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The map label for this gene is yceB [H]

Identifier: 238919483

GI number: 238919483

Start: 1540380

End: 1540943

Strand: Reverse

Name: yceB [H]

Synonym: NT01EI_1579

Alternate gene names: 238919483

Gene position: 1540943-1540380 (Counterclockwise)

Preceding gene: 238919484

Following gene: 238919480

Centisome position: 40.42

GC content: 56.56

Gene sequence:

>564_bases
ATGAGAAAACTATGGTTTACCGCTGCAGTTCTGGCCGCCGGTCTGGTGCTGACTGCTTGCAATAAGCTGACCAGCTACAG
CATCAGCGAGCAGCAGATCAACACCTACCTGGATAAGCACAGCCAATTTGAAAAACAGATCGGAGTCCCCGGCCTGGTCG
ATGCCCGCATCACGCTGAATCAGCTCAGCAGCCAGATTGGCCGCAGTGAGCCCAATACCATTACGCTGAGCGGCCACGCC
AACGTCGCCATCAGCTCCATTCTGGGCCCCCAACAAAGCGAACTGCAGCTGACGCTGCGCGCCAAGCCGGTATACCAGCG
CGATGAAGGCGCCATCTATCTGCGCGATTTAACCCTGGTGGACTATAAGGTGCAGCCGGAAAAAATGGAGACGCTGATGA
AAGCGCTGGTACCTTACCTGAACCAGTCCCTGCGCAGCTATTTTGATCAACAGCCGGCCTATGTTCTCAACCCGGAGAAG
AGTAAGACCGAGGCTATTGCCCGTAAGCTGGCCAAAGGGCTGGAGGTGAAGCCCGGTGAGCTGGTGATCCCGCTGACCGA
CTGA

Upstream 100 bases:

>100_bases
CGTGGCGCTTCATCCCGTTACAGTGGTTTTTCCCCGCGGTTATCTGTGTCACAATCAACGTTTTATGTATCGGGTTGTTC
CCGTCGCCGAGGCTTTATTC

Downstream 100 bases:

>100_bases
TCTCAGGTCATGCAGCGCATCCCCTGCAGTAAAACGGCGCCATATGGCGCCGTTTTTTGTCTCTGCCCCCGGTACTGCGG
GGGATATCGATTACCCCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MRKLWFTAAVLAAGLVLTACNKLTSYSISEQQINTYLDKHSQFEKQIGVPGLVDARITLNQLSSQIGRSEPNTITLSGHA
NVAISSILGPQQSELQLTLRAKPVYQRDEGAIYLRDLTLVDYKVQPEKMETLMKALVPYLNQSLRSYFDQQPAYVLNPEK
SKTEAIARKLAKGLEVKPGELVIPLTD

Sequences:

>Translated_187_residues
MRKLWFTAAVLAAGLVLTACNKLTSYSISEQQINTYLDKHSQFEKQIGVPGLVDARITLNQLSSQIGRSEPNTITLSGHA
NVAISSILGPQQSELQLTLRAKPVYQRDEGAIYLRDLTLVDYKVQPEKMETLMKALVPYLNQSLRSYFDQQPAYVLNPEK
SKTEAIARKLAKGLEVKPGELVIPLTD
>Mature_187_residues
MRKLWFTAAVLAAGLVLTACNKLTSYSISEQQINTYLDKHSQFEKQIGVPGLVDARITLNQLSSQIGRSEPNTITLSGHA
NVAISSILGPQQSELQLTLRAKPVYQRDEGAIYLRDLTLVDYKVQPEKMETLMKALVPYLNQSLRSYFDQQPAYVLNPEK
SKTEAIARKLAKGLEVKPGELVIPLTD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787302, Length=187, Percent_Identity=55.6149732620321, Blast_Score=233, Evalue=8e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010835 [H]

Pfam domain/function: PF07273 DUF1439 [H]

EC number: NA

Molecular weight: Translated: 20816; Mature: 20816

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLWFTAAVLAAGLVLTACNKLTSYSISEQQINTYLDKHSQFEKQIGVPGLVDARITLN
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHH
QLSSQIGRSEPNTITLSGHANVAISSILGPQQSELQLTLRAKPVYQRDEGAIYLRDLTLV
HHHHHHCCCCCCEEEEECCCCCHHHHHCCCCCCCEEEEEECCCCEECCCCEEEEEEEEEE
DYKVQPEKMETLMKALVPYLNQSLRSYFDQQPAYVLNPEKSKTEAIARKLAKGLEVKPGE
EEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHCCCCCCCC
LVIPLTD
EEEEECC
>Mature Secondary Structure
MRKLWFTAAVLAAGLVLTACNKLTSYSISEQQINTYLDKHSQFEKQIGVPGLVDARITLN
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHH
QLSSQIGRSEPNTITLSGHANVAISSILGPQQSELQLTLRAKPVYQRDEGAIYLRDLTLV
HHHHHHCCCCCCEEEEECCCCCHHHHHCCCCCCCEEEEEECCCCEECCCCEEEEEEEEEE
DYKVQPEKMETLMKALVPYLNQSLRSYFDQQPAYVLNPEKSKTEAIARKLAKGLEVKPGE
EEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHCCCCCCCC
LVIPLTD
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2876892; 8905232; 9278503 [H]