Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

Click here to switch to the map view.

The map label for this gene is znuA [H]

Identifier: 238919506

GI number: 238919506

Start: 1562832

End: 1563836

Strand: Direct

Name: znuA [H]

Synonym: NT01EI_1602

Alternate gene names: 238919506

Gene position: 1562832-1563836 (Clockwise)

Preceding gene: 238919503

Following gene: 238919507

Centisome position: 40.99

GC content: 51.74

Gene sequence:

>1005_bases
ATGATACCGCAAAAAAATATAATTAAGCGCACGCTTATTGCTTCCGCGCTGTCGCTGTGTGCGCTGGCGGGCAGTGCACA
GGCTGACGTCGTGACCTCGGTTAGGCCGTTAGGTTTCATCGCGGCGGCGATTGCCGACGGGGTAATGCTGACGCATGTTC
TGCTGCCTGACGGCGCCTCTCCCCATGATTATGCGCTGCGTCCCTCGGATATCAAACGATTGCACGATGCCAACCTGGTG
GTATGGATAGGGCCTAAAATGGAGAGCTTTCTTGAAAAGCCGACTCAACAGCTAGAAAGTAATAAAAATCTCACTCTTGT
CACCCTTCCTGGCGTACGTAGTCAACTCATTGTGGGTGATGATGATGATGAACACGGTCATCCTGCCGCACAGAGTGAGA
GTCATGCGGAAAATTCTGATTTTTCCGGGGCACATATTGTTACAGAGGGCGTCAGCGCTGGTTTCGCGGGCGATAGTGAT
CACGATCATGGTCAATACAATATGCATATCTGGCTCTCTCCGGCGATTGCAAAACAGGTGGCGATTGCGATTCATGACCG
ATTAGTGCAACAAAGCCCACAAAATAAAGACAAACTGGATGTCAACCTACGTAAATTCGAGCAACAACTCGAGCAGACGG
AAAAGAAAGTTGGTATCATGCTGCAGCCTGTGCAGGATAAAGGGTATTTTGTCTTTCATGATGCCTATGGTTACTTCGAG
AAAGCCTTTGGCCTGACTCCATTGGGGCATTTCACGGTCAATCCCGAGATACAGCCTGGCGCACGGCGCTTACACCAAAT
TCGAACACAGCTGGTTGAGCAAAAGGCGGTCTGCGTTTTTGCTGAGCCACAGTTCAGGCCAGCCGTTATCTCGGCGATTG
CGCAGGGGACCCCTGTCCGGCAGGGTACGCTAGATCCCCTGGGAAGCGCGATCCCACTGAGTGCGGACAGCTATATGGTC
TTTTTGACCACGCTGGCGCAGCAGTATTCAAGCTGCCTGAAGTGA

Upstream 100 bases:

>100_bases
ACGGTAGATTATCTTGCTGTGACATGGTTACGGCATATTGCACTATAAGTTAAATGTTATAATATAACGTTCCATAAAAC
GTTACCCGGAGATTTTTGTC

Downstream 100 bases:

>100_bases
GATTAAGAGGAAAATCCGAGTGCAGCAGATAGCACGTTCTATCGCTCAGGCATACAGTAATTTGCCCCGCCCCCACCGGG
TTATGCTGGGGTCCCTGAGC

Product: high-affinity zinc transporter periplasmic component

Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MIPQKNIIKRTLIASALSLCALAGSAQADVVTSVRPLGFIAAAIADGVMLTHVLLPDGASPHDYALRPSDIKRLHDANLV
VWIGPKMESFLEKPTQQLESNKNLTLVTLPGVRSQLIVGDDDDEHGHPAAQSESHAENSDFSGAHIVTEGVSAGFAGDSD
HDHGQYNMHIWLSPAIAKQVAIAIHDRLVQQSPQNKDKLDVNLRKFEQQLEQTEKKVGIMLQPVQDKGYFVFHDAYGYFE
KAFGLTPLGHFTVNPEIQPGARRLHQIRTQLVEQKAVCVFAEPQFRPAVISAIAQGTPVRQGTLDPLGSAIPLSADSYMV
FLTTLAQQYSSCLK

Sequences:

>Translated_334_residues
MIPQKNIIKRTLIASALSLCALAGSAQADVVTSVRPLGFIAAAIADGVMLTHVLLPDGASPHDYALRPSDIKRLHDANLV
VWIGPKMESFLEKPTQQLESNKNLTLVTLPGVRSQLIVGDDDDEHGHPAAQSESHAENSDFSGAHIVTEGVSAGFAGDSD
HDHGQYNMHIWLSPAIAKQVAIAIHDRLVQQSPQNKDKLDVNLRKFEQQLEQTEKKVGIMLQPVQDKGYFVFHDAYGYFE
KAFGLTPLGHFTVNPEIQPGARRLHQIRTQLVEQKAVCVFAEPQFRPAVISAIAQGTPVRQGTLDPLGSAIPLSADSYMV
FLTTLAQQYSSCLK
>Mature_334_residues
MIPQKNIIKRTLIASALSLCALAGSAQADVVTSVRPLGFIAAAIADGVMLTHVLLPDGASPHDYALRPSDIKRLHDANLV
VWIGPKMESFLEKPTQQLESNKNLTLVTLPGVRSQLIVGDDDDEHGHPAAQSESHAENSDFSGAHIVTEGVSAGFAGDSD
HDHGQYNMHIWLSPAIAKQVAIAIHDRLVQQSPQNKDKLDVNLRKFEQQLEQTEKKVGIMLQPVQDKGYFVFHDAYGYFE
KAFGLTPLGHFTVNPEIQPGARRLHQIRTQLVEQKAVCVFAEPQFRPAVISAIAQGTPVRQGTLDPLGSAIPLSADSYMV
FLTTLAQQYSSCLK

Specific function: Involved in the high-affinity zinc uptake transport system [H]

COG id: COG4531

COG function: function code P; ABC-type Zn2+ transport system, periplasmic component/surface adhesin

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 9 family [H]

Homologues:

Organism=Escherichia coli, GI87081990, Length=310, Percent_Identity=58.3870967741935, Blast_Score=368, Evalue=1e-103,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006127 [H]

Pfam domain/function: PF01297 SBP_bac_9 [H]

EC number: NA

Molecular weight: Translated: 36452; Mature: 36452

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPQKNIIKRTLIASALSLCALAGSAQADVVTSVRPLGFIAAAIADGVMLTHVLLPDGAS
CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCC
PHDYALRPSDIKRLHDANLVVWIGPKMESFLEKPTQQLESNKNLTLVTLPGVRSQLIVGD
CCCCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEECC
DDDEHGHPAAQSESHAENSDFSGAHIVTEGVSAGFAGDSDHDHGQYNMHIWLSPAIAKQV
CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECHHHHHHH
AIAIHDRLVQQSPQNKDKLDVNLRKFEQQLEQTEKKVGIMLQPVQDKGYFVFHDAYGYFE
HHHHHHHHHHCCCCCCCHHCHHHHHHHHHHHHHHHHHCEEEEEECCCCEEEEECCHHHHH
KAFGLTPLGHFTVNPEIQPGARRLHQIRTQLVEQKAVCVFAEPQFRPAVISAIAQGTPVR
HHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHCCCCCC
QGTLDPLGSAIPLSADSYMVFLTTLAQQYSSCLK
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIPQKNIIKRTLIASALSLCALAGSAQADVVTSVRPLGFIAAAIADGVMLTHVLLPDGAS
CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCC
PHDYALRPSDIKRLHDANLVVWIGPKMESFLEKPTQQLESNKNLTLVTLPGVRSQLIVGD
CCCCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEECC
DDDEHGHPAAQSESHAENSDFSGAHIVTEGVSAGFAGDSDHDHGQYNMHIWLSPAIAKQV
CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECHHHHHHH
AIAIHDRLVQQSPQNKDKLDVNLRKFEQQLEQTEKKVGIMLQPVQDKGYFVFHDAYGYFE
HHHHHHHHHHCCCCCCCHHCHHHHHHHHHHHHHHHHHCEEEEEECCCCEEEEECCHHHHH
KAFGLTPLGHFTVNPEIQPGARRLHQIRTQLVEQKAVCVFAEPQFRPAVISAIAQGTPVR
HHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHCCCCCC
QGTLDPLGSAIPLSADSYMVFLTTLAQQYSSCLK
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Zn (II) [Periplasm]; H2O; ATP [C]

Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]