| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is pheP [H]
Identifier: 238919494
GI number: 238919494
Start: 1552568
End: 1553935
Strand: Direct
Name: pheP [H]
Synonym: NT01EI_1590
Alternate gene names: 238919494
Gene position: 1552568-1553935 (Clockwise)
Preceding gene: 238919491
Following gene: 238919497
Centisome position: 40.73
GC content: 60.31
Gene sequence:
>1368_bases ATGGGCGATTCGCAGCACATCAGTACGACTCTTGAGAGAGGATTAAAAAACCGGCATATCCAGCTGATCGCCCTGGGCGG CGCGGTGGGCACCGGTCTGTTTCTGGGGATCGGTCCGGCCATTCAGCTGGCCGGACCGGCGGTTTTACTGGGCTATGCCA TCGGCGGCGCAATCGCGTTTCTGATCATGCGCCAGCTGGGGGAGATGGTGGTGCAGGAGCCGGTTGCCGGTTCGTTTGCC CACTTTGCCCATAAATATTGGGGACCGTTTGCCGGTTTTGTCTCCGGCTGGAACTATTGGGTCATGTTCGTGCTGGTCGG CATGGCCGAGCTGACCGCGGCCGGTATCTATATGCAGTATTGGTGGCCGGATGTGCCGACCTGGATGTGGGCCAGCCTGT TCTTTGTCCTGATCAACGCGCTGAATATGGTGAACGTGCGTCTGTACGGTGAAACCGAGTTCTGGTTCGCCCTGATCAAG GTGGCGGCGATCCTCGGGATGATCGTGTTCGGCAGCTGGCTGCTGCTGTCCGGTGACGCCGGGCCCCAGGCGGGGCTGGC GAATCTGTGGGTGCACGGCGGCTTTTTACCGCATGGCTGGGGGGGACTGATCATGGCGATGGCGGTGATCATGTTCTCCT TCGGCGGCCTTGAGCTGATCGGGATCACCGCCGCGGAGGCCAGCGAGCCGGAAAAGAGCATTCCCAAGGCAACCAATCAG GTGGTCTACCGTATCCTGATCTTTTATATCGGCTCCCTGCTGGTACTGCTGGCCCTGTACCCCTGGTCGCAGATCGGCGC CAGCAGCAGTCCGTTTGTGATGATCTTCCATCACTTGAACAGCAACACGGTAGCGGCGGTATTGAATGTGGTGATCCTGA CCGCCGCGCTGTCGGTATATAACAGCTGTGTCTACTCCAATAGCCGTATGCTGTACGGGCTGTCGCTGCAGGGTAATGCG CCGCGCCGCCTGACCCGGGTCAATCGCCGCGGGATCCCGGTGTGGTCAATCGGCCTTTCGGGGCTCACGACCTCTCTGGT GATCCTGATTAACTATCTGATGCCGGGTAAGGCGTTCGGGCTACTGATGGCGCTGGTGGTCTCTACGCTGGTGATCAACT GGGTGATGATCTGCATGGCGCATCTGAAGTTCAGGGCGGTGCAGAATCGTCTGGGCGTGACGGCACGGTTCCGCGCGCTG TGGTATCCCTATGGTAACTACCTGTGCCTGGCGTTTCTTGGCCTGATCTTGGTGATTATGGTGCTGACGCCGGGGATCCG GATATCGGTGCTGCTGCTGCCGCTGTGGCTGGGCGTGCTGTGGGGCGGATTCTGCCTGGCGCGGATGCGCCGCGGAAAAT CGGCGTAG
Upstream 100 bases:
>100_bases GGGTGATACAAACCCATGCGCGTTGTAAACAAAATAATACGATGCGCCACGGAGACCGCAGTTAATTCAGTTGCCATGAC GCTATCGCACAGAGGAAAAA
Downstream 100 bases:
>100_bases TGTCACGCAAGGCGACCCGCACACAGCGGGCCGCCTTGTGGTTTAATAACCGGTCTGTAGCAACTGTCCCCAGGGCAGAT AGTAGAGATTGGCCACCACC
Product: phenylalanine-specific permease
Products: Proton [Cytoplasm]; L-phenylalanine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 455; Mature: 454
Protein sequence:
>455_residues MGDSQHISTTLERGLKNRHIQLIALGGAVGTGLFLGIGPAIQLAGPAVLLGYAIGGAIAFLIMRQLGEMVVQEPVAGSFA HFAHKYWGPFAGFVSGWNYWVMFVLVGMAELTAAGIYMQYWWPDVPTWMWASLFFVLINALNMVNVRLYGETEFWFALIK VAAILGMIVFGSWLLLSGDAGPQAGLANLWVHGGFLPHGWGGLIMAMAVIMFSFGGLELIGITAAEASEPEKSIPKATNQ VVYRILIFYIGSLLVLLALYPWSQIGASSSPFVMIFHHLNSNTVAAVLNVVILTAALSVYNSCVYSNSRMLYGLSLQGNA PRRLTRVNRRGIPVWSIGLSGLTTSLVILINYLMPGKAFGLLMALVVSTLVINWVMICMAHLKFRAVQNRLGVTARFRAL WYPYGNYLCLAFLGLILVIMVLTPGIRISVLLLPLWLGVLWGGFCLARMRRGKSA
Sequences:
>Translated_455_residues MGDSQHISTTLERGLKNRHIQLIALGGAVGTGLFLGIGPAIQLAGPAVLLGYAIGGAIAFLIMRQLGEMVVQEPVAGSFA HFAHKYWGPFAGFVSGWNYWVMFVLVGMAELTAAGIYMQYWWPDVPTWMWASLFFVLINALNMVNVRLYGETEFWFALIK VAAILGMIVFGSWLLLSGDAGPQAGLANLWVHGGFLPHGWGGLIMAMAVIMFSFGGLELIGITAAEASEPEKSIPKATNQ VVYRILIFYIGSLLVLLALYPWSQIGASSSPFVMIFHHLNSNTVAAVLNVVILTAALSVYNSCVYSNSRMLYGLSLQGNA PRRLTRVNRRGIPVWSIGLSGLTTSLVILINYLMPGKAFGLLMALVVSTLVINWVMICMAHLKFRAVQNRLGVTARFRAL WYPYGNYLCLAFLGLILVIMVLTPGIRISVLLLPLWLGVLWGGFCLARMRRGKSA >Mature_454_residues GDSQHISTTLERGLKNRHIQLIALGGAVGTGLFLGIGPAIQLAGPAVLLGYAIGGAIAFLIMRQLGEMVVQEPVAGSFAH FAHKYWGPFAGFVSGWNYWVMFVLVGMAELTAAGIYMQYWWPDVPTWMWASLFFVLINALNMVNVRLYGETEFWFALIKV AAILGMIVFGSWLLLSGDAGPQAGLANLWVHGGFLPHGWGGLIMAMAVIMFSFGGLELIGITAAEASEPEKSIPKATNQV VYRILIFYIGSLLVLLALYPWSQIGASSSPFVMIFHHLNSNTVAAVLNVVILTAALSVYNSCVYSNSRMLYGLSLQGNAP RRLTRVNRRGIPVWSIGLSGLTTSLVILINYLMPGKAFGLLMALVVSTLVINWVMICMAHLKFRAVQNRLGVTARFRALW YPYGNYLCLAFLGLILVIMVLTPGIRISVLLLPLWLGVLWGGFCLARMRRGKSA
Specific function: Permease that is involved in the transport across the cytoplasmic membrane of phenylalanine [H]
COG id: COG1113
COG function: function code E; Gamma-aminobutyrate permease and related permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Amino acid transporter (AAT) (TC 2.A.3.1) family [H]
Homologues:
Organism=Homo sapiens, GI110347453, Length=353, Percent_Identity=24.0793201133144, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI181337167, Length=352, Percent_Identity=25.2840909090909, Blast_Score=69, Evalue=7e-12, Organism=Escherichia coli, GI1786789, Length=447, Percent_Identity=72.2595078299776, Blast_Score=664, Evalue=0.0, Organism=Escherichia coli, GI1786302, Length=454, Percent_Identity=65.6387665198238, Blast_Score=617, Evalue=1e-178, Organism=Escherichia coli, GI48994972, Length=441, Percent_Identity=40.8163265306122, Blast_Score=340, Evalue=1e-94, Organism=Escherichia coli, GI1786602, Length=457, Percent_Identity=42.4507658643326, Blast_Score=338, Evalue=3e-94, Organism=Escherichia coli, GI1790653, Length=449, Percent_Identity=37.1937639198218, Blast_Score=316, Evalue=2e-87, Organism=Escherichia coli, GI87081708, Length=460, Percent_Identity=35.4347826086957, Blast_Score=285, Evalue=3e-78, Organism=Escherichia coli, GI1789017, Length=434, Percent_Identity=36.8663594470046, Blast_Score=282, Evalue=3e-77, Organism=Escherichia coli, GI87081915, Length=438, Percent_Identity=35.1598173515982, Blast_Score=278, Evalue=6e-76, Organism=Escherichia coli, GI1788480, Length=385, Percent_Identity=37.4025974025974, Blast_Score=252, Evalue=4e-68, Organism=Escherichia coli, GI87081869, Length=324, Percent_Identity=22.5308641975309, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI87082023, Length=199, Percent_Identity=26.1306532663317, Blast_Score=65, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17531343, Length=377, Percent_Identity=21.4854111405836, Blast_Score=68, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6320772, Length=452, Percent_Identity=32.5221238938053, Blast_Score=228, Evalue=1e-60, Organism=Saccharomyces cerevisiae, GI6324061, Length=443, Percent_Identity=31.8284424379233, Blast_Score=225, Evalue=1e-59, Organism=Saccharomyces cerevisiae, GI6324924, Length=445, Percent_Identity=32.5842696629214, Blast_Score=216, Evalue=4e-57, Organism=Saccharomyces cerevisiae, GI6324059, Length=451, Percent_Identity=35.0332594235033, Blast_Score=206, Evalue=7e-54, Organism=Saccharomyces cerevisiae, GI6322892, Length=443, Percent_Identity=33.8600451467269, Blast_Score=206, Evalue=7e-54, Organism=Saccharomyces cerevisiae, GI6324553, Length=392, Percent_Identity=33.6734693877551, Blast_Score=202, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6319824, Length=407, Percent_Identity=31.6953316953317, Blast_Score=199, Evalue=8e-52, Organism=Saccharomyces cerevisiae, GI6324990, Length=447, Percent_Identity=31.7673378076063, Blast_Score=196, Evalue=6e-51, Organism=Saccharomyces cerevisiae, GI6321629, Length=401, Percent_Identity=30.6733167082294, Blast_Score=187, Evalue=4e-48, Organism=Saccharomyces cerevisiae, GI6321053, Length=424, Percent_Identity=31.8396226415094, Blast_Score=186, Evalue=8e-48, Organism=Saccharomyces cerevisiae, GI6319608, Length=460, Percent_Identity=30.6521739130435, Blast_Score=184, Evalue=3e-47, Organism=Saccharomyces cerevisiae, GI6322967, Length=434, Percent_Identity=29.4930875576037, Blast_Score=177, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6320717, Length=407, Percent_Identity=28.2555282555283, Blast_Score=175, Evalue=1e-44, Organism=Saccharomyces cerevisiae, GI6324981, Length=440, Percent_Identity=30.2272727272727, Blast_Score=165, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6320251, Length=406, Percent_Identity=27.3399014778325, Blast_Score=155, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6319543, Length=402, Percent_Identity=28.8557213930348, Blast_Score=155, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6319542, Length=402, Percent_Identity=27.6119402985075, Blast_Score=148, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6320364, Length=475, Percent_Identity=24.4210526315789, Blast_Score=113, Evalue=6e-26, Organism=Drosophila melanogaster, GI24667468, Length=423, Percent_Identity=24.5862884160757, Blast_Score=79, Evalue=5e-15, Organism=Drosophila melanogaster, GI161077963, Length=187, Percent_Identity=31.0160427807487, Blast_Score=76, Evalue=6e-14, Organism=Drosophila melanogaster, GI24666159, Length=301, Percent_Identity=22.2591362126246, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI221512776, Length=301, Percent_Identity=22.2591362126246, Blast_Score=69, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 - InterPro: IPR004840 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 49706; Mature: 49575
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: PS00218 AMINO_ACID_PERMEASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDSQHISTTLERGLKNRHIQLIALGGAVGTGLFLGIGPAIQLAGPAVLLGYAIGGAIAF CCCCHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHH LIMRQLGEMVVQEPVAGSFAHFAHKYWGPFAGFVSGWNYWVMFVLVGMAELTAAGIYMQY HHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEE WWPDVPTWMWASLFFVLINALNMVNVRLYGETEFWFALIKVAAILGMIVFGSWLLLSGDA ECCCCCHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEECCC GPQAGLANLWVHGGFLPHGWGGLIMAMAVIMFSFGGLELIGITAAEASEPEKSIPKATNQ CCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHCCHHHHH VVYRILIFYIGSLLVLLALYPWSQIGASSSPFVMIFHHLNSNTVAAVLNVVILTAALSVY HHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHH NSCVYSNSRMLYGLSLQGNAPRRLTRVNRRGIPVWSIGLSGLTTSLVILINYLMPGKAFG HHHHCCCCCEEEEEEECCCCCHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHCCCHHHH LLMALVVSTLVINWVMICMAHLKFRAVQNRLGVTARFRALWYPYGNYLCLAFLGLILVIM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEECCCCHHHHHHHHHHHHHHH VLTPGIRISVLLLPLWLGVLWGGFCLARMRRGKSA HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure GDSQHISTTLERGLKNRHIQLIALGGAVGTGLFLGIGPAIQLAGPAVLLGYAIGGAIAF CCCHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHH LIMRQLGEMVVQEPVAGSFAHFAHKYWGPFAGFVSGWNYWVMFVLVGMAELTAAGIYMQY HHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEE WWPDVPTWMWASLFFVLINALNMVNVRLYGETEFWFALIKVAAILGMIVFGSWLLLSGDA ECCCCCHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEECCC GPQAGLANLWVHGGFLPHGWGGLIMAMAVIMFSFGGLELIGITAAEASEPEKSIPKATNQ CCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHCCHHHHH VVYRILIFYIGSLLVLLALYPWSQIGASSSPFVMIFHHLNSNTVAAVLNVVILTAALSVY HHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHH NSCVYSNSRMLYGLSLQGNAPRRLTRVNRRGIPVWSIGLSGLTTSLVILINYLMPGKAFG HHHHCCCCCEEEEEEECCCCCHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHCCCHHHH LLMALVVSTLVINWVMICMAHLKFRAVQNRLGVTARFRALWYPYGNYLCLAFLGLILVIM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEECCCCHHHHHHHHHHHHHHH VLTPGIRISVLLLPLWLGVLWGGFCLARMRRGKSA HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; L-phenylalanine [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-phenylalanine [Periplasm] = Proton [Cytoplasm] + L-phenylalanine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1711024; 8905232; 9278503; 8626334 [H]