEECC
GKTIAVVQKNDKQAFRINQRVMLLSSGSTVNVSPM
CCEEEEEECCCCCEEEECEEEEEEECCCEEEECCC
>Mature Secondary Structure
MIKRLIIVAIATATLAGCANTSTLAGDVYSANQAKQVQQVTYGTIVSMEPVQIQAGNEAN
CCHHEEEEEEHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEECCCEEEECCCCCC
VIGTIGGAVIGGLLGNTIGGGTGRNLATAAGAVAGGVAGNSIEGVVNRTNGVQLVIRLDS
EEECHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEECC
GKTIAVVQKNDKQAFRINQRVMLLSSGSTVNVSPM
CCEEEEEECCCCCEEEECEEEEEEECCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1732192 [H]