| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is yfeE [H]
Identifier: 238919634
GI number: 238919634
Start: 1689586
End: 1690131
Strand: Direct
Name: yfeE [H]
Synonym: NT01EI_1735
Alternate gene names: 238919634
Gene position: 1689586-1690131 (Clockwise)
Preceding gene: 238919630
Following gene: 238919637
Centisome position: 44.32
GC content: 53.11
Gene sequence:
>546_bases ATGACCTATCAACAGGCCGGCTGGGTGGCGATAGCCAAGCGTCTTTTAGGTTGGATAGTGTTCATTCCCGCGTTGCTGTC GACGCTGATTTCGCTGCTGGGCTTTTTATACCAGCACAGTGAAAAGCAGCAGGGCATCAATGCGGTAATGCTGGATTTTA TGCATGTCATGATTGACATGGTGCGTTTCAATATGACGTTTCTGGATTTTTTCTGGCAGCACTCGCCGTTGCCGCGCGGG GACGCAGGGCTGAGCGGCGCCAATTTTTTGTTTTTAGTGATTTACTGGATGATTTTTGTCGGTATGGCGCTGTGCGCTTC CGGTGCGCGTATGAGCCGTCAGGTCCGTCATATCCGCGAGGGGCTTGAGGATCACCTGATCCTCGAACGGGCCAAAGGGG AAACGGGGCAAACCCGTGCTCAGCTGGAGCAGCGCATTATTATCCCGCGTCATGCCATTCTGCTGCAGATTTTTCCGCTC TACCTGCTGCCACTGATTATTCTGGTGCTAGGTTACCTGGCGCTGCATTTGCTGGGGATGGTATAG
Upstream 100 bases:
>100_bases GGTAATCTCCATACTGCGCAGAGGATGAATTGCGTCGCCGGATACGGGCACGTAGACTGCGCATGTTTATTGGGAATTTG CAGAGCGTTAAGGGGAGTCT
Downstream 100 bases:
>100_bases CCCGATCGCACCCGGCGTTGACCGGGCGCGTCGGCCGGGGCTATGCCGGCGTCTCTTGCACCAGTGCTTCGATCGCTTTT TCAGCCTGAGCCAGGTGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MTYQQAGWVAIAKRLLGWIVFIPALLSTLISLLGFLYQHSEKQQGINAVMLDFMHVMIDMVRFNMTFLDFFWQHSPLPRG DAGLSGANFLFLVIYWMIFVGMALCASGARMSRQVRHIREGLEDHLILERAKGETGQTRAQLEQRIIIPRHAILLQIFPL YLLPLIILVLGYLALHLLGMV
Sequences:
>Translated_181_residues MTYQQAGWVAIAKRLLGWIVFIPALLSTLISLLGFLYQHSEKQQGINAVMLDFMHVMIDMVRFNMTFLDFFWQHSPLPRG DAGLSGANFLFLVIYWMIFVGMALCASGARMSRQVRHIREGLEDHLILERAKGETGQTRAQLEQRIIIPRHAILLQIFPL YLLPLIILVLGYLALHLLGMV >Mature_180_residues TYQQAGWVAIAKRLLGWIVFIPALLSTLISLLGFLYQHSEKQQGINAVMLDFMHVMIDMVRFNMTFLDFFWQHSPLPRGD AGLSGANFLFLVIYWMIFVGMALCASGARMSRQVRHIREGLEDHLILERAKGETGQTRAQLEQRIIIPRHAILLQIFPLY LLPLIILVLGYLALHLLGMV
Specific function: Putative regulator of yfeABCD, an ABC transporter locus involved in inorganic iron transport [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yniB [H]
Homologues:
Organism=Escherichia coli, GI1788020, Length=181, Percent_Identity=58.5635359116022, Blast_Score=221, Evalue=3e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20692; Mature: 20561
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYQQAGWVAIAKRLLGWIVFIPALLSTLISLLGFLYQHSEKQQGINAVMLDFMHVMIDM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRFNMTFLDFFWQHSPLPRGDAGLSGANFLFLVIYWMIFVGMALCASGARMSRQVRHIRE HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH GLEDHLILERAKGETGQTRAQLEQRIIIPRHAILLQIFPLYLLPLIILVLGYLALHLLGM HHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC V C >Mature Secondary Structure TYQQAGWVAIAKRLLGWIVFIPALLSTLISLLGFLYQHSEKQQGINAVMLDFMHVMIDM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRFNMTFLDFFWQHSPLPRGDAGLSGANFLFLVIYWMIFVGMALCASGARMSRQVRHIRE HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH GLEDHLILERAKGETGQTRAQLEQRIIIPRHAILLQIFPLYLLPLIILVLGYLALHLLGM HHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC V C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]