Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919808

Identifier: 238919808

GI number: 238919808

Start: 1840605

End: 1841126

Strand: Reverse

Name: 238919808

Synonym: NT01EI_1912

Alternate gene names: NA

Gene position: 1841126-1840605 (Counterclockwise)

Preceding gene: 238919809

Following gene: 238919807

Centisome position: 48.29

GC content: 61.11

Gene sequence:

>522_bases
ATGCATCCTAAAAACCTGTCACGCGTTGCCGAACTGGACGCCTTTCTATCCACGGCGCCGATGGATACCGTTGAAGAGAT
AGCCCAACGCTTCGCGCTTTCTGCGCTGGATGTGCTGCGCCGCCTGCCGCAGGTCACCCTGTGCGGCGGGGATGCCTTTG
ATCGGGTTTGGCAGACCCTGACCGGCTGGGGCGATGTCACTACGCTTATCAACAACCCCGATTTAATTCTGGAGTTTCAT
GGCCCGCTGCCCGGCGGCGCACACCGGCACGGTTTTTTCAATCTGCGCAGTGAGGGCGGCCTGAGCGGCCATATCCGCGC
CCAGCGCTGCCGTCACATTGCGTTGGTTGAGCGCCCTTTCATGGGGATGGAGACCGCCAGCGTGTGGTTTATCAACCCGG
AAGGGCAGGCCATGCTGAAAGTATTCGTTGGCCGGGACGAAAAGCGGCGCCTGCGGACAGAACCGCTGATGGCTTTCCGC
ACCCTGGCGCAGACGCTGGCAACCACGGAGGAGTACAGATGA

Upstream 100 bases:

>100_bases
CAGCTGTTGGCCCAGTTGTTAACCCCGACAGCGATGACATCCCCTGTTGCGGGCGCCCGCGCCGCACACGCCCCCCAACA
CACACCCCCGGAGAGACACC

Downstream 100 bases:

>100_bases
CACCGTGGATCCTGTTTGGCGCCGGACAGGGCGCCGGCCTGGCGTTGGCACAACAGGCGGCGGGCCATCACCCGCTGTAT
GCCCTGGTGCGTAAGGAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Heme Utilization Protein HuvX; Heme Iron Utilization Protein; Coproporphyrinogen III Oxidase; HutX Protein; Heme Utilization Protein HugX; Oxygen-Independent Coproporphyrinogen III Oxidase; HugX Protein; Heme Uptake And Utilization Protein HuvX; Oxygen Independent Coproporphyrinogen III Oxidase; Coproporphyrinogen Dehydrogenase

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MHPKNLSRVAELDAFLSTAPMDTVEEIAQRFALSALDVLRRLPQVTLCGGDAFDRVWQTLTGWGDVTTLINNPDLILEFH
GPLPGGAHRHGFFNLRSEGGLSGHIRAQRCRHIALVERPFMGMETASVWFINPEGQAMLKVFVGRDEKRRLRTEPLMAFR
TLAQTLATTEEYR

Sequences:

>Translated_173_residues
MHPKNLSRVAELDAFLSTAPMDTVEEIAQRFALSALDVLRRLPQVTLCGGDAFDRVWQTLTGWGDVTTLINNPDLILEFH
GPLPGGAHRHGFFNLRSEGGLSGHIRAQRCRHIALVERPFMGMETASVWFINPEGQAMLKVFVGRDEKRRLRTEPLMAFR
TLAQTLATTEEYR
>Mature_173_residues
MHPKNLSRVAELDAFLSTAPMDTVEEIAQRFALSALDVLRRLPQVTLCGGDAFDRVWQTLTGWGDVTTLINNPDLILEFH
GPLPGGAHRHGFFNLRSEGGLSGHIRAQRCRHIALVERPFMGMETASVWFINPEGQAMLKVFVGRDEKRRLRTEPLMAFR
TLAQTLATTEEYR

Specific function: Unknown

COG id: COG3721

COG function: function code P; Putative heme iron utilization protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19500; Mature: 19500

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: PS00519 HTH_ASNC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPKNLSRVAELDAFLSTAPMDTVEEIAQRFALSALDVLRRLPQVTLCGGDAFDRVWQTL
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHH
TGWGDVTTLINNPDLILEFHGPLPGGAHRHGFFNLRSEGGLSGHIRAQRCRHIALVERPF
HCCCCEEEEECCCCEEEEECCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCC
MGMETASVWFINPEGQAMLKVFVGRDEKRRLRTEPLMAFRTLAQTLATTEEYR
CCCCCCEEEEECCCCCEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHPKNLSRVAELDAFLSTAPMDTVEEIAQRFALSALDVLRRLPQVTLCGGDAFDRVWQTL
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHH
TGWGDVTTLINNPDLILEFHGPLPGGAHRHGFFNLRSEGGLSGHIRAQRCRHIALVERPF
HCCCCEEEEECCCCEEEEECCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCC
MGMETASVWFINPEGQAMLKVFVGRDEKRRLRTEPLMAFRTLAQTLATTEEYR
CCCCCCEEEEECCCCCEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA