| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238919808
Identifier: 238919808
GI number: 238919808
Start: 1840605
End: 1841126
Strand: Reverse
Name: 238919808
Synonym: NT01EI_1912
Alternate gene names: NA
Gene position: 1841126-1840605 (Counterclockwise)
Preceding gene: 238919809
Following gene: 238919807
Centisome position: 48.29
GC content: 61.11
Gene sequence:
>522_bases ATGCATCCTAAAAACCTGTCACGCGTTGCCGAACTGGACGCCTTTCTATCCACGGCGCCGATGGATACCGTTGAAGAGAT AGCCCAACGCTTCGCGCTTTCTGCGCTGGATGTGCTGCGCCGCCTGCCGCAGGTCACCCTGTGCGGCGGGGATGCCTTTG ATCGGGTTTGGCAGACCCTGACCGGCTGGGGCGATGTCACTACGCTTATCAACAACCCCGATTTAATTCTGGAGTTTCAT GGCCCGCTGCCCGGCGGCGCACACCGGCACGGTTTTTTCAATCTGCGCAGTGAGGGCGGCCTGAGCGGCCATATCCGCGC CCAGCGCTGCCGTCACATTGCGTTGGTTGAGCGCCCTTTCATGGGGATGGAGACCGCCAGCGTGTGGTTTATCAACCCGG AAGGGCAGGCCATGCTGAAAGTATTCGTTGGCCGGGACGAAAAGCGGCGCCTGCGGACAGAACCGCTGATGGCTTTCCGC ACCCTGGCGCAGACGCTGGCAACCACGGAGGAGTACAGATGA
Upstream 100 bases:
>100_bases CAGCTGTTGGCCCAGTTGTTAACCCCGACAGCGATGACATCCCCTGTTGCGGGCGCCCGCGCCGCACACGCCCCCCAACA CACACCCCCGGAGAGACACC
Downstream 100 bases:
>100_bases CACCGTGGATCCTGTTTGGCGCCGGACAGGGCGCCGGCCTGGCGTTGGCACAACAGGCGGCGGGCCATCACCCGCTGTAT GCCCTGGTGCGTAAGGAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Heme Utilization Protein HuvX; Heme Iron Utilization Protein; Coproporphyrinogen III Oxidase; HutX Protein; Heme Utilization Protein HugX; Oxygen-Independent Coproporphyrinogen III Oxidase; HugX Protein; Heme Uptake And Utilization Protein HuvX; Oxygen Independent Coproporphyrinogen III Oxidase; Coproporphyrinogen Dehydrogenase
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MHPKNLSRVAELDAFLSTAPMDTVEEIAQRFALSALDVLRRLPQVTLCGGDAFDRVWQTLTGWGDVTTLINNPDLILEFH GPLPGGAHRHGFFNLRSEGGLSGHIRAQRCRHIALVERPFMGMETASVWFINPEGQAMLKVFVGRDEKRRLRTEPLMAFR TLAQTLATTEEYR
Sequences:
>Translated_173_residues MHPKNLSRVAELDAFLSTAPMDTVEEIAQRFALSALDVLRRLPQVTLCGGDAFDRVWQTLTGWGDVTTLINNPDLILEFH GPLPGGAHRHGFFNLRSEGGLSGHIRAQRCRHIALVERPFMGMETASVWFINPEGQAMLKVFVGRDEKRRLRTEPLMAFR TLAQTLATTEEYR >Mature_173_residues MHPKNLSRVAELDAFLSTAPMDTVEEIAQRFALSALDVLRRLPQVTLCGGDAFDRVWQTLTGWGDVTTLINNPDLILEFH GPLPGGAHRHGFFNLRSEGGLSGHIRAQRCRHIALVERPFMGMETASVWFINPEGQAMLKVFVGRDEKRRLRTEPLMAFR TLAQTLATTEEYR
Specific function: Unknown
COG id: COG3721
COG function: function code P; Putative heme iron utilization protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19500; Mature: 19500
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: PS00519 HTH_ASNC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPKNLSRVAELDAFLSTAPMDTVEEIAQRFALSALDVLRRLPQVTLCGGDAFDRVWQTL CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHH TGWGDVTTLINNPDLILEFHGPLPGGAHRHGFFNLRSEGGLSGHIRAQRCRHIALVERPF HCCCCEEEEECCCCEEEEECCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCC MGMETASVWFINPEGQAMLKVFVGRDEKRRLRTEPLMAFRTLAQTLATTEEYR CCCCCCEEEEECCCCCEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHPKNLSRVAELDAFLSTAPMDTVEEIAQRFALSALDVLRRLPQVTLCGGDAFDRVWQTL CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHH TGWGDVTTLINNPDLILEFHGPLPGGAHRHGFFNLRSEGGLSGHIRAQRCRHIALVERPF HCCCCEEEEECCCCEEEEECCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCC MGMETASVWFINPEGQAMLKVFVGRDEKRRLRTEPLMAFRTLAQTLATTEEYR CCCCCCEEEEECCCCCEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA