| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
Click here to switch to the map view.
The map label for this gene is 238919904
Identifier: 238919904
GI number: 238919904
Start: 1939153
End: 1939404
Strand: Direct
Name: 238919904
Synonym: NT01EI_2008
Alternate gene names: NA
Gene position: 1939153-1939404 (Clockwise)
Preceding gene: 238919895
Following gene: 238919905
Centisome position: 50.87
GC content: 51.59
Gene sequence:
>252_bases ATGGCATACCAAATTCTCACGACCACCGCCGCCAGCATTACCGACCTGAAACGCAATCCAATGGGTACCATTGCTGAAGG TGACGGCAATGCCGTAGCAATCTTAAACCGGAATGAGCCGGCCTTTTACTGCGTTCCACCGGAACTCTACGCTTACTATC TGGAGCTGGCTGAAGATGCGGCGCTTAATCGTATCGCCGATGAGCGTCTGGAGGACGCTGAGTTTGTCAGCGTAAATATC GATGACCTATAA
Upstream 100 bases:
>100_bases CGGGGTTTTACGGCGCACTGAATAAAAAGCATGCTTAAAAGCACCTTTAAAGGTGTCTATAAAAACGCTATAGTGTATCT ATCTGACAAGGAGAAGACAT
Downstream 100 bases:
>100_bases ACTGAGCTTTGAAAAGCGAGCCCTGAAAGAGTGGAAAAAACTGGCACCGCCGATTCAAAGCCAGTTGAAAAAGAAACTGA TCGAACGCCTGGAAAACCCA
Product: hypothetical protein
Products: NA
Alternate protein names: Stability Protein StbD; Prevent-Host-Death Protein; Antitoxin Of xin-Antitoxin Stability System
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MAYQILTTTAASITDLKRNPMGTIAEGDGNAVAILNRNEPAFYCVPPELYAYYLELAEDAALNRIADERLEDAEFVSVNI DDL
Sequences:
>Translated_83_residues MAYQILTTTAASITDLKRNPMGTIAEGDGNAVAILNRNEPAFYCVPPELYAYYLELAEDAALNRIADERLEDAEFVSVNI DDL >Mature_82_residues AYQILTTTAASITDLKRNPMGTIAEGDGNAVAILNRNEPAFYCVPPELYAYYLELAEDAALNRIADERLEDAEFVSVNID DL
Specific function: Unknown
COG id: COG2161
COG function: function code D; Antitoxin of toxin-antitoxin stability system
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9155; Mature: 9024
Theoretical pI: Translated: 3.76; Mature: 3.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYQILTTTAASITDLKRNPMGTIAEGDGNAVAILNRNEPAFYCVPPELYAYYLELAEDA CCEEEEECCCHHHHHCCCCCCCEEEECCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHH ALNRIADERLEDAEFVSVNIDDL HHHHHHHHCCCCCEEEEEEECCC >Mature Secondary Structure AYQILTTTAASITDLKRNPMGTIAEGDGNAVAILNRNEPAFYCVPPELYAYYLELAEDA CEEEEECCCHHHHHCCCCCCCEEEECCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHH ALNRIADERLEDAEFVSVNIDDL HHHHHHHHCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA